Conservation of cofitness between CSW01_00065 and CSW01_02825 in Vibrio cholerae E7946 ATCC 55056

76 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00065 DNA replication and repair protein RecF 1.0 CSW01_02825 protein-L-isoaspartate O-methyltransferase 0.66 10
Erwinia amylovora T8 0.57 OLJFJH_05150 DNA replication/repair protein RecF 0.63 OLJFJH_09370 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.44 44
Pantoea sp. MT58 0.56 IAI47_00015 DNA replication/repair protein RecF 0.63 IAI47_04225 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 76
Serratia liquefaciens MT49 0.56 IAI46_00015 DNA replication/repair protein RecF 0.66 IAI46_03780 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 86
Rahnella sp. WP5 0.55 EX31_RS05975 DNA replication/repair protein RecF 0.67 EX31_RS07835 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 89
Erwinia tracheiphila SCR3 0.55 LU632_RS00015 recF DNA replication/repair protein RecF 0.62 LU632_RS06470 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 74
Escherichia coli ECRC100 0.55 OKFHMN_15025 recF DNA replication/repair protein RecF 0.65 OKFHMN_20485 pcm protein-L-isoaspartate O-methyltransferase low > 80
Dickeya dadantii 3937 0.55 DDA3937_RS21285 DNA replication/repair protein RecF 0.66 DDA3937_RS16885 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 74
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_00003 DNA replication and repair protein RecF 0.65 OHPLBJKB_00990 Protein-L-isoaspartate O-methyltransferase low > 73
Escherichia coli ECRC102 0.55 NIAGMN_12780 recF DNA replication/repair protein RecF 0.65 NIAGMN_18255 pcm protein-L-isoaspartate O-methyltransferase — —
Escherichia coli Nissle 1917 0.55 ECOLIN_RS21310 DNA replication/repair protein RecF 0.64 ECOLIN_RS15340 protein-L-isoaspartate O-methyltransferase low > 55
Escherichia coli ECRC62 0.55 BNILDI_04365 recF DNA replication/repair protein RecF 0.65 BNILDI_10850 pcm protein-L-isoaspartate O-methyltransferase low > 75
Escherichia coli BL21 0.55 ECD_03583 gap repair protein 0.65 ECD_02593 L-isoaspartate protein carboxylmethyltransferase type II low > 61
Pectobacterium carotovorum WPP14 0.55 HER17_RS00015 DNA replication/repair protein RecF 0.68 HER17_RS04340 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 75
Escherichia coli ECOR27 0.55 NOLOHH_07165 recF DNA replication/repair protein RecF 0.65 NOLOHH_12300 pcm protein-L-isoaspartate O-methyltransferase low > 75
Escherichia coli ECRC101 0.55 MCAODC_05535 recF DNA replication/repair protein RecF 0.65 MCAODC_11010 pcm protein-L-isoaspartate O-methyltransferase low > 87
Escherichia coli BW25113 0.55 b3700 recF recombination protein F (NCBI) 0.65 b2743 pcm protein-L-isoaspartate O-methyltransferase (NCBI) low > 76
Escherichia coli ECRC99 0.55 KEDOAH_13125 recF DNA replication/repair protein RecF 0.65 KEDOAH_07655 pcm protein-L-isoaspartate O-methyltransferase — —
Escherichia coli ECOR38 0.55 HEPCGN_13720 recF DNA replication/repair protein RecF 0.65 HEPCGN_19665 pcm protein-L-isoaspartate O-methyltransferase low > 87
Escherichia fergusonii Becca 0.55 EFB2_00003 DNA replication and repair protein RecF 0.65 EFB2_01167 Protein-L-isoaspartate O-methyltransferase low > 86
Escherichia coli ECRC98 0.55 JDDGAC_18645 recF DNA replication/repair protein RecF 0.65 JDDGAC_24150 pcm protein-L-isoaspartate O-methyltransferase low > 86
Dickeya dianthicola 67-19 0.55 HGI48_RS00015 DNA replication/repair protein RecF 0.66 HGI48_RS16955 protein-L-isoaspartate(D-aspartate) O-methyltransferase — —
Dickeya dianthicola ME23 0.55 DZA65_RS00015 DNA replication/repair protein RecF 0.66 DZA65_RS18030 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF1756 DNA recombination and repair protein RecF 0.65 GFF4791 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) low > 78
Klebsiella michiganensis M5al 0.54 BWI76_RS00010 DNA replication and repair protein RecF 0.66 BWI76_RS22655 protein-L-isoaspartate O-methyltransferase low > 92
Enterobacter sp. TBS_079 0.54 MPMX20_00003 DNA replication and repair protein RecF 0.65 MPMX20_03629 Protein-L-isoaspartate O-methyltransferase low > 85
Enterobacter asburiae PDN3 0.54 EX28DRAFT_3987 DNA replication and repair protein RecF 0.65 EX28DRAFT_2839 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.65 44
Shewanella loihica PV-4 0.46 Shew_0003 DNA replication and repair protein RecF (RefSeq) 0.61 Shew_1211 protein-L-isoaspartate O-methyltransferase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.45 SO0010 recF DNA replication and repair protein RecF (NCBI ptt file) 0.59 SO3434 pcm protein-L-isoaspartate O-methyltransferase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.45 Shewana3_0011 recF recombination protein F (RefSeq) 0.60 Shewana3_1122 protein-L-isoaspartate O-methyltransferase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.44 Sama_0015 recF recombination protein F (RefSeq) 0.59 Sama_1042 protein-L-isoaspartate(D-aspartate) O-methyltransferase (RefSeq) low > 62
Pseudomonas aeruginosa PA14 0.38 IKLFDK_25545 DNA replication/repair protein RecF 0.53 IKLFDK_18505 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 101
Pseudomonas sp. S08-1 0.38 OH686_12620 DNA recombination and repair protein RecF 0.53 OH686_18175 protein-L-isoaspartate O-methyltransferase low > 80
Pseudomonas stutzeri RCH2 0.38 Psest_0004 recF protein 0.54 Psest_2809 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 67
Pseudomonas fluorescens FW300-N1B4 0.38 Pf1N1B4_1927 DNA recombination and repair protein RecF 0.52 Pf1N1B4_3113 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) low > 87
Pseudomonas sp. RS175 0.38 PFR28_04593 DNA replication and repair protein RecF 0.53 PFR28_00425 Protein-L-isoaspartate O-methyltransferase 0.51 7
Pseudomonas sp. BP01 0.38 JOY50_RS08340 recF DNA replication/repair protein RecF 0.51 JOY50_RS23745 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 84
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_0003 DNA replication and repair protein RecF 0.53 Psyr_1372 Protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 86
Pseudomonas sp. DMC3 0.38 GFF578 DNA replication and repair protein RecF 0.53 GFF2082 Protein-L-isoaspartate O-methyltransferase low > 89
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_0003 DNA replication and repair protein RecF 0.53 Psyr_1372 Protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.24 67
Pseudomonas fluorescens FW300-N2C3 0.37 AO356_11635 recombinase RecF 0.53 AO356_05895 protein-L-isoaspartate O-methyltransferase low > 104
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_10480 recombinase RecF 0.52 AO353_16605 protein-L-isoaspartate O-methyltransferase low > 101
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS00015 DNA replication/repair protein RecF 0.54 PFLU_RS06420 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.22 59
Pseudomonas fluorescens SBW25 0.37 PFLU_RS00015 DNA replication/repair protein RecF 0.54 PFLU_RS06420 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 109
Pseudomonas sp. SVBP6 0.37 COO64_RS02120 recF DNA replication/repair protein RecF 0.51 COO64_RS19785 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 93
Pseudomonas putida KT2440 0.37 PP_0012 DNA replication and repair protein 0.51 PP_1621 Protein-L-isoaspartate O-methyltransferase low > 96
Pseudomonas simiae WCS417 0.37 PS417_00015 recombinase RecF 0.54 PS417_06355 protein-L-isoaspartate O-methyltransferase low > 88
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_664 DNA recombination and repair protein RecF 0.53 PfGW456L13_4677 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) low > 87
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_4197 DNA recombination and repair protein RecF 0.53 Pf6N2E2_3039 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) low > 103
Alteromonas macleodii MIT1002 0.35 MIT1002_00003 DNA replication and repair protein RecF 0.62 MIT1002_00628 Protein-L-isoaspartate O-methyltransferase low > 70
Kangiella aquimarina DSM 16071 0.32 B158DRAFT_0366 DNA replication and repair protein RecF 0.51 B158DRAFT_2297 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 40
Marinobacter adhaerens HP15 0.29 HP15_3705 DNA replication and repair protein recF 0.52 HP15_1280 protein-L-isoaspartate (D-aspartate) O-methyltransferase low > 73
Lysobacter sp. OAE881 0.25 ABIE51_RS00765 DNA replication/repair protein RecF 0.42 ABIE51_RS06490 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 62
Dyella japonica UNC79MFTsu3.2 0.25 ABZR86_RS15145 DNA replication/repair protein RecF 0.44 ABZR86_RS06590 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 74
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.4.1 DNA recombination and repair protein RecF 0.43 Xcc-8004.3130.1 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) low > 74
Rhodanobacter denitrificans MT42 0.25 LRK55_RS08240 DNA replication/repair protein RecF 0.44 LRK55_RS16380 protein-L-isoaspartate(D-aspartate) O-methyltransferase — —
Rhodanobacter denitrificans FW104-10B01 0.25 LRK54_RS08475 DNA replication/repair protein RecF 0.44 LRK54_RS16655 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 59
Rhodanobacter sp000427505 FW510-R12 0.25 LRK53_RS00015 DNA replication/repair protein RecF 0.46 LRK53_RS12265 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 60
Rhodanobacter sp. FW510-T8 0.23 OKGIIK_15255 recF DNA replication/repair protein RecF 0.45 OKGIIK_08110 pcm protein-L-isoaspartate(D-aspartate) O-methyltransferase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.16 ABZR88_RS21650 DNA replication/repair protein RecF 0.36 ABZR88_RS00725 protein-L-isoaspartate(D-aspartate) O-methyltransferase — —
Pedobacter sp. GW460-11-11-14-LB5 0.16 CA265_RS24760 DNA replication and repair protein RecF 0.35 CA265_RS10925 protein-L-isoaspartate O-methyltransferase — —
Rhizobium sp. OAE497 0.15 ABIE40_RS00200 DNA replication/repair protein RecF 0.32 ABIE40_RS08485 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 107
Cellulophaga baltica 18 0.15 M666_RS11055 DNA replication and repair protein RecF 0.38 M666_RS17580 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.50 56
Bosea sp. OAE506 0.14 ABIE41_RS04170 DNA replication/repair protein RecF 0.22 ABIE41_RS15020 protein-L-isoaspartate O-methyltransferase low > 77
Agrobacterium fabrum C58 0.14 Atu0073 recF-like protein 0.29 Atu1701 protein-L-isoaspartate O-methyltransferase low > 89
Echinicola vietnamensis KMM 6221, DSM 17526 0.14 Echvi_1156 recF protein 0.38 Echvi_3721 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 79
Sphingomonas koreensis DSMZ 15582 0.13 Ga0059261_2727 DNA replication and repair protein RecF 0.13 Ga0059261_0639 Protein-L-isoaspartate carboxylmethyltransferase — —
Azospirillum sp. SherDot2 0.13 MPMX19_02716 DNA replication and repair protein RecF 0.44 MPMX19_01168 Protein-L-isoaspartate O-methyltransferase — —
Rhodopseudomonas palustris CGA009 0.12 TX73_000015 DNA replication/repair protein RecF 0.36 TX73_001955 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 86
Phaeobacter inhibens DSM 17395 0.12 PGA1_c00030 DNA replication and repair protein RecF 0.38 PGA1_c10760 protein-L-isoaspartate O-methyltransferase Pcm — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.12 CA264_17475 DNA replication and repair protein RecF 0.39 CA264_06105 protein-L-isoaspartate O-methyltransferase low > 74
Dinoroseobacter shibae DFL-12 0.12 Dshi_3375 SMC domain protein (RefSeq) 0.39 Dshi_2137 protein-L-isoaspartate O-methyltransferase (RefSeq) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.12 A4249_RS15360 DNA replication/repair protein RecF 0.44 A4249_RS04650 protein-L-isoaspartate(D-aspartate) O-methyltransferase — —
Azospirillum brasilense Sp245 0.11 AZOBR_RS17670 recombinase RecF 0.42 AZOBR_RS15455 protein-L-isoaspartate O-methyltransferase low > 97
Xanthobacter sp. DMC5 0.11 GFF3876 DNA replication and repair protein RecF 0.42 GFF631 Protein-L-isoaspartate O-methyltransferase — —
Magnetospirillum magneticum AMB-1 0.11 AMB_RS03285 DNA replication and repair protein RecF 0.43 AMB_RS12670 protein-L-isoaspartate O-methyltransferase — —
Rhodospirillum rubrum S1H 0.11 Rru_A0003 RecF protein (NCBI) 0.44 Rru_A1768 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (NCBI) — —

Not shown: 13 genomes with orthologs for CSW01_00065 only; 11 genomes with orthologs for CSW01_02825 only