Conservation of cofitness between BPHYT_RS15595 and BPHYT_RS17380 in Burkholderia phytofirmans PsJN

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS15595 ABC transporter 1.0 BPHYT_RS17380 ribulose-phosphate 3-epimerase 0.24 20
Paraburkholderia sabiae LMG 24235 0.93 QEN71_RS03115 ABC transporter ATP-binding protein 0.91 QEN71_RS27540 ribulose-phosphate 3-epimerase — —
Paraburkholderia bryophila 376MFSha3.1 0.93 H281DRAFT_04060 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family 0.97 H281DRAFT_05717 ribulose-5-phosphate 3-epimerase low > 103
Paraburkholderia graminis OAS925 0.91 ABIE53_003283 branched-chain amino acid transport system ATP-binding protein 0.96 ABIE53_003638 ribulose-phosphate 3-epimerase low > 113
Castellaniella sp019104865 MT123 0.89 ABCV34_RS10515 ABC transporter ATP-binding protein 0.68 ABCV34_RS10270 ribulose-phosphate 3-epimerase — —
Ralstonia solanacearum PSI07 0.81 RPSI07_RS12705 ABC transporter ATP-binding protein 0.77 RPSI07_RS10765 ribulose-phosphate 3-epimerase — —
Ralstonia solanacearum UW163 0.81 UW163_RS08990 ABC transporter ATP-binding protein 0.77 UW163_RS07150 ribulose-phosphate 3-epimerase — —
Ralstonia solanacearum IBSBF1503 0.81 RALBFv3_RS04680 ABC transporter ATP-binding protein 0.77 RALBFv3_RS06475 ribulose-phosphate 3-epimerase — —
Cupriavidus basilensis FW507-4G11 0.81 RR42_RS16965 ABC transporter 0.80 RR42_RS18285 ribulose-phosphate 3-epimerase — —
Ralstonia sp. UNC404CL21Col 0.81 ABZR87_RS00300 ABC transporter ATP-binding protein 0.77 ABZR87_RS02130 ribulose-phosphate 3-epimerase — —
Ralstonia solanacearum GMI1000 0.80 RS_RS12240 ABC transporter ATP-binding protein 0.77 RS_RS14420 ribulose-phosphate 3-epimerase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.76 GFF780 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) 0.69 GFF2197 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) low > 90
Acidovorax sp. GW101-3H11 0.73 Ac3H11_1693 ABC transporter for glutamine/isoleucine/leucine/phenylalanine/proline/serine/tyrosine, ATPase component 1 (from data) 0.62 Ac3H11_757 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) — —
Variovorax sp. OAS795 0.72 ABID97_RS07850 ABC transporter ATP-binding protein 0.65 ABID97_RS04905 ribulose-phosphate 3-epimerase — —
Variovorax sp. SCN45 0.72 GFF6031 Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1) 0.65 GFF6246 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) 0.75 80
Serratia liquefaciens MT49 0.64 IAI46_13095 ABC transporter ATP-binding protein 0.74 IAI46_23685 ribulose-phosphate 3-epimerase low > 86
Klebsiella michiganensis M5al 0.63 BWI76_RS07270 ABC transporter ATP-binding protein 0.74 BWI76_RS26070 ribulose-phosphate 3-epimerase — —
Enterobacter asburiae PDN3 0.63 EX28DRAFT_1076 ABC-type branched-chain amino acid transport systems, ATPase component 0.73 EX28DRAFT_4156 ribulose-phosphate 3-epimerase low > 76
Dechlorosoma suillum PS 0.61 Dsui_0627 ABC-type branched-chain amino acid transport systems, ATPase component 0.75 Dsui_0221 ribulose-phosphate 3-epimerase — —
Desulfovibrio vulgaris Miyazaki F 0.50 DvMF_2753 ABC transporter related (RefSeq) 0.39 DvMF_0977 Ribulose-phosphate 3-epimerase (RefSeq) — —
Azospirillum sp. SherDot2 0.49 MPMX19_02064 Lipopolysaccharide export system ATP-binding protein LptB 0.65 MPMX19_02946 Ribulose-phosphate 3-epimerase low > 112
Fusobacterium nucleatum SB010 0.49 HUW76_08100 ABC transporter ATP-binding protein 0.42 HUW76_06410 ribulose-phosphate 3-epimerase — —
Dickeya dadantii 3937 0.48 DDA3937_RS18210 ABC transporter ATP-binding protein 0.73 DDA3937_RS19530 ribulose-phosphate 3-epimerase — —
Bifidobacterium breve UCC2003 0.48 BBR_RS18060 ABC transporter ATP-binding protein 0.36 BBR_RS15800 ribulose-phosphate 3-epimerase — —
Marinobacter adhaerens HP15 0.48 HP15_2704 branched-chain amino acid ABC transporter, ATP-binding protein 0.66 HP15_3286 ribulose-phosphate 3-epimerase-like protein — —
Magnetospirillum magneticum AMB-1 0.47 AMB_RS08465 ABC transporter ATP-binding protein 0.50 AMB_RS06980 ribulose-phosphate 3-epimerase — —
Azospirillum brasilense Sp245 0.46 AZOBR_RS32405 ABC transporter 0.45 AZOBR_RS06755 ribulose-phosphate 3-epimerase — —
Rhodopseudomonas palustris CGA009 0.46 TX73_019720 ABC transporter ATP-binding protein 0.44 TX73_019755 ribulose-phosphate 3-epimerase — —
Pseudomonas putida KT2440 0.46 PP_1138 branched chain amino acid transporter - ATP binding subunit 0.69 PP_0415 ribulose-5-phosphate 3-epimerase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_3848 L-valine ABC transporter ATP-binding protein / L-isoleucine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein 0.70 Psyr_4611 ribulose-5-phosphate 3-epimerase — —
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_3848 L-valine ABC transporter ATP-binding protein / L-isoleucine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein 0.70 Psyr_4611 ribulose-5-phosphate 3-epimerase — —
Rahnella sp. WP5 0.45 EX31_RS14790 ABC transporter ATP-binding protein 0.70 EX31_RS04705 ribulose-phosphate 3-epimerase — —
Pantoea sp. MT58 0.45 IAI47_01580 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.70 IAI47_01910 ribulose-phosphate 3-epimerase — —
Pectobacterium carotovorum WPP14 0.45 HER17_RS00510 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.71 HER17_RS01795 ribulose-phosphate 3-epimerase low > 75
Enterobacter sp. TBS_079 0.45 MPMX20_04331 Lipopolysaccharide export system ATP-binding protein LptB 0.72 MPMX20_04275 Ribulose-phosphate 3-epimerase low > 85
Pseudomonas simiae WCS417 0.45 PS417_06600 leucine/isoleucine/valine transporter ATP-binding subunit 0.69 PS417_25735 ribulose-phosphate 3-epimerase — —
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS06630 ABC transporter ATP-binding protein 0.69 PFLU_RS27390 ribulose-phosphate 3-epimerase — —
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_05335 ABC transporter ATP-binding protein 0.68 AO356_14410 ribulose phosphate epimerase — —
Dickeya dianthicola 67-19 0.45 HGI48_RS20715 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.73 HGI48_RS19660 ribulose-phosphate 3-epimerase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF551 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) 0.72 GFF633 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) low > 78
Pseudomonas fluorescens SBW25 0.45 PFLU_RS06630 ABC transporter ATP-binding protein 0.69 PFLU_RS27390 ribulose-phosphate 3-epimerase — —
Escherichia coli Nissle 1917 0.44 ECOLIN_RS19760 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.73 ECOLIN_RS19345 ribulose-phosphate 3-epimerase low > 55
Escherichia fergusonii Becca 0.44 EFB2_00367 Lipopolysaccharide export system ATP-binding protein LptB 0.73 EFB2_00442 Ribulose-phosphate 3-epimerase — —
Escherichia coli ECRC98 0.44 JDDGAC_20385 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.73 JDDGAC_20760 dam adenine-specific DNA-methyltransferase — —
Escherichia coli ECRC102 0.44 NIAGMN_14525 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.73 NIAGMN_14900 dam adenine-specific DNA-methyltransferase — —
Escherichia coli ECRC99 0.44 KEDOAH_11385 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.73 KEDOAH_11010 dam adenine-specific DNA-methyltransferase — —
Escherichia coli BL21 0.44 ECD_03304 branched-chain amino acid ABC transporter ATPase 0.73 ECD_03238 D-ribulose-5-phosphate 3-epimerase low > 61
Escherichia coli BW25113 0.44 b3455 livG leucine/isoleucine/valine transporter subunit (NCBI) 0.73 b3386 rpe ribulose-phosphate 3-epimerase (NCBI) low > 76
Escherichia coli ECRC101 0.44 MCAODC_07285 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.73 MCAODC_07660 dam adenine-specific DNA-methyltransferase — —
Escherichia coli ECRC62 0.44 BNILDI_02955 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.73 BNILDI_02600 dam adenine-specific DNA-methyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_00248 Lipopolysaccharide export system ATP-binding protein LptB 0.73 OHPLBJKB_00317 Ribulose-phosphate 3-epimerase — —
Escherichia coli ECOR38 0.44 HEPCGN_15575 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.73 HEPCGN_15950 rpe ribulose-phosphate 3-epimerase low > 87
Escherichia coli ECOR27 0.44 NOLOHH_08550 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.73 NOLOHH_08920 dam adenine-specific DNA-methyltransferase — —
Pseudomonas fluorescens GW456-L13 0.44 PfGW456L13_4610 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) 0.68 PfGW456L13_1215 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) — —
Escherichia coli ECRC100 0.44 OKFHMN_16755 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.73 OKFHMN_17130 dam adenine-specific DNA-methyltransferase — —
Agrobacterium fabrum C58 0.44 Atu5525 ABC transporter nucleotide binding/ATPase (branched chain amino acid) 0.46 Atu1839 ribulose-phosphate 3-epimerase — —
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_17110 ABC transporter ATP-binding protein 0.68 AO353_07240 ribulose phosphate epimerase — —
Pseudomonas stutzeri RCH2 0.44 Psest_1309 ABC-type branched-chain amino acid transport systems, ATPase component 0.69 Psest_3652 ribulose-phosphate 3-epimerase — —
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_3215 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) 0.69 Pf1N1B4_2543 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) — —
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_2925 ABC transporter for L-leucine/L-isoleucine/L-phenylalanine/D-alanine, ATPase component 1 LivG (from data) 0.68 Pf6N2E2_4820 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) — —
Pseudomonas sp. RS175 0.44 PFR28_00537 Lipopolysaccharide export system ATP-binding protein LptB 0.69 PFR28_04049 Ribulose-phosphate 3-epimerase — —
Erwinia tracheiphila SCR3 0.44 LU632_RS19240 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.71 LU632_RS22850 rpe ribulose-phosphate 3-epimerase — —
Pseudomonas sp. S08-1 0.42 OH686_04620 Branched-chain amino acid ABC transporter, ATP-binding protein LivG 0.68 OH686_15115 ribulose-phosphate 3-epimerase — —
Sinorhizobium meliloti 1021 0.41 SMc01949 high-affinity branched-chain amino acid ABC transporter ATP-binding protein 0.46 SMc00511 D-ribulose-5-phosphate 3-epimerase low > 103
Rhizobium sp. OAE497 0.41 ABIE40_RS14705 ABC transporter ATP-binding protein 0.46 ABIE40_RS10105 ribulose-phosphate 3-epimerase — —
Dinoroseobacter shibae DFL-12 0.40 Dshi_0375 ABC transporter related (RefSeq) 0.45 Dshi_3006 Ribulose-phosphate 3-epimerase (RefSeq) — —
Synechococcus elongatus PCC 7942 0.40 Synpcc7942_2493 natA ATPase 0.51 Synpcc7942_0604 rpe ribulose-phosphate 3-epimerase — —
Phaeobacter inhibens DSM 17395 0.39 PGA1_c32620 high-affinity branched-chain amino acid transport ATP-binding protein 0.44 PGA1_c04170 ribulose-phosphate 3-epimerase Rpe — —
Shewanella loihica PV-4 0.39 Shew_2611 ABC transporter-related protein (RefSeq) 0.70 Shew_0219 ribulose-phosphate 3-epimerase (RefSeq) — —

Not shown: 1 genomes with orthologs for BPHYT_RS15595 only; 34 genomes with orthologs for BPHYT_RS17380 only