Conservation of cofitness between CCNA_02601 and CCNA_03594 in Caulobacter crescentus NA1000 Δfur

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Caulobacter crescentus NA1000 Δfur 1.0 CCNA_02601 glutathione-dependent formaldehyde dehydrogenase 1.0 CCNA_03594 SIR2 family protein 0.65 18
Caulobacter crescentus NA1000 1.00 CCNA_02601 glutathione-dependent formaldehyde dehydrogenase 1.00 CCNA_03594 SIR2 family protein low > 66
Rhodopseudomonas palustris CGA009 0.88 TX73_010080 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.17 TX73_013035 NAD-dependent protein deacetylase low > 86
Sphingomonas koreensis DSMZ 15582 0.87 Ga0059261_1819 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.45 Ga0059261_1943 NAD-dependent protein deacetylases, SIR2 family low > 68
Brevundimonas sp. GW460-12-10-14-LB2 0.85 A4249_RS00420 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.48 A4249_RS00415 NAD-dependent deacylase low > 48
Dinoroseobacter shibae DFL-12 0.77 Dshi_0103 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase (RefSeq) 0.51 Dshi_2612 Silent information regulator protein Sir2 (RefSeq) low > 64
Ralstonia solanacearum IBSBF1503 0.77 RALBFv3_RS12345 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.29 RALBFv3_RS15355 NAD-dependent deacylase low > 76
Ralstonia solanacearum UW163 0.77 UW163_RS01260 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.29 UW163_RS12820 NAD-dependent deacylase
Ralstonia solanacearum GMI1000 0.77 RS_RS17530 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.28 RS_RS06165 NAD-dependent deacylase low > 80
Ralstonia sp. UNC404CL21Col 0.76 ABZR87_RS08285 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.29 ABZR87_RS10995 NAD-dependent deacylase 0.44 21
Ralstonia solanacearum PSI07 0.76 RPSI07_RS20965 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.29 RPSI07_RS18020 NAD-dependent deacylase low > 81
Bosea sp. OAE506 0.76 ABIE41_RS09635 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.15 ABIE41_RS14930 Sir2 family NAD-dependent protein deacetylase low > 77
Cupriavidus basilensis FW507-4G11 0.75 RR42_RS25775 alcohol dehydrogenase 0.29 RR42_RS13055 NAD-dependent protein deacylase
Burkholderia phytofirmans PsJN 0.75 BPHYT_RS16150 alcohol dehydrogenase 0.20 BPHYT_RS29640 NAD-dependent deacetylase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.75 H281DRAFT_04166 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase 0.18 H281DRAFT_03044 NAD-dependent protein deacetylase, SIR2 family
Paraburkholderia graminis OAS925 0.75 ABIE53_003402 S-(hydroxymethyl)glutathione dehydrogenase/alcohol dehydrogenase 0.19 ABIE53_005120 NAD-dependent SIR2 family protein deacetylase low > 113
Paraburkholderia sabiae LMG 24235 0.74 QEN71_RS02555 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.19 QEN71_RS20510 NAD-dependent protein deacetylase low > 153
Variovorax sp. SCN45 0.74 GFF2941 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) 0.32 GFF7186 NAD-dependent protein deacetylase of SIR2 family low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.74 GFF3318 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) 0.23 GFF4837 NAD-dependent protein deacetylase of SIR2 family low > 90
Herbaspirillum seropedicae SmR1 0.72 HSERO_RS13615 alcohol dehydrogenase 0.16 HSERO_RS18330 NAD-dependent deacetylase low > 78
Azospirillum brasilense Sp245 0.69 AZOBR_RS16515 S-(hydroxymethyl)glutathione dehydrogenase 0.54 AZOBR_RS00620 NAD-dependent deacetylase low > 97
Pseudomonas fluorescens SBW25-INTG 0.68 PFLU_RS06395 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.13 PFLU_RS10600 NAD-dependent protein deacetylase low > 109
Pseudomonas fluorescens SBW25 0.68 PFLU_RS06395 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.13 PFLU_RS10600 NAD-dependent protein deacetylase low > 109
Pseudomonas putida KT2440 0.67 PP_1616 formaldehyde dehydrogenase, glutathione-dependent 0.29 PP_5402 deacetylase of acetyl-CoA synthetase, NAD-dependent low > 96
Pseudomonas stutzeri RCH2 0.67 Psest_2816 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.31 Psest_2405 NAD-dependent protein deacetylases, SIR2 family low > 67
Pseudomonas simiae WCS417 0.67 PS417_06330 S-(hydroxymethyl)glutathione dehydrogenase 0.14 PS417_10540 NAD-dependent deacetylase low > 88
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_3044 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) 0.17 Pf6N2E2_2109 NAD-dependent protein deacetylase of SIR2 family low > 103
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_05920 S-(hydroxymethyl)glutathione dehydrogenase 0.34 AO356_23430 NAD-dependent deacetylase low > 104
Pseudomonas sp. S08-1 0.67 OH686_18150 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.31 OH686_06015 NAD-dependent protein deacetylase of SIR2 family low > 80
Shewanella oneidensis MR-1 0.66 SO2054 adhC alcohol dehydrogenase class III (NCBI ptt file) 0.46 SO1938 cobB cobB protein (NCBI ptt file) low > 76
Dyella japonica UNC79MFTsu3.2 0.66 ABZR86_RS17285 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.16 ABZR86_RS05345 NAD-dependent protein deacetylase low > 74
Erwinia tracheiphila SCR3 0.66 LU632_RS17270 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.45 LU632_RS14640 cobB NAD-dependent protein deacylase low > 74
Pantoea sp. MT58 0.66 IAI47_06705 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.51 IAI47_11950 NAD-dependent protein deacylase 0.28 3
Rhodanobacter sp. FW510-T8 0.65 OKGIIK_16185 frmA S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.18 OKGIIK_08275 NAD-dependent protein deacetylase low > 52
Shewanella sp. ANA-3 0.65 Shewana3_1837 alcohol dehydrogenase (RefSeq) 0.48 Shewana3_1717 NAD-dependent deacetylase (RefSeq)
Rhodospirillum rubrum S1H 0.65 Rru_A3405 Formaldehyde dehydrogenase (glutathione) (NCBI) 0.53 Rru_A3645 Silent information regulator protein Sir2 (NCBI) low > 58
Dickeya dadantii 3937 0.65 DDA3937_RS09325 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.47 DDA3937_RS12975 NAD-dependent protein deacylase low > 74
Serratia liquefaciens MT49 0.65 IAI46_07885 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.49 IAI46_10355 NAD-dependent protein deacylase low > 86
Dickeya dianthicola ME23 0.65 DZA65_RS09655 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.48 DZA65_RS13510 NAD-dependent protein deacylase low > 75
Dickeya dianthicola 67-19 0.65 HGI48_RS09350 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.47 HGI48_RS13045 NAD-dependent protein deacylase low > 71
Rahnella sp. WP5 0.65 EX31_RS18715 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.49 EX31_RS24540 NAD-dependent protein deacylase low > 89
Enterobacter asburiae PDN3 0.65 EX28DRAFT_1257 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.49 EX28DRAFT_1810 NAD-dependent protein deacetylases, SIR2 family low > 76
Shewanella loihica PV-4 0.65 Shew_1540 alcohol dehydrogenase (RefSeq) 0.48 Shew_1662 NAD-dependent deacetylase (RefSeq) low > 60
Kangiella aquimarina DSM 16071 0.65 B158DRAFT_0940 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.31 B158DRAFT_0796 NAD-dependent protein deacetylases, SIR2 family low > 40
Klebsiella michiganensis M5al 0.65 BWI76_RS13260 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.50 BWI76_RS11230 NAD-dependent deacylase low > 92
Enterobacter sp. TBS_079 0.65 MPMX20_02209 S-(hydroxymethyl)glutathione dehydrogenase 0.48 MPMX20_01801 NAD-dependent protein deacylase 0.18 46
Azospirillum sp. SherDot2 0.64 MPMX19_05326 S-(hydroxymethyl)glutathione dehydrogenase 0.52 MPMX19_02648 NAD-dependent protein deacylase low > 112
Pectobacterium carotovorum WPP14 0.64 HER17_RS12790 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.51 HER17_RS08800 NAD-dependent protein deacylase low > 75
Rhodanobacter denitrificans MT42 0.64 LRK55_RS09575 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.20 LRK55_RS16230 NAD-dependent protein deacetylase low > 63
Alteromonas macleodii MIT1002 0.64 MIT1002_03089 S-(hydroxymethyl)glutathione dehydrogenase 0.51 MIT1002_02145 NAD-dependent protein deacylase low > 70
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS09935 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.20 LRK54_RS16480 NAD-dependent protein deacetylase low > 59
Shewanella amazonensis SB2B 0.63 Sama_0004 alcohol dehydrogenase, zinc-binding (RefSeq) 0.46 Sama_1435 NAD-dependent deacetylase (RefSeq) low > 62
Acidovorax sp. GW101-3H11 0.63 Ac3H11_3163 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) 0.28 Ac3H11_4140 NAD-dependent protein deacetylase of SIR2 family low > 79
Lysobacter sp. OAE881 0.63 ABIE51_RS18925 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.18 ABIE51_RS09130 NAD-dependent protein deacetylase low > 62
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF2617 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) 0.52 GFF3403 NAD-dependent protein deacetylase of SIR2 family low > 78
Escherichia coli Nissle 1917 0.60 ECOLIN_RS02210 S-(hydroxymethyl)glutathione dehydrogenase 0.51 ECOLIN_RS06455 Sir2 family NAD+-dependent deacetylase
Escherichia coli BL21 0.60 ECD_00310 alcohol dehydrogenase class III; glutathione-dependent formaldehyde dehydrogenase 0.51 ECD_01118 deacetylase of acs and cheY, chemotaxis regulator low > 61
Escherichia fergusonii Becca 0.60 EFB2_03694 S-(hydroxymethyl)glutathione dehydrogenase 0.51 EFB2_02855 NAD-dependent protein deacylase low > 86
Escherichia coli BW25113 0.60 b0356 frmA alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase (NCBI) 0.51 b1120 cobB deacetylase of acs and cheY, regulates chemotaxis (NCBI) low > 76
Escherichia coli ECRC98 0.60 JDDGAC_12395 frmA S-(hydroxymethyl)glutathione dehydrogenase 0.51 JDDGAC_07100 cobB NAD-dependent protein deacylase low > 86
Escherichia coli ECRC62 0.60 BNILDI_23065 frmA S-(hydroxymethyl)glutathione dehydrogenase 0.51 BNILDI_19130 cobB NAD-dependent protein deacylase low > 75
Escherichia coli ECRC100 0.60 OKFHMN_08740 frmA S-(hydroxymethyl)glutathione dehydrogenase 0.51 OKFHMN_03440 cobB NAD-dependent protein deacylase low > 80
Escherichia coli ECRC102 0.60 NIAGMN_06795 frmA S-(hydroxymethyl)glutathione dehydrogenase 0.51 NIAGMN_24390 cobB NAD-dependent protein deacylase
Escherichia coli ECRC101 0.60 MCAODC_27970 frmA S-(hydroxymethyl)glutathione dehydrogenase 0.51 MCAODC_22800 cobB NAD-dependent protein deacylase low > 87
Escherichia coli ECOR27 0.60 NOLOHH_01650 frmA S-(hydroxymethyl)glutathione dehydrogenase 0.51 NOLOHH_20965 cobB NAD-dependent protein deacylase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_03314 S-(hydroxymethyl)glutathione dehydrogenase 0.51 OHPLBJKB_02546 NAD-dependent protein deacylase low > 73
Escherichia coli ECOR38 0.60 HEPCGN_07365 frmA S-(hydroxymethyl)glutathione dehydrogenase 0.51 HEPCGN_24045 cobB NAD-dependent protein deacylase low > 87
Escherichia coli ECRC99 0.60 KEDOAH_19230 frmA S-(hydroxymethyl)glutathione dehydrogenase 0.51 KEDOAH_24315 cobB NAD-dependent protein deacylase

Not shown: 16 genomes with orthologs for CCNA_02601 only; 6 genomes with orthologs for CCNA_03594 only