Conservation of cofitness between CSW01_01175 and CSW01_01270 in Vibrio cholerae E7946 ATCC 55056

77 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01175 formamidopyrimidine-DNA glycosylase 1.0 CSW01_01270 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 0.71 15
Alteromonas macleodii MIT1002 0.62 MIT1002_00057 Formamidopyrimidine-DNA glycosylase 0.59 MIT1002_03581 Mannose-1-phosphate guanylyltransferase 1 low > 70
Enterobacter sp. TBS_079 0.61 MPMX20_00100 Formamidopyrimidine-DNA glycosylase 0.58 MPMX20_03031 Mannose-1-phosphate guanylyltransferase 1 low > 85
Escherichia coli ECRC101 0.60 MCAODC_06145 Formamidopyrimidine-DNA glycosylase 0.60 MCAODC_20575 manC mannose-1-phosphate guanylyltransferase ManC low > 88
Escherichia coli Nissle 1917 0.60 ECOLIN_RS20715 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.60 ECOLIN_RS12075 mannose-1-phosphate guanyltransferase low > 55
Pantoea agglomerans CFBP13505 P0401 0.60 PagCFBP13505_RS18710 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.61 PagCFBP13505_RS01105 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 74
Escherichia coli ECRC100 0.60 OKFHMN_15635 Formamidopyrimidine-DNA glycosylase 0.60 OKFHMN_24365 manC mannose-1-phosphate guanylyltransferase ManC low > 79
Escherichia coli ECRC102 0.60 NIAGMN_13395 Formamidopyrimidine-DNA glycosylase 0.60 NIAGMN_22310 manC mannose-1-phosphate guanylyltransferase ManC low > 80
Escherichia fergusonii Becca 0.60 EFB2_00178 Formamidopyrimidine-DNA glycosylase 0.60 EFB2_01805 Mannose-1-phosphate guanylyltransferase 1 low > 86
Rahnella sp. WP5 0.60 EX31_RS14455 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.59 EX31_RS02880 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 89
Escherichia coli ECRC99 0.60 KEDOAH_12515 Formamidopyrimidine-DNA glycosylase 0.60 KEDOAH_03785 manC mannose-1-phosphate guanylyltransferase ManC — —
Escherichia coli ECRC98 0.60 JDDGAC_19260 Formamidopyrimidine-DNA glycosylase 0.60 JDDGAC_28475 manC mannose-1-phosphate guanylyltransferase ManC low > 87
Escherichia coli BL21 0.60 ECD_03492 formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase 0.60 ECD_01955 mannose-1-phosphate guanyltransferase low > 61
Escherichia coli ECRC62 0.60 BNILDI_04000 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.60 BNILDI_14605 manC mannose-1-phosphate guanylyltransferase ManC low > 75
Escherichia coli BW25113 0.60 b3635 mutM formamidopyrimidine-DNA glycosylase (NCBI) 0.60 b2049 cpsB mannose-1-phosphate guanyltransferase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_00067 Formamidopyrimidine-DNA glycosylase 0.58 OHPLBJKB_01666 Mannose-1-phosphate guanylyltransferase 1 low > 74
Escherichia coli ECOR38 0.60 HEPCGN_14460 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.60 HEPCGN_03065 manC mannose-1-phosphate guanylyltransferase ManC low > 88
Escherichia coli ECOR27 0.60 NOLOHH_07515 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.60 NOLOHH_15695 manC mannose-1-phosphate guanylyltransferase ManC low > 76
Enterobacter asburiae PDN3 0.60 EX28DRAFT_3885 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) 0.58 EX28DRAFT_0506 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 76
Serratia liquefaciens MT49 0.59 IAI46_24810 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.61 IAI46_08070 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF374 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) 0.59 GFF3879 Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) / Mannose-6-phosphate isomerase (EC 5.3.1.8) low > 78
Dickeya dianthicola ME23 0.58 DZA65_RS00770 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.59 DZA65_RS19720 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 75
Dickeya dianthicola 67-19 0.58 HGI48_RS00715 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.59 HGI48_RS18585 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 71
Dickeya dadantii 3937 0.58 DDA3937_RS20500 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.59 DDA3937_RS18655 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 74
Pectobacterium carotovorum WPP14 0.57 HER17_RS20815 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.59 HER17_RS14525 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 75
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_4761 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase 0.59 Psyr_0937 mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP) low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_4761 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase 0.59 Psyr_0937 mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP) low > 86
Pseudomonas fluorescens FW300-N1B4 0.54 Pf1N1B4_2309 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) 0.54 Pf1N1B4_993 Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) / Mannose-6-phosphate isomerase (EC 5.3.1.8) low > 87
Rhodanobacter sp. FW510-T8 0.54 OKGIIK_13060 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.51 OKGIIK_01155 cpsB mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 52
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_979 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) 0.54 PfGW456L13_1674 Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) / Mannose-6-phosphate isomerase (EC 5.3.1.8) low > 87
Lysobacter sp. OAE881 0.53 ABIE51_RS00335 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.45 ABIE51_RS04370 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 62
Rhodanobacter denitrificans MT42 0.53 LRK55_RS10505 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.51 LRK55_RS05440 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 63
Pseudomonas aeruginosa PA14 0.53 IKLFDK_23650 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.53 IKLFDK_18125 phosphomannose isomerase / guanosine 5'-diphospho-D-mannose pyrophosphorylase low > 100
Pseudomonas sp. DMC3 0.53 GFF239 Formamidopyrimidine-DNA glycosylase 0.54 GFF1910 Alginate biosynthesis protein AlgA low > 89
Dyella japonica UNC79MFTsu3.2 0.53 ABZR86_RS13335 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.50 ABZR86_RS18715 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 74
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS10815 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.51 LRK54_RS05685 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 59
Pseudomonas sp. SVBP6 0.53 COO64_RS12835 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.53 COO64_RS11545 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 93
Pseudomonas fluorescens FW300-N2E3 0.53 AO353_08320 5-hydroxymethyluracil DNA glycosylase 0.53 AO353_04735 mannose-1-phosphate guanylyltransferase low > 101
Xanthomonas campestris pv. campestris strain 8004 0.53 Xcc-8004.5281.1 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) 0.54 Xcc-8004.4481.1 hypothetical protein low > 74
Pseudomonas segetis P6 0.53 MPMX49_04441 Formamidopyrimidine-DNA glycosylase 0.53 MPMX49_03577 Alginate biosynthesis protein AlgA low > 75
Pseudomonas sp. RS175 0.53 PFR28_04272 Formamidopyrimidine-DNA glycosylase 0.54 PFR28_03566 Alginate biosynthesis protein AlgA low > 88
Pseudomonas putida KT2440 0.53 PP_5125 Formamidopyrimidine-DNA glycosylase 0.54 PP_1277 mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase low > 96
Rhodanobacter sp000427505 FW510-R12 0.53 LRK53_RS03605 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.51 LRK53_RS04345 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase — —
Pseudomonas sp. BP01 0.52 JOY50_RS20760 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.53 JOY50_RS15405 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 84
Pseudomonas stutzeri RCH2 0.52 Psest_0239 formamidopyrimidine-DNA glycosylase (fpg) 0.63 Psest_1821 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 67
Pseudomonas simiae WCS417 0.51 PS417_26870 5-hydroxymethyluracil DNA glycosylase 0.53 PS417_04790 mannose-1-phosphate guanylyltransferase low > 88
Pseudomonas fluorescens SBW25-INTG 0.51 PFLU_RS28515 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.59 PFLU_RS17870 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 109
Pseudomonas fluorescens SBW25 0.51 PFLU_RS28515 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.59 PFLU_RS17870 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 109
Pseudomonas lactucae CFBP13502 0.51 GEMAOFIL_05511 Formamidopyrimidine-DNA glycosylase 0.56 GEMAOFIL_02614 Mannose-1-phosphate guanylyltransferase RfbM low > 93
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_4569 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) 0.54 Pf6N2E2_5377 Mannose-6-phosphate isomerase (EC 5.3.1.8) / Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) low > 103
Pseudomonas fluorescens FW300-N2C3 0.50 AO356_13270 5-hydroxymethyluracil DNA glycosylase 0.54 AO356_17260 mannose-1-phosphate guanylyltransferase low > 104
Marinobacter adhaerens HP15 0.49 HP15_3493 formamidopyrimidine-DNA glycosylase 0.59 HP15_444 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase — —
Pseudomonas sp. S08-1 0.49 OH686_14125 DNA-formamidopyrimidine glycosylase 0.52 OH686_02105 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 80
Methylophilus sp. DMC18 0.47 GFF1917 Formamidopyrimidine-DNA glycosylase 0.49 GFF703 Mannose-1-phosphate guanylyltransferase 1 — —
Paraburkholderia graminis OAS925 0.43 ABIE53_000711 formamidopyrimidine-DNA glycosylase 0.50 ABIE53_002179 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 113
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS19545 formamidopyrimidine-DNA glycosylase 0.50 HSERO_RS10000 mannose-1-phosphate guanylyltransferase low > 78
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS02870 formamidopyrimidine-DNA glycosylase 0.51 BPHYT_RS09705 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_01934 DNA-(apurinic or apyrimidinic site) lyase 0.56 H281DRAFT_04847 mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22)/mannose-6-phosphate isomerase, type 2 (EC 5.3.1.8) low > 103
Cupriavidus basilensis FW507-4G11 0.41 RR42_RS02040 formamidopyrimidine-DNA glycosylase 0.51 RR42_RS33245 mannose-1-phosphate guanyltransferase low > 128
Paraburkholderia sabiae LMG 24235 0.41 QEN71_RS01720 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.57 QEN71_RS25610 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 153
Ralstonia solanacearum PSI07 0.40 RPSI07_RS22175 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.39 RPSI07_RS19805 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 81
Castellaniella sp019104865 MT123 0.40 ABCV34_RS09265 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.46 ABCV34_RS12925 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 48
Dechlorosoma suillum PS 0.40 Dsui_1031 formamidopyrimidine-DNA glycosylase Fpg 0.41 Dsui_0087 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 51
Rhodospirillum rubrum S1H 0.39 Rru_A3799 DNA-formamidopyrimidine glycosylase (NCBI) 0.47 Rru_B0046 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (NCBI) low > 58
Dinoroseobacter shibae DFL-12 0.39 Dshi_3369 formamidopyrimidine-DNA glycosylase (RefSeq) 0.41 Dshi_1897 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (RefSeq) low > 64
Variovorax sp. SCN45 0.38 GFF2353 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) 0.43 GFF70 Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13) / Mannose-6-phosphate isomerase (EC 5.3.1.8) low > 127
Xanthobacter sp. DMC5 0.38 GFF2040 Formamidopyrimidine-DNA glycosylase 0.44 GFF1112 Alginate biosynthesis protein AlgA — —
Phaeobacter inhibens DSM 17395 0.38 PGA1_c36490 formamidopyrimidine-DNA glycosylase MutM 0.39 PGA1_65p00290 algA: alginate biosynthesis protein — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF825 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) 0.48 GFF90 Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) low > 90
Rhodopseudomonas palustris CGA009 0.35 TX73_000435 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.43 TX73_017175 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 86
Variovorax sp. OAS795 0.35 ABID97_RS23725 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.42 ABID97_RS19170 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 91
Azospirillum brasilense Sp245 0.34 AZOBR_RS01270 5-hydroxymethyluracil DNA glycosylase 0.52 AZOBR_RS33830 mannose-1-phosphate guanylyltransferase low > 97
Magnetospirillum magneticum AMB-1 0.34 AMB_RS03255 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.49 AMB_RS00190 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase — —
Agrobacterium fabrum C58 0.34 Atu0321 formamidopyrimidine-DNA glycosylase 0.41 Atu3353 mannose-1-phosphate guanylyltransferase low > 89
Rhizobium sp. OAE497 0.33 ABIE40_RS01590 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.41 ABIE40_RS14845 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 107
Azospirillum sp. SherDot2 0.32 MPMX19_02764 Formamidopyrimidine-DNA glycosylase 0.47 MPMX19_06734 Alginate biosynthesis protein AlgA low > 112
Synechococcus elongatus PCC 7942 0.30 Synpcc7942_1323 fpg DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase 0.57 Synpcc7942_1608 manC mannose-1-phosphate guanylyltransferase (GDP) — —
Bosea sp. OAE506 0.30 ABIE41_RS04205 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.42 ABIE41_RS03100 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase — —

Not shown: 25 genomes with orthologs for CSW01_01175 only; 2 genomes with orthologs for CSW01_01270 only