Conservation of cofitness between CSW01_09275 and CSW01_02825 in Vibrio cholerae E7946 ATCC 55056

75 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09275 hypothetical protein 1.0 CSW01_02825 protein-L-isoaspartate O-methyltransferase 0.52 14
Klebsiella pneumoniae MKP103 0.45 KDGMDA_24515 YchJ family protein 0.65 KDGMDA_03230 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 95
Klebsiella michiganensis M5al 0.44 BWI76_RS17285 hypothetical protein 0.66 BWI76_RS22655 protein-L-isoaspartate O-methyltransferase low > 92
Dickeya dadantii 3937 0.44 DDA3937_RS10330 YchJ family protein 0.66 DDA3937_RS16885 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 74
Dickeya dianthicola ME23 0.43 DZA65_RS10815 YchJ family protein 0.66 DZA65_RS18030 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 75
Dickeya dianthicola 67-19 0.43 HGI48_RS10340 YchJ family protein 0.66 HGI48_RS16955 protein-L-isoaspartate(D-aspartate) O-methyltransferase — —
Erwinia amylovora T8 0.42 OLJFJH_13280 YchJ family protein 0.63 OLJFJH_09370 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 58
Escherichia coli ECRC99 0.42 KEDOAH_25570 ychJ YchJ family protein 0.65 KEDOAH_07655 pcm protein-L-isoaspartate O-methyltransferase — —
Escherichia coli Nissle 1917 0.42 ECOLIN_RS07465 YchJ family protein 0.64 ECOLIN_RS15340 protein-L-isoaspartate O-methyltransferase — —
Escherichia coli ECRC62 0.42 BNILDI_18630 ychJ YchJ family protein 0.65 BNILDI_10850 pcm protein-L-isoaspartate O-methyltransferase low > 75
Escherichia coli BL21 0.42 ECD_01209 UPF0225 family protein 0.65 ECD_02593 L-isoaspartate protein carboxylmethyltransferase type II low > 61
Escherichia coli ECRC100 0.42 OKFHMN_28575 ychJ YchJ family protein 0.65 OKFHMN_20485 pcm protein-L-isoaspartate O-methyltransferase low > 79
Escherichia coli ECRC102 0.42 NIAGMN_27660 ychJ YchJ family protein 0.65 NIAGMN_18255 pcm protein-L-isoaspartate O-methyltransferase low > 80
Escherichia coli ECOR38 0.42 HEPCGN_25035 ychJ YchJ family protein 0.65 HEPCGN_19665 pcm protein-L-isoaspartate O-methyltransferase low > 88
Escherichia coli ECRC98 0.42 JDDGAC_06000 ychJ YchJ family protein 0.65 JDDGAC_24150 pcm protein-L-isoaspartate O-methyltransferase low > 87
Pectobacterium carotovorum WPP14 0.42 HER17_RS11060 YchJ family protein 0.68 HER17_RS04340 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_02452 hypothetical protein 0.65 OHPLBJKB_00990 Protein-L-isoaspartate O-methyltransferase low > 74
Escherichia coli ECRC101 0.42 MCAODC_21685 ychJ YchJ family protein 0.65 MCAODC_11010 pcm protein-L-isoaspartate O-methyltransferase low > 87
Escherichia coli BW25113 0.42 b1233 ychJ hypothetical protein (NCBI) 0.65 b2743 pcm protein-L-isoaspartate O-methyltransferase (NCBI) low > 76
Enterobacter sp. TBS_079 0.42 MPMX20_02595 hypothetical protein 0.65 MPMX20_03629 Protein-L-isoaspartate O-methyltransferase low > 85
Escherichia coli ECOR27 0.42 NOLOHH_20475 ychJ YchJ family protein 0.65 NOLOHH_12300 pcm protein-L-isoaspartate O-methyltransferase low > 76
Serratia liquefaciens MT49 0.41 IAI46_14260 YchJ family protein 0.66 IAI46_03780 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 87
Escherichia fergusonii Becca 0.41 EFB2_02693 hypothetical protein 0.65 EFB2_01167 Protein-L-isoaspartate O-methyltransferase low > 86
Enterobacter asburiae PDN3 0.41 EX28DRAFT_0859 Uncharacterized protein conserved in bacteria 0.65 EX28DRAFT_2839 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 76
Kangiella aquimarina DSM 16071 0.37 B158DRAFT_1196 Uncharacterized protein conserved in bacteria 0.51 B158DRAFT_2297 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 40
Shewanella oneidensis MR-1 0.37 SO2497 conserved hypothetical protein (NCBI ptt file) 0.59 SO3434 pcm protein-L-isoaspartate O-methyltransferase (NCBI ptt file) low > 76
Pantoea sp. MT58 0.37 IAI47_09015 YchJ family protein 0.63 IAI47_04225 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 76
Shewanella sp. ANA-3 0.37 Shewana3_2159 SecC motif-containing protein (RefSeq) 0.60 Shewana3_1122 protein-L-isoaspartate O-methyltransferase (RefSeq) low > 73
Erwinia tracheiphila SCR3 0.36 LU632_RS12935 YchJ family protein 0.62 LU632_RS06470 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 73
Erwinia tracheiphila HP pepo 2.2 0.36 IJEDHG_22675 YchJ family protein 0.62 IJEDHG_17490 pcm protein-L-isoaspartate(D-aspartate) O-methyltransferase — —
Rahnella sp. WP5 0.35 EX31_RS10110 YchJ family protein 0.67 EX31_RS07835 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 89
Azospirillum brasilense Sp245 0.34 AZOBR_RS20310 hypothetical protein 0.42 AZOBR_RS15455 protein-L-isoaspartate O-methyltransferase low > 97
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_2949 UPF0225 protein YchJ 0.53 Pf6N2E2_3039 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) low > 103
Pseudomonas sp. RS175 0.34 PFR28_00514 hypothetical protein 0.53 PFR28_00425 Protein-L-isoaspartate O-methyltransferase low > 88
Pantoea agglomerans CFBP13505 P0401 0.34 PagCFBP13505_RS02855 YchJ family protein 0.66 PagCFBP13505_RS16740 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 74
Pseudomonas segetis P6 0.33 MPMX49_03505 hypothetical protein 0.52 MPMX49_03431 Protein-L-isoaspartate O-methyltransferase low > 75
Pseudomonas sp. DMC3 0.33 GFF2154 hypothetical protein 0.53 GFF2082 Protein-L-isoaspartate O-methyltransferase low > 89
Pseudomonas sp. S08-1 0.32 OH686_04855 UPF0225 protein YchJ 0.53 OH686_18175 protein-L-isoaspartate O-methyltransferase low > 80
Pseudomonas stutzeri RCH2 0.32 Psest_2861 Uncharacterized protein conserved in bacteria 0.54 Psest_2809 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 67
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_4631 UPF0225 protein YchJ 0.53 PfGW456L13_4677 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) low > 87
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_3187 UPF0225 protein YchJ 0.52 Pf1N1B4_3113 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) low > 87
Pseudomonas orientalis W4I3 0.32 QF045_RS09290 YchJ family protein 0.53 QF045_RS09200 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 93
Shewanella amazonensis SB2B 0.32 Sama_1820 metal-binding protein (RefSeq) 0.59 Sama_1042 protein-L-isoaspartate(D-aspartate) O-methyltransferase (RefSeq) low > 62
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_05460 hypothetical protein 0.53 AO356_05895 protein-L-isoaspartate O-methyltransferase low > 104
Pseudomonas simiae WCS417 0.32 PS417_06485 hypothetical protein 0.54 PS417_06355 protein-L-isoaspartate O-methyltransferase low > 88
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_16995 hypothetical protein 0.52 AO353_16605 protein-L-isoaspartate O-methyltransferase low > 101
Pseudomonas aeruginosa PUPa3 0.31 DQ20_RS45520 YchJ family protein 0.53 DQ20_RS42270 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 101
Pseudomonas aeruginosa MRSN321 0.31 DY961_RS07265 YchJ family protein 0.53 DY961_RS14855 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 100
Pseudomonas lactucae CFBP13502 0.31 GEMAOFIL_01459 hypothetical protein 0.54 GEMAOFIL_01441 Protein-L-isoaspartate O-methyltransferase low > 96
Magnetospirillum magneticum AMB-1 0.31 AMB_RS00035 hypothetical protein 0.43 AMB_RS12670 protein-L-isoaspartate O-methyltransferase low > 64
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_3863 SEC-C motif protein 0.53 Psyr_1372 Protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_3863 SEC-C motif protein 0.53 Psyr_1372 Protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 86
Pseudomonas putida KT2440 0.31 PP_1119 conserved protein of unknown function 0.51 PP_1621 Protein-L-isoaspartate O-methyltransferase low > 96
Pseudomonas aeruginosa PA14 0.31 IKLFDK_04750 YchJ family protein 0.53 IKLFDK_18505 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 98
Pseudomonas fluorescens SBW25 0.31 PFLU_RS06515 YchJ family protein 0.54 PFLU_RS06420 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS06515 YchJ family protein 0.54 PFLU_RS06420 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 109
Pseudomonas sp. BP01 0.31 JOY50_RS24110 YchJ family protein 0.51 JOY50_RS23745 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 84
Pseudomonas sp. SVBP6 0.31 COO64_RS16985 YchJ family protein 0.51 COO64_RS19785 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.28 92
Shewanella loihica PV-4 0.31 Shew_2056 SecC motif-containing protein (RefSeq) 0.61 Shew_1211 protein-L-isoaspartate O-methyltransferase (RefSeq) — —
Desulfovibrio vulgaris Hildenborough JW710 0.31 DVU0242 SEC-C motif domain protein (TIGR) 0.38 DVU1849 pcm protein-L-isoaspartate O-methyltransferase (TIGR) low > 55
Rhodospirillum rubrum S1H 0.30 Rru_A1982 SEC-C domain protein (NCBI) 0.44 Rru_A1768 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (NCBI) low > 58
Cellulophaga baltica 18 0.29 M666_RS05800 YchJ family metal-binding protein 0.38 M666_RS17580 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 67
Alteromonas macleodii MIT1002 0.26 MIT1002_02313 SEC-C motif 0.62 MIT1002_00628 Protein-L-isoaspartate O-methyltransferase low > 70
Pedobacter sp. GW460-11-11-14-LB5 0.26 CA265_RS14360 preprotein translocase subunit SecA 0.35 CA265_RS10925 protein-L-isoaspartate O-methyltransferase — —
Rhodanobacter sp. FW510-T8 0.24 OKGIIK_12900 ychJ UPF0225 protein XHC_4340 0.45 OKGIIK_08110 pcm protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 53
Rhodanobacter denitrificans FW104-10B01 0.24 LRK54_RS10980 hypothetical protein 0.44 LRK54_RS16655 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 59
Rhodanobacter denitrificans MT42 0.24 LRK55_RS10685 YchJ family metal-binding protein 0.44 LRK55_RS16380 protein-L-isoaspartate(D-aspartate) O-methyltransferase — —
Desulfovibrio vulgaris Miyazaki F 0.23 DvMF_2228 SEC-C motif domain protein (RefSeq) 0.41 DvMF_0412 protein-L-isoaspartate O-methyltransferase (RefSeq) low > 51
Rhodanobacter sp000427505 FW510-R12 0.23 LRK53_RS03770 hypothetical protein 0.46 LRK53_RS12265 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 59
Lysobacter sp. OAE881 0.23 ABIE51_RS00530 YchJ family protein 0.42 ABIE51_RS06490 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 62
Rhodopseudomonas palustris CGA009 0.23 TX73_016105 YchJ family metal-binding protein 0.36 TX73_001955 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 86
Dyella japonica UNC79MFTsu3.2 0.23 ABZR86_RS16820 YchJ family metal-binding protein 0.44 ABZR86_RS06590 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 74
Dechlorosoma suillum PS 0.22 Dsui_2325 hypothetical protein 0.45 Dsui_1969 protein-L-isoaspartate and D-aspartate O-methyltransferase low > 51
Variovorax sp. OAS795 0.18 ABID97_RS25230 YchJ family metal-binding protein 0.34 ABID97_RS10720 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 91
Paraburkholderia bryophila 376MFSha3.1 0.17 H281DRAFT_02092 SEC-C motif-containing protein 0.40 H281DRAFT_00842 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 103
Variovorax sp. SCN45 0.16 GFF1999 GTG start codon 0.34 GFF2844 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) — —

Not shown: 12 genomes with orthologs for CSW01_09275 only; 20 genomes with orthologs for CSW01_02825 only