Conservation of cofitness between CSW01_07835 and CSW01_01285 in Vibrio cholerae E7946 ATCC 55056

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07835 catalase-peroxidase 1.0 CSW01_01285 perosamine synthetase 0.98 4
Dechlorosoma suillum PS 0.85 Dsui_2233 catalase/peroxidase HPI 0.23 Dsui_1769 putative PLP-dependent enzyme possibly involved in cell wall biogenesis low > 51
Synechococcus elongatus PCC 7942 0.82 Synpcc7942_1656 katG catalase/peroxidase HPI 0.34 Synpcc7942_0056 rfbE perosamine synthetase low > 38
Shewanella amazonensis SB2B 0.82 Sama_3270 catalase (RefSeq) 0.27 Sama_2329 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis (RefSeq) low > 62
Pectobacterium carotovorum WPP14 0.80 HER17_RS09165 catalase/peroxidase HPI 0.24 HER17_RS06520 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 75
Methylophilus sp. DMC18 0.79 GFF2031 Catalase-peroxidase 0.22 GFF528 dTDP-3-amino-3,4,6-trideoxy-alpha-D-glucose transaminase low > 43
Shewanella sp. ANA-3 0.77 Shewana3_0306 catalase/peroxidase HPI (RefSeq) 0.23 Shewana3_1303 polysaccharide biosynthesis protein (RefSeq) low > 73
Bosea sp. OAE506 0.76 ABIE41_RS01200 catalase/peroxidase HPI 0.17 ABIE41_RS03045 dTDP-4-amino-4,6-dideoxygalactose transaminase low > 77
Marinobacter adhaerens HP15 0.76 HP15_1397 peroxidase/catalase HPI 0.23 HP15_2398 aminotransferase, DegT/DnrJ/EryC1/StrS family
Synechocystis sp000284455 PCC 6803 0.74 SGL_RS09095 catalase/peroxidase HPI 0.34 SGL_RS09505 DegT/DnrJ/EryC1/StrS family aminotransferase low > 52
Phaeobacter inhibens DSM 17395 0.72 PGA1_78p00050 peroxidase/catalase HPI 0.22 PGA1_c05070 putative pyridoxal-phosphate-dependent aminotransferase low > 62
Dyella japonica UNC79MFTsu3.2 0.63 ABZR86_RS00615 catalase/peroxidase HPI 0.18 ABZR86_RS18520 DegT/DnrJ/EryC1/StrS family aminotransferase low > 74
Dickeya dadantii 3937 0.62 DDA3937_RS07265 catalase/peroxidase HPI 0.26 DDA3937_RS21390 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 74
Dickeya dianthicola 67-19 0.62 HGI48_RS08090 catalase/peroxidase HPI 0.26 HGI48_RS21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 71
Ralstonia solanacearum PSI07 0.62 RPSI07_RS20110 catalase/peroxidase HPI 0.22 RPSI07_RS17515 DegT/DnrJ/EryC1/StrS aminotransferase family protein
Dickeya dianthicola ME23 0.62 DZA65_RS08685 catalase/peroxidase HPI 0.25 DZA65_RS22610 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 75
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_4208 heme catalase/peroxidase 0.23 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_4208 heme catalase/peroxidase 0.23 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase low > 86
Pseudomonas sp. DMC3 0.61 GFF1038 Catalase-peroxidase 0.21 GFF2433 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 89
Serratia liquefaciens MT49 0.61 IAI46_17030 catalase/peroxidase HPI 0.25 IAI46_11015 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 87
Mucilaginibacter yixingensis YX-36 DSM 26809 0.61 ABZR88_RS16460 catalase/peroxidase HPI 0.28 ABZR88_RS12735 DegT/DnrJ/EryC1/StrS aminotransferase family protein low > 71
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_07735 hydroperoxidase 0.22 AO356_03965 aminotransferase low > 104
Echinicola vietnamensis KMM 6221, DSM 17526 0.60 Echvi_1165 catalase/peroxidase HPI 0.24 Echvi_0062 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis low > 79
Pseudomonas sp. SVBP6 0.60 COO64_RS08175 katG catalase/peroxidase HPI 0.22 COO64_RS21480 vioA dTDP-4-amino-4,6-dideoxy-D-glucose aminotransferase VioA low > 93
Pseudomonas fluorescens FW300-N2E3 0.60 AO353_23210 hydroperoxidase 0.25 AO353_25530 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase low > 101
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_3430 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) 0.23 Pf6N2E2_2610 Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase low > 103
Variovorax sp. SCN45 0.60 GFF4692 Catalase-peroxidase KatG (EC 1.11.1.21) 0.22 GFF6876 Aminotransferase, DegT/DnrJ/EryC1/StrS family low > 127
Burkholderia phytofirmans PsJN 0.60 BPHYT_RS10310 catalase-peroxidase 0.21 BPHYT_RS08930 aminotransferase DegT
Paraburkholderia sabiae LMG 24235 0.59 QEN71_RS29740 catalase/peroxidase HPI 0.22 QEN71_RS29145 DegT/DnrJ/EryC1/StrS family aminotransferase low > 153
Cellulophaga baltica 18 0.59 M666_RS03625 catalase/peroxidase HPI 0.28 M666_RS12340 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme low > 67
Xanthomonas campestris pv. campestris strain 8004 0.59 Xcc-8004.3762.1 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) 0.22 Xcc-8004.2801.1 Aminotransferase, DegT/DnrJ/EryC1/StrS family low > 74
Pseudomonas fluorescens FW300-N1B4 0.58 Pf1N1B4_4230 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) 0.22 Pf1N1B4_3586 DegT/DnrJ/EryC1/StrS aminotransferase low > 87
Caulobacter crescentus NA1000 0.58 CCNA_03138 peroxidase/catalase katG 0.41 CCNA_01064 perosamine synthetase low > 66
Caulobacter crescentus NA1000 Δfur 0.58 CCNA_03138 peroxidase/catalase katG 0.41 CCNA_01064 perosamine synthetase low > 67
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS06245 catalase-peroxidase 0.27 HSERO_RS21000 aminotransferase DegT low > 78
Pseudomonas sp. BP01 0.58 JOY50_RS07970 katG catalase/peroxidase HPI 0.22 JOY50_RS13135 DegT/DnrJ/EryC1/StrS aminotransferase family protein low > 84
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS26270 hydroperoxidase 0.25 RR42_RS15735 pyridoxal phosphate-dependent aminotransferase low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.58 GFF637 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) 0.20 GFF1844 Aminotransferase low > 90
Ralstonia sp. UNC404CL21Col 0.57 ABZR87_RS01240 catalase/peroxidase HPI 0.36 ABZR87_RS22110 DegT/DnrJ/EryC1/StrS family aminotransferase low > 80
Sphingomonas koreensis DSMZ 15582 0.57 Ga0059261_3628 catalase/peroxidase HPI 0.20 Ga0059261_3110 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
Escherichia coli BL21 0.57 ECD_03828 catalase-peroxidase HPI, heme b-containing 0.24 ECD_01942 VioA, involved in dTDP-N-acetylviosamine synthesis
Escherichia fergusonii Becca 0.57 EFB2_04671 Catalase-peroxidase 0.23 EFB2_01603 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 86
Escherichia coli ECOR38 0.57 HEPCGN_12305 katG catalase/peroxidase HPI 0.24 HEPCGN_03130 vioA dTDP-4-amino-4,6-dideoxy-D-glucose aminotransferase VioA
Escherichia coli ECRC102 0.57 NIAGMN_11415 katG catalase/peroxidase HPI 0.54 NIAGMN_22375 rfbE GDP-perosamine synthase RfbE/PerA
Escherichia coli ECRC101 0.57 MCAODC_04160 katG catalase/peroxidase HPI 0.54 MCAODC_20510 rfbE GDP-perosamine synthase RfbE/PerA
Escherichia coli ECRC99 0.57 KEDOAH_14500 katG catalase/peroxidase HPI 0.54 KEDOAH_03720 rfbE GDP-perosamine synthase RfbE/PerA
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF2330 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) 0.25 GFF1858 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) low > 78
Escherichia coli ECRC98 0.57 JDDGAC_17285 katG catalase/peroxidase HPI 0.54 JDDGAC_28540 rfbE GDP-perosamine synthase RfbE/PerA low > 87
Escherichia coli ECRC100 0.57 OKFHMN_13660 katG catalase/peroxidase HPI 0.54 OKFHMN_24430 rfbE GDP-perosamine synthase RfbE/PerA low > 79
Escherichia coli ECOR27 0.57 NOLOHH_05805 katG catalase/peroxidase HPI 0.23 NOLOHH_14620 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 76
Escherichia coli Nissle 1917 0.57 ECOLIN_RS22765 catalase/peroxidase HPI 0.22 ECOLIN_RS13125 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 55
Escherichia coli ECRC62 0.57 BNILDI_05730 katG catalase/peroxidase HPI 0.22 BNILDI_13535 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 75
Escherichia coli BW25113 0.57 b3942 katG catalase/hydroperoxidase HPI(I) (NCBI) 0.22 b2253 arnB uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent (RefSeq) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_04108 Catalase-peroxidase 0.22 OHPLBJKB_01458 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 74
Enterobacter asburiae PDN3 0.57 EX28DRAFT_4414 catalase/peroxidase HPI 0.24 EX28DRAFT_4082 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis low > 76
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_00053 catalase-peroxidase 0.22 H281DRAFT_00805 dTDP-4-amino-4,6-dideoxygalactose transaminase
Brevundimonas sp. GW460-12-10-14-LB2 0.57 A4249_RS12750 catalase/peroxidase HPI 0.19 A4249_RS13795 DegT/DnrJ/EryC1/StrS aminotransferase family protein
Pedobacter sp. GW460-11-11-14-LB5 0.57 CA265_RS00900 catalase/peroxidase HPI 0.35 CA265_RS01760 aminotransferase DegT low > 88
Enterobacter sp. TBS_079 0.56 MPMX20_04528 Catalase-peroxidase 0.24 MPMX20_04380 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 85
Klebsiella pneumoniae MKP103 0.56 KDGMDA_22580 Catalase-peroxidase 0.24 KDGMDA_07345 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 95
Acinetobacter baumannii LAC-4 0.56 RR41_RS16940 catalase/peroxidase HPI 0.24 RR41_RS18630 LegC family aminotransferase
Pseudomonas stutzeri RCH2 0.55 Psest_2741 catalase/peroxidase HPI 0.22 Psest_1811 UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase
Klebsiella michiganensis M5al 0.55 BWI76_RS13925 catalase/peroxidase HPI 0.23 BWI76_RS26485 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 92
Erwinia tracheiphila SCR3 0.55 LU632_RS19500 katG catalase/peroxidase HPI 0.24 LU632_RS16495 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase
Erwinia tracheiphila HP pepo 2.2 0.55 IJEDHG_12560 katG catalase/peroxidase HPI 0.24 IJEDHG_02605 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase
Pantoea sp. MT58 0.54 IAI47_07215 catalase/peroxidase HPI 0.25 IAI47_21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 76
Erwinia amylovora T8 0.54 OLJFJH_12450 catalase/peroxidase HPI 0.24 OLJFJH_17365 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 58
Rahnella sp. WP5 0.54 EX31_RS11140 catalase/peroxidase HPI 0.24 EX31_RS14020 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 89
Pantoea agglomerans CFBP13505 P0401 0.54 PagCFBP13505_RS01335 catalase/peroxidase HPI 0.25 PagCFBP13505_RS12240 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 74
Alteromonas macleodii MIT1002 0.51 MIT1002_03345 Catalase-peroxidase 2 precursor 0.22 MIT1002_01078 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase low > 70
Shewanella loihica PV-4 0.51 Shew_0709 catalase/peroxidase HPI (RefSeq) 0.20 Shew_1319 DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq) low > 60

Not shown: 16 genomes with orthologs for CSW01_07835 only; 29 genomes with orthologs for CSW01_01285 only