Conservation of cofitness between CSW01_08410 and CSW01_01480 in Vibrio cholerae E7946 ATCC 55056

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08410 AcrB/AcrD/AcrF family protein 1.0 CSW01_01480 phosphogluconate dehydratase 0.50 6
Shewanella amazonensis SB2B 0.59 Sama_0675 AcrB/AcrD/AcrF family transporter (RefSeq) 0.53 Sama_1810 phosphogluconate dehydratase (RefSeq) — —
Shewanella loihica PV-4 0.53 Shew_0466 acriflavin resistance protein (RefSeq) 0.54 Shew_2046 phosphogluconate dehydratase (RefSeq) — —
Shewanella sp. ANA-3 0.51 Shewana3_3572 acriflavin resistance protein (RefSeq) 0.54 Shewana3_2149 phosphogluconate dehydratase (RefSeq) low > 73
Rahnella sp. WP5 0.49 EX31_RS02985 efflux RND transporter permease subunit 0.54 EX31_RS16630 phosphogluconate dehydratase low > 89
Enterobacter asburiae PDN3 0.48 EX28DRAFT_0559 Cation/multidrug efflux pump 0.54 EX28DRAFT_0705 6-phosphogluconate dehydratase (EC 4.2.1.12) low > 76
Alteromonas macleodii MIT1002 0.48 MIT1002_01561 Swarming motility protein SwrC 0.52 MIT1002_02405 Phosphogluconate dehydratase low > 70
Klebsiella michiganensis M5al 0.47 BWI76_RS18515 multidrug transporter AcrB 0.53 BWI76_RS18100 phosphogluconate dehydratase low > 92
Pseudomonas stutzeri RCH2 0.39 Psest_0733 Cation/multidrug efflux pump 0.52 Psest_0849 6-phosphogluconate dehydratase low > 67
Phaeobacter inhibens DSM 17395 0.37 PGA1_c24610 integral membrane protein, AcrB/AcrD/AcrF family 0.49 PGA1_c28000 phosphogluconate dehydratase Edd — —
Azospirillum sp. SherDot2 0.30 MPMX19_05260 Cobalt-zinc-cadmium resistance protein CzcA 0.50 MPMX19_05118 Phosphogluconate dehydratase — —
Xanthobacter sp. DMC5 0.29 GFF4151 Nickel and cobalt resistance protein CnrA 0.46 GFF3887 Phosphogluconate dehydratase — —
Acidovorax sp. GW101-3H11 0.29 Ac3H11_933 Probable transmembrane drug efflux protein 0.48 Ac3H11_2082 Phosphogluconate dehydratase (EC 4.2.1.12) — —
Variovorax sp. SCN45 0.29 GFF493 RND efflux system, inner membrane transporter 0.47 GFF6513 Phosphogluconate dehydratase (EC 4.2.1.12) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.28 GFF4033 Probable transmembrane drug efflux protein 0.49 GFF5495 Phosphogluconate dehydratase (EC 4.2.1.12) — —
Cupriavidus basilensis FW507-4G11 0.28 RR42_RS07915 multidrug transporter AcrB 0.50 RR42_RS37440 phosphogluconate dehydratase low > 128
Variovorax sp. OAS795 0.28 ABID97_RS17615 efflux RND transporter permease subunit 0.49 ABID97_RS21300 phosphogluconate dehydratase low > 91
Ralstonia sp. UNC404CL21Col 0.28 ABZR87_RS13180 efflux RND transporter permease subunit 0.50 ABZR87_RS22920 phosphogluconate dehydratase low > 80
Ralstonia solanacearum UW163 0.28 UW163_RS14695 AcrB/AcrD/AcrF family protein 0.50 UW163_RS17125 phosphogluconate dehydratase — —
Ralstonia solanacearum IBSBF1503 0.28 RALBFv3_RS01385 AcrB/AcrD/AcrF family protein 0.50 RALBFv3_RS16385 phosphogluconate dehydratase low > 76
Ralstonia solanacearum GMI1000 0.28 RS_RS08335 AcrB/AcrD/AcrF family protein 0.50 RS_RS24620 phosphogluconate dehydratase low > 80
Ralstonia solanacearum PSI07 0.28 RPSI07_RS16100 AcrB/AcrD/AcrF family protein 0.50 RPSI07_RS07320 phosphogluconate dehydratase low > 81
Pseudomonas sp. RS175 0.27 PFR28_02359 Cobalt-zinc-cadmium resistance protein CzcA 0.51 PFR28_00561 Phosphogluconate dehydratase low > 88
Pseudomonas aeruginosa PUPa3 0.27 DQ20_RS42530 mexK;inference=COORDINATES multidrug efflux RND transporter permease subunit MexK 0.51 DQ20_RS40090 edd;go_function=phosphogluconate phosphogluconate dehydratase low > 101
Pseudomonas aeruginosa MRSN321 0.27 DY961_RS14595 mexK;inference=COORDINATES multidrug efflux RND transporter permease subunit MexK 0.51 DY961_RS00950 edd;go_function=phosphogluconate phosphogluconate dehydratase low > 100
Pseudomonas aeruginosa PA14 0.27 IKLFDK_18770 multidrug efflux RND transporter permease subunit MexK 0.51 IKLFDK_16230 phosphogluconate dehydratase — —
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_30 Cation efflux system protein 0.51 Pf1N1B4_601 Phosphogluconate dehydratase (EC 4.2.1.12) — —
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_0346 Acriflavin resistance protein 0.51 Psyr_1109 6-phosphogluconate dehydratase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_0346 Acriflavin resistance protein 0.51 Psyr_1109 6-phosphogluconate dehydratase low > 86
Pseudomonas putida KT2440 0.27 PP_1517 RND efflux transporter 0.51 PP_1010 phosphogluconate dehydratase — —
Paraburkholderia sabiae LMG 24235 0.27 QEN71_RS07190 efflux RND transporter permease subunit 0.48 QEN71_RS26920 phosphogluconate dehydratase low > 153
Pseudomonas sp. BP01 0.26 JOY50_RS26100 efflux RND transporter permease subunit 0.51 JOY50_RS11390 edd phosphogluconate dehydratase low > 84
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_16365 multidrug transporter AcrB 0.52 AO353_03420 phosphogluconate dehydratase low > 101
Lysobacter sp. OAE881 0.26 ABIE51_RS10090 efflux RND transporter permease subunit 0.45 ABIE51_RS01610 phosphogluconate dehydratase low > 62
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_27555 multidrug transporter 0.51 AO356_05220 phosphogluconate dehydratase — —
Burkholderia phytofirmans PsJN 0.26 BPHYT_RS11375 acriflavin resistance protein 0.49 BPHYT_RS16735 phosphogluconate dehydratase low > 109
Caulobacter crescentus NA1000 0.26 CCNA_01866 cation/multidrug efflux pump acrB4 0.47 CCNA_02134 phosphogluconate dehydratase low > 66
Caulobacter crescentus NA1000 Δfur 0.26 CCNA_01866 cation/multidrug efflux pump acrB4 0.47 CCNA_02134 phosphogluconate dehydratase low > 67
Paraburkholderia graminis OAS925 0.26 ABIE53_002354 multidrug efflux pump 0.49 ABIE53_003517 phosphogluconate dehydratase low > 113
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_4730 RND efflux transporter 0.51 PfGW456L13_1889 Phosphogluconate dehydratase (EC 4.2.1.12) low > 87
Xanthomonas campestris pv. campestris strain 8004 0.26 Xcc-8004.557.1 cation efflux system protein 0.49 Xcc-8004.2447.1 Phosphogluconate dehydratase (EC 4.2.1.12) low > 74
Paraburkholderia bryophila 376MFSha3.1 0.26 H281DRAFT_05197 Multidrug efflux pump subunit AcrB 0.49 H281DRAFT_04278 6-phosphogluconate dehydratase low > 103
Pseudomonas sp. S08-1 0.26 OH686_06740 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) 0.51 OH686_02490 phosphogluconate dehydratase low > 80
Agrobacterium fabrum C58 0.26 Atu3795 AcrB/AcrD/AcrF family protein 0.51 Atu0598 phosphogluconate dehydratase low > 89
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_3091 RND efflux transporter 0.51 Pf6N2E2_2898 Phosphogluconate dehydratase (EC 4.2.1.12) — —
Dyella japonica UNC79MFTsu3.2 0.26 ABZR86_RS20765 efflux RND transporter permease subunit 0.50 ABZR86_RS14690 phosphogluconate dehydratase low > 74
Herbaspirillum seropedicae SmR1 0.26 HSERO_RS01325 cation/multidrug efflux protein 0.49 HSERO_RS05520 phosphogluconate dehydratase — —
Pseudomonas simiae WCS417 0.26 PS417_06115 multidrug transporter AcrB 0.52 PS417_22690 phosphogluconate dehydratase low > 88
Pseudomonas sp. SVBP6 0.26 COO64_RS19550 efflux RND transporter permease subunit 0.51 COO64_RS04535 edd phosphogluconate dehydratase — —
Acinetobacter baumannii LAC-4 0.26 RR41_RS00170 efflux RND transporter permease subunit 0.50 RR41_RS16530 phosphogluconate dehydratase low > 55
Pseudomonas segetis P6 0.26 MPMX49_01634 Multidrug resistance protein MexB 0.51 MPMX49_02841 Phosphogluconate dehydratase — —
Methylophilus sp. DMC18 0.26 GFF2822 Multidrug resistance protein MexB 0.48 GFF285 Phosphogluconate dehydratase — —
Pseudomonas sp. DMC3 0.26 GFF2034 Nickel and cobalt resistance protein CnrA 0.51 GFF5152 Phosphogluconate dehydratase low > 89
Pseudomonas orientalis W4I3 0.26 QF045_RS08965 efflux RND transporter permease subunit 0.52 QF045_RS24860 phosphogluconate dehydratase low > 93
Pseudomonas fluorescens SBW25 0.26 PFLU_RS06185 efflux RND transporter permease subunit 0.52 PFLU_RS24330 phosphogluconate dehydratase low > 109
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS06185 efflux RND transporter permease subunit 0.52 PFLU_RS24330 phosphogluconate dehydratase low > 109
Pseudomonas lactucae CFBP13502 0.26 GEMAOFIL_01393 Multidrug export protein AcrF 0.52 GEMAOFIL_04692 Phosphogluconate dehydratase low > 96
Enterobacter sp. TBS_079 0.25 MPMX20_02160 Nickel and cobalt resistance protein CnrA 0.54 MPMX20_02756 Phosphogluconate dehydratase low > 85
Sphingobium sp. HT1-2 0.25 GFF4398 RND efflux system, inner membrane transporter 0.51 GFF1593 Phosphogluconate dehydratase (EC 4.2.1.12) low > 95
Klebsiella pneumoniae MKP103 0.25 KDGMDA_24195 MFS transporter 0.54 KDGMDA_25365 phosphogluconate dehydratase low > 95
Sinorhizobium meliloti 1021 0.24 SMa1884 Cation/multidrug efflux protein 0.49 SMc03068 phosphogluconate dehydratase low > 103
Marinobacter adhaerens HP15 0.23 HP15_1118 transporter, AcrB/D/F family 0.50 HP15_2174 6-phosphogluconate dehydratase low > 73

Not shown: 17 genomes with orthologs for CSW01_08410 only; 24 genomes with orthologs for CSW01_01480 only