Conservation of cofitness between CSW01_03680 and CSW01_01810 in Vibrio cholerae E7946 ATCC 55056

79 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03680 bifunctional chorismate mutase/prephenate dehydratase 1.0 CSW01_01810 tRNA epoxyqueuosine(34) reductase QueG 0.66 15
Alteromonas macleodii MIT1002 0.57 MIT1002_01316 P-protein 0.63 MIT1002_03794 Epoxyqueuosine reductase low > 70
Pectobacterium carotovorum WPP14 0.55 HER17_RS05385 bifunctional chorismate mutase/prephenate dehydratase 0.68 HER17_RS02555 tRNA epoxyqueuosine(34) reductase QueG low > 75
Dickeya dianthicola ME23 0.55 DZA65_RS17345 bifunctional chorismate mutase/prephenate dehydratase 0.68 DZA65_RS19710 tRNA epoxyqueuosine(34) reductase QueG low > 75
Dickeya dianthicola 67-19 0.55 HGI48_RS16250 bifunctional chorismate mutase/prephenate dehydratase 0.68 HGI48_RS18575 tRNA epoxyqueuosine(34) reductase QueG low > 71
Dickeya dadantii 3937 0.55 DDA3937_RS16130 bifunctional chorismate mutase/prephenate dehydratase 0.69 DDA3937_RS18645 tRNA epoxyqueuosine(34) reductase QueG low > 74
Enterobacter sp. TBS_079 0.55 MPMX20_03466 Bifunctional chorismate mutase/prephenate dehydratase 0.65 MPMX20_00447 Epoxyqueuosine reductase low > 85
Enterobacter asburiae PDN3 0.54 EX28DRAFT_2699 chorismate mutase (EC 5.4.99.5) 0.66 EX28DRAFT_3363 epoxyqueuosine reductase low > 76
Pantoea agglomerans CFBP13505 P0401 0.53 PagCFBP13505_RS16555 bifunctional chorismate mutase/prephenate dehydratase 0.70 PagCFBP13505_RS11155 tRNA epoxyqueuosine(34) reductase QueG low > 74
Pantoea sp. MT58 0.53 IAI47_04410 bifunctional chorismate mutase/prephenate dehydratase 0.70 IAI47_02560 tRNA epoxyqueuosine(34) reductase QueG low > 76
Klebsiella pneumoniae MKP103 0.53 KDGMDA_02160 bifunctional chorismate mutase/prephenate dehydratase 0.66 KDGMDA_11005 tRNA epoxyqueuosine(34) reductase QueG low > 95
Serratia liquefaciens MT49 0.53 IAI46_03965 bifunctional chorismate mutase/prephenate dehydratase 0.67 IAI46_01595 tRNA epoxyqueuosine(34) reductase QueG low > 87
Escherichia coli ECRC100 0.52 OKFHMN_21225 pheA bifunctional chorismate mutase/prephenate dehydratase 0.67 OKFHMN_12285 queG tRNA epoxyqueuosine(34) reductase QueG low > 79
Escherichia coli BW25113 0.52 b2599 pheA fused chorismate mutase P/prephenate dehydratase (NCBI) 0.67 b4166 yjeS predicted Fe-S electron transport protein (NCBI) low > 76
Escherichia coli BL21 0.52 ECD_02488 chorismate mutase and prephenate dehydratase, P-protein 0.67 ECD_04033 epoxyqueuosine reductase, cobalamine-stimulated; queosine biosynthesis low > 61
Escherichia coli Nissle 1917 0.52 ECOLIN_RS14695 bifunctional chorismate mutase/prephenate dehydratase 0.67 ECOLIN_RS24200 tRNA epoxyqueuosine(34) reductase QueG low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_01109 P-protein 0.67 OHPLBJKB_03876 Epoxyqueuosine reductase low > 74
Escherichia coli ECRC62 0.52 BNILDI_11705 pheA bifunctional chorismate mutase/prephenate dehydratase 0.67 BNILDI_06940 queG tRNA epoxyqueuosine(34) reductase QueG low > 75
Escherichia coli ECOR27 0.52 NOLOHH_12900 pheA bifunctional chorismate mutase/prephenate dehydratase 0.67 NOLOHH_04550 queG tRNA epoxyqueuosine(34) reductase QueG low > 76
Escherichia coli ECRC99 0.52 KEDOAH_06995 pheA bifunctional chorismate mutase/prephenate dehydratase 0.67 KEDOAH_15870 queG tRNA epoxyqueuosine(34) reductase QueG — —
Escherichia coli ECRC101 0.52 MCAODC_11755 pheA bifunctional chorismate mutase/prephenate dehydratase 0.67 MCAODC_02800 queG tRNA epoxyqueuosine(34) reductase QueG low > 87
Escherichia coli ECOR38 0.52 HEPCGN_20345 pheA bifunctional chorismate mutase/prephenate dehydratase 0.67 HEPCGN_10515 queG tRNA epoxyqueuosine(34) reductase QueG low > 88
Escherichia coli ECRC102 0.52 NIAGMN_18995 pheA bifunctional chorismate mutase/prephenate dehydratase 0.67 NIAGMN_10135 queG tRNA epoxyqueuosine(34) reductase QueG low > 80
Escherichia coli ECRC98 0.52 JDDGAC_24890 pheA bifunctional chorismate mutase/prephenate dehydratase 0.67 JDDGAC_15925 queG tRNA epoxyqueuosine(34) reductase QueG low > 87
Escherichia fergusonii Becca 0.52 EFB2_01293 Bifunctional chorismate mutase/prephenate dehydratase 0.67 EFB2_04369 Epoxyqueuosine reductase low > 86
Klebsiella michiganensis M5al 0.52 BWI76_RS21465 bifunctional chorismate mutase/prephenate dehydratase 0.66 BWI76_RS02505 tRNA epoxyqueuosine(34) reductase QueG low > 92
Rahnella sp. WP5 0.51 EX31_RS07585 bifunctional chorismate mutase/prephenate dehydratase 0.66 EX31_RS08850 tRNA epoxyqueuosine(34) reductase QueG low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.49 GFF4179 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.67 GFF819 Epoxyqueuosine (oQ) reductase QueG low > 78
Kangiella aquimarina DSM 16071 0.35 B158DRAFT_1385 Prephenate dehydratase 0.48 B158DRAFT_0486 iron-sulfur cluster binding protein, putative low > 40
Methylophilus sp. DMC18 0.25 GFF665 Bifunctional chorismate mutase/prephenate dehydratase 0.52 GFF1249 Epoxyqueuosine reductase — —
Herbaspirillum seropedicae SmR1 0.24 HSERO_RS18430 chorismate mutase 0.52 HSERO_RS04220 epoxyqueuosine reductase low > 78
Paraburkholderia sabiae LMG 24235 0.24 QEN71_RS04070 prephenate dehydratase 0.49 QEN71_RS02745 tRNA epoxyqueuosine(34) reductase QueG low > 153
Burkholderia phytofirmans PsJN 0.23 BPHYT_RS14910 chorismate mutase 0.50 BPHYT_RS15960 iron-sulfur cluster binding protein low > 109
Rhodanobacter denitrificans MT42 0.23 LRK55_RS00135 prephenate dehydratase 0.53 LRK55_RS14845 tRNA epoxyqueuosine(34) reductase QueG low > 63
Rhodanobacter denitrificans FW104-10B01 0.23 LRK54_RS00395 prephenate dehydratase 0.53 LRK54_RS15130 tRNA epoxyqueuosine(34) reductase QueG low > 59
Paraburkholderia bryophila 376MFSha3.1 0.23 H281DRAFT_03925 chorismate mutase 0.50 H281DRAFT_04128 epoxyqueuosine reductase low > 103
Rhodanobacter sp000427505 FW510-R12 0.23 LRK53_RS09755 prephenate dehydratase 0.54 LRK53_RS13485 tRNA epoxyqueuosine(34) reductase QueG low > 59
Xanthomonas campestris pv. campestris strain 8004 0.22 Xcc-8004.3282.1 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.50 Xcc-8004.2252.1 Epoxyqueuosine (oQ) reductase QueG low > 74
Castellaniella sp019104865 MT123 0.22 ABCV34_RS07110 prephenate dehydratase 0.48 ABCV34_RS13905 tRNA epoxyqueuosine(34) reductase QueG low > 48
Dyella japonica UNC79MFTsu3.2 0.22 ABZR86_RS02225 prephenate dehydratase 0.54 ABZR86_RS00835 tRNA epoxyqueuosine(34) reductase QueG low > 74
Acinetobacter radioresistens SK82 0.22 MPMX26_02021 Bifunctional chorismate mutase/prephenate dehydratase 0.47 MPMX26_01783 Epoxyqueuosine reductase low > 36
Marinobacter adhaerens HP15 0.22 HP15_1362 chorismate mutase / prephenate dehydratase 0.50 HP15_2505 iron-sulfur cluster binding protein — —
Paraburkholderia graminis OAS925 0.22 ABIE53_003157 chorismate mutase/prephenate dehydratase 0.50 ABIE53_003363 epoxyqueuosine reductase low > 113
Acinetobacter baumannii LAC-4 0.22 RR41_RS06210 prephenate dehydratase 0.46 RR41_RS11805 tRNA epoxyqueuosine(34) reductase QueG — —
Pseudomonas segetis P6 0.22 ACVTMO_RS14375 pheA prephenate dehydratase 0.55 ACVTMO_RS20630 queG tRNA epoxyqueuosine(34) reductase QueG — —
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS09450 prephenate dehydratase 0.50 ABZR87_RS00775 tRNA epoxyqueuosine(34) reductase QueG low > 80
Cupriavidus basilensis FW507-4G11 0.22 RR42_RS04460 chorismate mutase 0.48 RR42_RS03405 epoxyqueuosine reductase low > 128
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_03465 prephenate dehydratase 0.54 AO356_08685 epoxyqueuosine reductase — —
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_2520 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.54 Pf6N2E2_3620 Epoxyqueuosine (oQ) reductase QueG — —
Rhodanobacter sp. FW510-T8 0.21 OKGIIK_06915 pheA prephenate dehydratase 0.52 OKGIIK_03900 queG tRNA epoxyqueuosine(34) reductase QueG low > 53
Pseudomonas aeruginosa PUPa3 0.21 DQ20_RS34435 pheA;go_function=prephenate prephenate dehydratase 0.56 DQ20_RS51515 queG;go_function=4 tRNA epoxyqueuosine(34) reductase QueG — —
Pseudomonas aeruginosa PA14 0.21 IKLFDK_16090 3-phosphoserine/phosphohydroxythreonine transaminase 0.55 IKLFDK_28790 tRNA epoxyqueuosine(34) reductase QueG — —
Pseudomonas sp. RS175 0.21 PFR28_00907 Bifunctional chorismate mutase/prephenate dehydratase 0.54 PFR28_05115 Epoxyqueuosine reductase — —
Pseudomonas aeruginosa MRSN321 0.21 DY961_RS01110 pheA;go_function=prephenate prephenate dehydratase 0.55 DY961_RS10540 queG;go_function=4 tRNA epoxyqueuosine(34) reductase QueG — —
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_3645 prephenate dehydratase 0.56 Psyr_0566 4Fe-4S cluster binding protein — —
Ralstonia solanacearum IBSBF1503 0.21 RALBFv3_RS13760 chorismate mutase 0.49 RALBFv3_RS05120 tRNA epoxyqueuosine(34) reductase QueG low > 76
Pseudomonas orientalis W4I3 0.21 QF045_RS10845 prephenate dehydratase 0.54 QF045_RS05520 tRNA epoxyqueuosine(34) reductase QueG — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_3645 prephenate dehydratase 0.56 Psyr_0566 4Fe-4S cluster binding protein — —
Pseudomonas fluorescens FW300-N2E3 0.21 AO353_02070 prephenate dehydratase 0.54 AO353_13115 epoxyqueuosine reductase low > 101
Ralstonia solanacearum UW163 0.21 UW163_RS16050 chorismate mutase 0.49 UW163_RS08505 tRNA epoxyqueuosine(34) reductase QueG — —
Pseudomonas fluorescens GW456-L13 0.21 PfGW456L13_2176 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.54 PfGW456L13_160 Epoxyqueuosine (oQ) reductase QueG low > 87
Pseudomonas fluorescens SBW25 0.21 PFLU_RS08095 prephenate dehydratase 0.55 PFLU_RS02540 tRNA epoxyqueuosine(34) reductase QueG — —
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS08095 prephenate dehydratase 0.55 PFLU_RS02540 tRNA epoxyqueuosine(34) reductase QueG — —
Pseudomonas simiae WCS417 0.21 PS417_08125 prephenate dehydratase 0.54 PS417_02460 epoxyqueuosine reductase low > 88
Pseudomonas lactucae CFBP13502 0.21 GEMAOFIL_01761 Bifunctional chorismate mutase/prephenate dehydratase 0.54 GEMAOFIL_00730 Epoxyqueuosine reductase low > 96
Ralstonia solanacearum GMI1000 0.21 RS_RS04495 prephenate dehydratase 0.49 RS_RS12740 tRNA epoxyqueuosine(34) reductase QueG low > 80
Pseudomonas fluorescens FW300-N1B4 0.21 Pf1N1B4_350 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.54 Pf1N1B4_1418 Epoxyqueuosine (oQ) reductase QueG low > 87
Pseudomonas stutzeri RCH2 0.21 Psest_1984 chorismate mutase domain of proteobacterial P-protein, clade 2 0.57 Psest_0677 iron-sulfur cluster binding protein, putative — —
Ralstonia solanacearum PSI07 0.21 RPSI07_RS19710 prephenate dehydratase 0.49 RPSI07_RS12175 tRNA epoxyqueuosine(34) reductase QueG low > 81
Pseudomonas sp. S08-1 0.21 OH686_20870 Chorismate mutase I / Prephenate dehydratase 0.55 OH686_09500 epoxyqueuosine reductase low > 80
Pseudomonas sp. DMC3 0.21 GFF4677 Bifunctional chorismate mutase/prephenate dehydratase 0.55 GFF3214 Epoxyqueuosine reductase — —
Pseudomonas sp. SVBP6 0.21 COO64_RS06745 pheA prephenate dehydratase 0.54 COO64_RS17870 queG tRNA epoxyqueuosine(34) reductase QueG — —
Pseudomonas sp. BP01 0.21 JOY50_RS16140 pheA prephenate dehydratase 0.54 JOY50_RS17200 queG tRNA epoxyqueuosine(34) reductase QueG — —
Dechlorosoma suillum PS 0.21 Dsui_1940 chorismate mutase, clade 2 0.47 Dsui_3502 iron-sulfur cluster binding protein, putative — —
Pseudomonas putida KT2440 0.21 PP_1769 chorismate mutase/Prephenate dehydratase 0.54 PP_4900 epoxyqueuosine reductase — —
Variovorax sp. SCN45 0.20 GFF6182 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.47 GFF4805 Epoxyqueuosine reductase (EC 1.17.99.6) QueG low > 127
Variovorax sp. OAS795 0.20 ABID97_RS09515 prephenate dehydratase 0.49 ABID97_RS20285 tRNA epoxyqueuosine(34) reductase QueG — —
Lysobacter sp. OAE881 0.20 ABIE51_RS12145 prephenate dehydratase 0.51 ABIE51_RS08045 tRNA epoxyqueuosine(34) reductase QueG low > 62
Hydrogenophaga sp. GW460-11-11-14-LB1 0.20 GFF5343 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.49 GFF5474 Epoxyqueuosine (oQ) reductase QueG low > 90
Acidovorax sp. GW101-3H11 0.19 Ac3H11_2574 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.49 Ac3H11_306 Epoxyqueuosine (oQ) reductase QueG low > 79

Not shown: 5 genomes with orthologs for CSW01_03680 only; 24 genomes with orthologs for CSW01_01810 only