Conservation of cofitness between CCNA_01915 and CCNA_03392 in Caulobacter crescentus NA1000

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Caulobacter crescentus NA1000 1.0 CCNA_01915 ribosomal small subunit pseudouridine synthase A 1.0 CCNA_03392 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit 0.55 11
Caulobacter crescentus NA1000 Δfur 1.00 CCNA_01915 ribosomal small subunit pseudouridine synthase A 1.00 CCNA_03392 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit 0.58 27
Brevundimonas sp. GW460-12-10-14-LB2 0.57 A4249_RS11350 pseudouridine synthase 0.61 A4249_RS08935 5-(carboxyamino)imidazole ribonucleotide synthase — —
Lysobacter sp. OAE881 0.50 ABIE51_RS18480 pseudouridine synthase 0.36 ABIE51_RS15390 5-(carboxyamino)imidazole ribonucleotide synthase low > 62
Magnetospirillum magneticum AMB-1 0.50 AMB_RS12445 rRNA pseudouridine synthase 0.38 AMB_RS11140 5-(carboxyamino)imidazole ribonucleotide synthase — —
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS00325 16S rRNA pseudouridine(516) synthase 0.32 ABZR86_RS09830 5-(carboxyamino)imidazole ribonucleotide synthase — —
Rhodanobacter sp. FW510-T8 0.48 OKGIIK_09050 Pseudouridine synthase 0.35 OKGIIK_03050 purK 5-(carboxyamino)imidazole ribonucleotide synthase — —
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS15935 rRNA pseudouridine synthase 0.33 LRK54_RS13815 5-(carboxyamino)imidazole ribonucleotide synthase — —
Rhodanobacter denitrificans MT42 0.47 LRK55_RS15690 pseudouridine synthase 0.33 LRK55_RS13530 5-(carboxyamino)imidazole ribonucleotide synthase low > 63
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.4611.1 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) 0.38 Xcc-8004.2012.1 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) low > 74
Variovorax sp. SCN45 0.35 GFF3076 SSU rRNA pseudouridine(516) synthase (EC 5.4.99.19) 0.35 GFF5513 N5-carboxyaminoimidazole ribonucleotide synthase (EC 6.3.4.18) low > 127
Escherichia fergusonii Becca 0.35 EFB2_01673 Ribosomal small subunit pseudouridine synthase A 0.24 EFB2_03540 N5-carboxyaminoimidazole ribonucleotide synthase low > 86
Escherichia coli BL21 0.35 ECD_02113 16S rRNA pseudouridine(516) synthase 0.24 ECD_00472 N5-carboxyaminoimidazole ribonucleotide synthase low > 61
Escherichia coli ECRC100 0.35 OKFHMN_23360 rsuA 16S rRNA pseudouridine(516) synthase RsuA 0.24 OKFHMN_07840 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 80
Escherichia coli ECRC98 0.35 JDDGAC_27320 rsuA 16S rRNA pseudouridine(516) synthase RsuA 0.24 JDDGAC_11490 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 86
Escherichia coli ECRC101 0.35 MCAODC_14410 rsuA 16S rRNA pseudouridine(516) synthase RsuA 0.24 MCAODC_27060 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 87
Escherichia coli ECRC99 0.35 KEDOAH_04825 rsuA 16S rRNA pseudouridine(516) synthase RsuA 0.24 KEDOAH_20130 purK 5-(carboxyamino)imidazole ribonucleotide synthase — —
Escherichia coli ECRC62 0.35 BNILDI_13855 rsuA 16S rRNA pseudouridine(516) synthase RsuA 0.24 BNILDI_22260 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 75
Shewanella loihica PV-4 0.35 Shew_2975 pseudouridine synthase (RefSeq) 0.30 Shew_1249 phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) low > 60
Escherichia coli Nissle 1917 0.35 ECOLIN_RS12760 16S rRNA pseudouridine(516) synthase RsuA 0.24 ECOLIN_RS03025 5-(carboxyamino)imidazole ribonucleotide synthase — —
Escherichia coli ECOR27 0.35 NOLOHH_14935 rsuA 16S rRNA pseudouridine(516) synthase RsuA 0.24 NOLOHH_00830 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 75
Escherichia coli ECRC102 0.35 NIAGMN_21125 rsuA 16S rRNA pseudouridine(516) synthase RsuA 0.24 NIAGMN_05895 purK 5-(carboxyamino)imidazole ribonucleotide synthase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_01526 Ribosomal small subunit pseudouridine synthase A 0.24 OHPLBJKB_03159 N5-carboxyaminoimidazole ribonucleotide synthase low > 73
Escherichia coli BW25113 0.35 b2183 rsuA 16S rRNA pseudouridylate 516 synthase (NCBI) 0.24 b0522 purK phosphoribosylaminoimidazole carboxylase (NCBI) low > 76
Escherichia coli ECOR38 0.34 HEPCGN_22625 rsuA 16S rRNA pseudouridine(516) synthase RsuA 0.24 HEPCGN_06480 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 87
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS03150 16S rRNA pseudouridine(516) synthase 0.40 QEN71_RS02450 5-(carboxyamino)imidazole ribonucleotide synthase low > 153
Variovorax sp. OAS795 0.34 ABID97_RS09900 16S rRNA pseudouridine(516) synthase 0.33 ABID97_RS01700 5-(carboxyamino)imidazole ribonucleotide synthase — —
Klebsiella michiganensis M5al 0.34 BWI76_RS19810 16S rRNA pseudouridine(516) synthase 0.26 BWI76_RS07065 5-(carboxyamino)imidazole ribonucleotide synthase — —
Vibrio cholerae E7946 ATCC 55056 0.34 CSW01_08220 16S rRNA pseudouridine(516) synthase 0.30 CSW01_00260 5-(carboxyamino)imidazole ribonucleotide synthase low > 62
Dickeya dadantii 3937 0.33 DDA3937_RS09160 16S rRNA pseudouridine(516) synthase RsuA 0.23 DDA3937_RS15110 5-(carboxyamino)imidazole ribonucleotide synthase low > 74
Dechlorosoma suillum PS 0.33 Dsui_0824 pseudouridine synthase family protein 0.36 Dsui_0091 phosphoribosylaminoimidazole carboxylase, PurK protein — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF3753 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) 0.25 GFF4438 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) low > 78
Serratia liquefaciens MT49 0.32 IAI46_17345 16S rRNA pseudouridine(516) synthase RsuA 0.26 IAI46_05370 5-(carboxyamino)imidazole ribonucleotide synthase low > 86
Enterobacter asburiae PDN3 0.32 EX28DRAFT_0378 pseudouridine synthase 0.26 EX28DRAFT_2460 phosphoribosylaminoimidazole carboxylase, PurK protein — —
Rahnella sp. WP5 0.32 EX31_RS19195 16S rRNA pseudouridine(516) synthase RsuA 0.26 EX31_RS22620 5-(carboxyamino)imidazole ribonucleotide synthase low > 89
Cupriavidus basilensis FW507-4G11 0.32 RR42_RS15880 pseudouridine synthase 0.36 RR42_RS03230 phosphoribosylaminoimidazole carboxylase — —
Pectobacterium carotovorum WPP14 0.32 HER17_RS12950 16S rRNA pseudouridine(516) synthase RsuA 0.23 HER17_RS06470 5-(carboxyamino)imidazole ribonucleotide synthase low > 75
Shewanella sp. ANA-3 0.32 Shewana3_0760 ribosomal small subunit pseudouridine synthase A (RefSeq) 0.26 Shewana3_3156 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) low > 73
Dickeya dianthicola 67-19 0.32 HGI48_RS09200 16S rRNA pseudouridine(516) synthase RsuA 0.23 HGI48_RS15190 5-(carboxyamino)imidazole ribonucleotide synthase low > 71
Enterobacter sp. TBS_079 0.32 MPMX20_03149 Ribosomal small subunit pseudouridine synthase A 0.25 MPMX20_01097 N5-carboxyaminoimidazole ribonucleotide synthase low > 85
Dickeya dianthicola ME23 0.32 DZA65_RS09500 16S rRNA pseudouridine(516) synthase RsuA 0.23 DZA65_RS15995 5-(carboxyamino)imidazole ribonucleotide synthase low > 75
Erwinia tracheiphila SCR3 0.32 LU632_RS17595 rsuA 16S rRNA pseudouridine(516) synthase RsuA 0.24 LU632_RS15250 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.47 50
Paraburkholderia graminis OAS925 0.32 ABIE53_003276 16S rRNA pseudouridine516 synthase 0.39 ABIE53_003423 5-(carboxyamino)imidazole ribonucleotide synthase — —
Pantoea sp. MT58 0.32 IAI47_06585 16S rRNA pseudouridine(516) synthase RsuA 0.25 IAI47_14355 5-(carboxyamino)imidazole ribonucleotide synthase low > 76
Paraburkholderia bryophila 376MFSha3.1 0.31 H281DRAFT_04053 ribosomal small subunit pseudouridine synthase A (EC 5.4.99.-) 0.39 H281DRAFT_04185 5-(carboxyamino)imidazole ribonucleotide synthase — —
Ralstonia sp. UNC404CL21Col 0.31 ABZR87_RS08605 pseudouridine synthase 0.33 ABZR87_RS08090 5-(carboxyamino)imidazole ribonucleotide synthase — —
Burkholderia phytofirmans PsJN 0.31 BPHYT_RS15560 pseudouridine synthase 0.38 BPHYT_RS16245 phosphoribosylaminoimidazole carboxylase low > 109
Ralstonia solanacearum GMI1000 0.30 RS_RS03390 16S rRNA pseudouridine(516) synthase 0.34 RS_RS02885 5-(carboxyamino)imidazole ribonucleotide synthase — —
Ralstonia solanacearum PSI07 0.30 RPSI07_RS20655 16S rRNA pseudouridine(516) synthase 0.33 RPSI07_RS21130 5-(carboxyamino)imidazole ribonucleotide synthase — —
Ralstonia solanacearum IBSBF1503 0.30 RALBFv3_RS12605 16S rRNA pseudouridine(516) synthase 0.33 RALBFv3_RS12200 5-(carboxyamino)imidazole ribonucleotide synthase — —
Ralstonia solanacearum UW163 0.30 UW163_RS00960 16S rRNA pseudouridine(516) synthase 0.33 UW163_RS01410 5-(carboxyamino)imidazole ribonucleotide synthase — —
Marinobacter adhaerens HP15 0.29 HP15_3359 pseudouridine synthase, Rsu 0.38 HP15_2350 phosphoribosylaminoimidazole carboxylase ATPase subunit — —
Shewanella amazonensis SB2B 0.29 Sama_2614 pseudouridine synthase, Rsu (RefSeq) 0.25 Sama_1063 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) low > 62
Hydrogenophaga sp. GW460-11-11-14-LB1 0.28 GFF5277 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) 0.35 GFF2770 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) — —
Herbaspirillum seropedicae SmR1 0.28 HSERO_RS08590 pseudouridine synthase 0.37 HSERO_RS03370 phosphoribosylaminoimidazole carboxylase — —
Pseudomonas putida KT2440 0.27 PP_1409 ribosomal small subunit pseudouridine synthase A 0.38 PP_5335 N5-carboxyaminoimidazole ribonucleotide synthase — —
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_17535 16S rRNA pseudouridine(516) synthase 0.36 AO353_09935 phosphoribosylaminoimidazole carboxylase — —
Pseudomonas sp. S08-1 0.27 OH686_05950 SSU rRNA pseudouridine(516) synthase 0.38 OH686_13380 N5-carboxyaminoimidazole ribonucleotide synthase — —
Acinetobacter radioresistens SK82 0.26 MPMX26_01203 Ribosomal small subunit pseudouridine synthase A 0.34 MPMX26_03050 N5-carboxyaminoimidazole ribonucleotide synthase low > 36
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_3981 ribosomal small subunit pseudouridine synthase A 0.36 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_3981 ribosomal small subunit pseudouridine synthase A 0.36 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase — —
Pseudomonas fluorescens SBW25 0.26 PFLU_RS07085 pseudouridine synthase 0.35 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase — —
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS07085 pseudouridine synthase 0.35 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase — —
Pseudomonas simiae WCS417 0.26 PS417_07010 pseudouridine synthase 0.36 PS417_28115 phosphoribosylaminoimidazole carboxylase — —
Pseudomonas stutzeri RCH2 0.25 Psest_3049 pseudouridine synthase 0.39 Psest_4068 phosphoribosylaminoimidazole carboxylase, PurK protein — —
Pseudomonas sp. RS175 0.25 PFR28_00665 Ribosomal small subunit pseudouridine synthase A 0.37 PFR28_04495 N5-carboxyaminoimidazole ribonucleotide synthase — —
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_3297 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) 0.35 Pf1N1B4_2028 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) — —
Pseudomonas fluorescens GW456-L13 0.25 PfGW456L13_4535 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) 0.35 PfGW456L13_747 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) — —
Pseudomonas fluorescens FW300-N2C3 0.25 AO356_04690 16S rRNA pseudouridine(516) synthase 0.36 AO356_11075 phosphoribosylaminoimidazole carboxylase — —
Pseudomonas fluorescens FW300-N2E2 0.25 Pf6N2E2_2785 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) 0.37 Pf6N2E2_4081 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) — —

Not shown: 1 genomes with orthologs for CCNA_01915 only; 33 genomes with orthologs for CCNA_03392 only