Conservation of cofitness between CSW01_07995 and CSW01_02820 in Vibrio cholerae E7946 ATCC 55056

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07995 galactose-1-epimerase 1.0 CSW01_02820 5'-nucleotidase SurE 0.48 8
Serratia liquefaciens MT49 0.49 IAI46_06420 galactose-1-epimerase 0.53 IAI46_03775 5'/3'-nucleotidase SurE low > 86
Klebsiella michiganensis M5al 0.49 BWI76_RS08610 galactose-1-epimerase 0.52 BWI76_RS22660 5'/3'-nucleotidase SurE low > 92
Erwinia tracheiphila SCR3 0.48 LU632_RS15915 galM galactose-1-epimerase 0.50 LU632_RS06465 surE 5'/3'-nucleotidase SurE low > 74
Escherichia coli ECRC99 0.48 KEDOAH_21235 galM galactose-1-epimerase 0.52 KEDOAH_07660 surE 5'/3'-nucleotidase SurE — —
Escherichia coli ECRC101 0.48 MCAODC_25950 galM galactose-1-epimerase 0.52 MCAODC_11005 surE 5'/3'-nucleotidase SurE low > 87
Escherichia coli ECRC98 0.48 JDDGAC_10385 galM galactose-1-epimerase 0.52 JDDGAC_24145 surE 5'/3'-nucleotidase SurE low > 86
Escherichia coli Nissle 1917 0.48 ECOLIN_RS04025 galactose-1-epimerase 0.52 ECOLIN_RS15345 5'/3'-nucleotidase SurE low > 55
Escherichia fergusonii Becca 0.48 EFB2_03350 Aldose 1-epimerase 0.52 EFB2_01166 5'/3'-nucleotidase SurE low > 86
Escherichia coli ECRC102 0.48 NIAGMN_04780 galM galactose-1-epimerase 0.52 NIAGMN_18250 surE 5'/3'-nucleotidase SurE — —
Escherichia coli ECRC100 0.48 OKFHMN_06730 galM galactose-1-epimerase 0.52 OKFHMN_20480 surE 5'/3'-nucleotidase SurE low > 80
Escherichia coli ECOR38 0.48 HEPCGN_01545 galM galactose-1-epimerase 0.52 HEPCGN_19660 surE 5'/3'-nucleotidase SurE low > 87
Escherichia coli ECOR27 0.48 NOLOHH_23160 galM galactose-1-epimerase 0.52 NOLOHH_12295 surE 5'/3'-nucleotidase SurE low > 75
Escherichia coli BW25113 0.48 b0756 galM galactose-1-epimerase (mutarotase) (NCBI) 0.52 b2744 surE acid phosphatase (NCBI) low > 76
Escherichia coli ECRC62 0.48 BNILDI_21155 galM galactose-1-epimerase 0.52 BNILDI_10845 surE 5'/3'-nucleotidase SurE low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_02957 Aldose 1-epimerase 0.52 OHPLBJKB_00989 '5'/3'-nucleotidase SurE' transl_table=11 low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF649 Aldose 1-epimerase (EC 5.1.3.3) 0.50 GFF4792 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) low > 78
Enterobacter sp. TBS_079 0.48 MPMX20_01383 Aldose 1-epimerase 0.51 MPMX20_03630 5'/3'-nucleotidase SurE low > 85
Enterobacter asburiae PDN3 0.47 EX28DRAFT_2239 galactose mutarotase 0.50 EX28DRAFT_2840 3'-nucleotidase (EC 3.1.3.6)/5'-nucleotidase (EC 3.1.3.5)/exopolyphosphatase (EC 3.6.1.11) low > 76
Rahnella sp. WP5 0.47 EX31_RS23565 galactose-1-epimerase 0.52 EX31_RS07840 5'/3'-nucleotidase SurE low > 89
Pantoea sp. MT58 0.45 IAI47_13595 galactose-1-epimerase 0.52 IAI47_04220 5'/3'-nucleotidase SurE low > 76
Erwinia amylovora T8 0.44 OLJFJH_16830 galactose-1-epimerase 0.52 OLJFJH_09365 5'/3'-nucleotidase SurE low > 58
Pedobacter sp. GW460-11-11-14-LB5 0.36 CA265_RS08330 galactose-1-epimerase 0.34 CA265_RS16310 5'/3'-nucleotidase SurE low > 88
Mucilaginibacter yixingensis YX-36 DSM 26809 0.35 ABZR88_RS04930 aldose epimerase family protein 0.35 ABZR88_RS03555 5'/3'-nucleotidase SurE — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.35 CA264_09120 galactose-1-epimerase 0.31 CA264_12185 5'/3'-nucleotidase SurE low > 74
Parabacteroides merdae CL09T00C40 0.33 HMPREF1078_RS08705 aldose epimerase family protein 0.28 HMPREF1078_RS04545 5'/3'-nucleotidase SurE low > 61
Echinicola vietnamensis KMM 6221, DSM 17526 0.33 Echvi_0697 Aldose 1-epimerase (EC 5.1.3.3) (from data) 0.30 Echvi_3388 5'/3'-nucleotidase SurE low > 79
Rhodanobacter sp. FW510-T8 0.33 OKGIIK_12490 Aldose 1-epimerase 0.53 OKGIIK_08115 surE 5'/3'-nucleotidase SurE low > 52
Phocaeicola vulgatus CL09T03C04 0.32 HMPREF1058_RS15655 galactose mutarotase 0.30 HMPREF1058_RS14085 5'/3'-nucleotidase SurE low > 67
Bacteroides thetaiotaomicron VPI-5482 0.32 BT2849 aldose 1-epimerase precursor (NCBI ptt file) 0.28 BT4003 stationary-phase survival protein SurE (NCBI ptt file) low > 81
Pseudomonas sp. RS175 0.32 PFR28_01305 Aldose 1-epimerase 0.43 PFR28_00424 '5'-nucleotidase SurE' transl_table=11 low > 88
Phocaeicola dorei CL03T12C01 0.32 ABI39_RS11645 galactose mutarotase 0.30 ABI39_RS09735 5'/3'-nucleotidase SurE low > 72
Bacteroides ovatus ATCC 8483 0.32 BACOVA_01720 aldose 1-epimerase 0.27 BACOVA_04822 5'/3'-nucleotidase SurE low > 94
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS01235 aldose epimerase family protein 0.52 ABZR86_RS06595 5'/3'-nucleotidase SurE low > 74
Variovorax sp. OAS795 0.31 ABID97_RS06780 aldose epimerase family protein 0.43 ABID97_RS10715 5'/3'-nucleotidase SurE low > 91
Bacteroides stercoris CC31F 0.31 HMPREF1181_RS08540 galactose-1-epimerase 0.26 HMPREF1181_RS09175 5'/3'-nucleotidase SurE low > 56
Paraburkholderia bryophila 376MFSha3.1 0.31 H281DRAFT_03874 aldose 1-epimerase (EC 5.1.3.3) 0.46 H281DRAFT_00840 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase low > 103
Caulobacter crescentus NA1000 Δfur 0.31 CCNA_01485 aldose 1-epimerase 0.36 CCNA_02077 5'(3')-nucleotidase/polyphosphatase SurE low > 67
Caulobacter crescentus NA1000 0.31 CCNA_01485 aldose 1-epimerase 0.36 CCNA_02077 5'(3')-nucleotidase/polyphosphatase SurE low > 66
Pseudomonas fluorescens FW300-N2C3 0.30 AO356_01315 aldose epimerase 0.45 AO356_05900 stationary phase survival protein SurE low > 104
Herbaspirillum seropedicae SmR1 0.30 HSERO_RS22450 aldose 1-epimerase 0.48 HSERO_RS14845 stationary phase survival protein SurE low > 78
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_2369 aldose 1-epimerase 0.46 Psyr_1371 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase low > 86
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_2369 aldose 1-epimerase 0.46 Psyr_1371 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase low > 86
Pseudomonas fluorescens SBW25-INTG 0.30 PFLU_RS11665 galactose mutarotase 0.49 PFLU_RS06415 5'/3'-nucleotidase SurE low > 109
Pseudomonas simiae WCS417 0.30 PS417_11040 aldose epimerase 0.48 PS417_06350 stationary phase survival protein SurE low > 88
Pseudomonas fluorescens SBW25 0.30 PFLU_RS11665 galactose mutarotase 0.49 PFLU_RS06415 5'/3'-nucleotidase SurE low > 109
Pseudomonas fluorescens FW300-N1B4 0.30 Pf1N1B4_84 Aldose 1-epimerase (EC 5.1.3.3) 0.48 Pf1N1B4_3112 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) low > 87
Pseudomonas fluorescens FW300-N2E2 0.30 Pf6N2E2_2135 Aldose 1-epimerase (EC 5.1.3.3) 0.44 Pf6N2E2_3040 5-nucleotidase SurE (EC 3.1.3.5) low > 103
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS18210 aldose epimerase family protein 0.46 ABZR87_RS10860 5'/3'-nucleotidase SurE — —
Lysobacter sp. OAE881 0.30 ABIE51_RS10905 aldose epimerase family protein 0.49 ABIE51_RS06485 5'/3'-nucleotidase SurE low > 62
Pseudomonas sp. DMC3 0.30 GFF1407 Aldose 1-epimerase 0.46 GFF2081 5'-nucleotidase SurE low > 89
Burkholderia phytofirmans PsJN 0.29 BPHYT_RS32835 aldose 1-epimerase 0.45 BPHYT_RS09100 stationary phase survival protein SurE — —
Paraburkholderia sabiae LMG 24235 0.29 QEN71_RS25885 aldose epimerase family protein 0.46 QEN71_RS22255 5'/3'-nucleotidase SurE low > 153
Sinorhizobium meliloti 1021 0.28 SMc03798 aldose 1-epimerase 0.32 SMc02063 stationary phase survival protein SurE — —
Agrobacterium fabrum C58 0.28 Atu2719 aldose epimerase 0.31 Atu1702 stationary-phase survival protein low > 89
Shewanella oneidensis MR-1 0.28 SO0693 galM aldose 1-epimerase (NCBI ptt file) 0.55 SO3435 surE stationary-phase survival protein SurE (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.28 Shewana3_3579 Aldose 1-epimerase (EC 5.1.3.3) (from data) 0.55 Shewana3_1121 surE stationary phase survival protein SurE (RefSeq) low > 73
Variovorax sp. SCN45 0.27 GFF5187 Aldose 1-epimerase (EC 5.1.3.3) 0.42 GFF2845 5'-nucleotidase SurE (EC 3.1.3.5) low > 127
Shewanella amazonensis SB2B 0.27 Sama_0535 Aldose 1-epimerase (EC 5.1.3.3) (from data) 0.54 Sama_1041 surE stationary phase survival protein SurE (RefSeq) low > 62
Azospirillum sp. SherDot2 0.27 MPMX19_06214 Aldose 1-epimerase 0.36 MPMX19_01169 5'-nucleotidase SurE low > 112
Rhizobium sp. OAE497 0.26 ABIE40_RS18585 aldose epimerase family protein 0.31 ABIE40_RS08480 5'/3'-nucleotidase SurE low > 107
Xanthomonas campestris pv. campestris strain 8004 0.26 Xcc-8004.3776.1 Aldose 1-epimerase (EC 5.1.3.3) 0.50 Xcc-8004.3131.1 hypothetical protein low > 74
Cellulophaga baltica 18 0.25 M666_RS09860 galactose mutarotase 0.35 M666_RS02410 5'/3'-nucleotidase SurE low > 67
Shewanella loihica PV-4 0.25 Shew_3272 Aldose 1-epimerase (EC 5.1.3.3) (from data) 0.53 Shew_1210 stationary-phase survival protein SurE (RefSeq) low > 60
Azospirillum brasilense Sp245 0.23 AZOBR_RS31270 aldose 1-epimerase 0.38 AZOBR_RS15460 5'-nucleotidase low > 97
Phaeobacter inhibens DSM 17395 0.22 PGA1_262p00390 aldose 1-epimerase 0.24 PGA1_c10770 5'-nucleotidase SurE low > 62
Hydrogenophaga sp. GW460-11-11-14-LB1 0.18 GFF791 Aldose 1-epimerase (EC 5.1.3.3) 0.44 GFF3879 5-nucleotidase SurE (EC 3.1.3.5) low > 90
Acidovorax sp. GW101-3H11 0.16 Ac3H11_3951 Aldose 1-epimerase (EC 5.1.3.3) 0.41 Ac3H11_1784 5-nucleotidase SurE (EC 3.1.3.5) low > 79
Dinoroseobacter shibae DFL-12 0.16 Dshi_2683 Aldose 1-epimerase (RefSeq) 0.25 Dshi_2136 stationary-phase survival protein SurE (RefSeq) low > 64

Not shown: 6 genomes with orthologs for CSW01_07995 only; 37 genomes with orthologs for CSW01_02820 only