Conservation of cofitness between BPHYT_RS33900 and BPHYT_RS14910 in Burkholderia phytofirmans PsJN

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS33900 3-isopropylmalate dehydrogenase 1.0 BPHYT_RS14910 chorismate mutase 0.94 6
Paraburkholderia graminis OAS925 0.98 ABIE53_004804 3-isopropylmalate dehydrogenase 0.93 ABIE53_003157 chorismate mutase/prephenate dehydratase 0.95 5
Paraburkholderia bryophila 376MFSha3.1 0.98 H281DRAFT_06072 3-isopropylmalate dehydrogenase 0.93 H281DRAFT_03925 chorismate mutase 0.72 7
Paraburkholderia sabiae LMG 24235 0.96 QEN71_RS17620 3-isopropylmalate dehydrogenase 0.89 QEN71_RS04070 prephenate dehydratase 0.78 22
Ralstonia sp. UNC404CL21Col 0.89 ABZR87_RS14530 3-isopropylmalate dehydrogenase 0.62 ABZR87_RS09450 prephenate dehydratase 0.88 15
Cupriavidus basilensis FW507-4G11 0.89 RR42_RS14385 3-isopropylmalate dehydrogenase 0.65 RR42_RS04460 chorismate mutase 0.75 24
Ralstonia solanacearum PSI07 0.89 RPSI07_RS14705 3-isopropylmalate dehydrogenase 0.61 RPSI07_RS19710 prephenate dehydratase 0.70 10
Ralstonia solanacearum UW163 0.89 UW163_RS11115 3-isopropylmalate dehydrogenase 0.60 UW163_RS16050 chorismate mutase — —
Ralstonia solanacearum IBSBF1503 0.89 RALBFv3_RS02610 3-isopropylmalate dehydrogenase 0.60 RALBFv3_RS13760 chorismate mutase 0.60 10
Ralstonia solanacearum GMI1000 0.89 RS_RS09990 3-isopropylmalate dehydrogenase 0.62 RS_RS04495 prephenate dehydratase low > 80
Herbaspirillum seropedicae SmR1 0.86 HSERO_RS16500 3-isopropylmalate dehydrogenase 0.61 HSERO_RS18430 chorismate mutase 0.93 7
Variovorax sp. SCN45 0.79 GFF3888 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.50 GFF6182 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 127
Acidovorax sp. GW101-3H11 0.79 Ac3H11_1528 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.51 Ac3H11_2574 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.94 6
Variovorax sp. OAS795 0.79 ABID97_RS08455 3-isopropylmalate dehydrogenase 0.50 ABID97_RS09515 prephenate dehydratase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.77 GFF3360 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.50 GFF5343 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.91 4
Castellaniella sp019104865 MT123 0.75 ABCV34_RS04280 3-isopropylmalate dehydrogenase 0.55 ABCV34_RS07110 prephenate dehydratase low > 48
Dechlorosoma suillum PS 0.68 Dsui_3198 3-isopropylmalate dehydrogenase 0.47 Dsui_1940 chorismate mutase, clade 2 — —
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_20635 3-isopropylmalate dehydrogenase 0.46 AO353_02070 prephenate dehydratase 0.80 36
Pseudomonas fluorescens FW300-N1B4 0.65 Pf1N1B4_12 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.46 Pf1N1B4_350 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.81 32
Pseudomonas putida KT2440 0.64 PP_1988 3-isopropylmalate dehydrogenase 0.47 PP_1769 chorismate mutase/Prephenate dehydratase — —
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_66 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.46 Pf6N2E2_2520 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_21415 3-isopropylmalate dehydrogenase 0.46 AO356_03465 prephenate dehydratase — —
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_3945 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.46 PfGW456L13_2176 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.79 50
Pseudomonas sp. RS175 0.64 PFR28_02821 3-isopropylmalate dehydrogenase 0.46 PFR28_00907 Bifunctional chorismate mutase/prephenate dehydratase — —
Marinobacter adhaerens HP15 0.64 HP15_1832 3-isopropylmalate dehydrogenase 0.46 HP15_1362 chorismate mutase / prephenate dehydratase — —
Pseudomonas simiae WCS417 0.64 PS417_18585 3-isopropylmalate dehydrogenase 0.46 PS417_08125 prephenate dehydratase low > 88
Pseudomonas fluorescens SBW25 0.63 PFLU_RS20565 3-isopropylmalate dehydrogenase 0.46 PFLU_RS08095 prephenate dehydratase — —
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS20565 3-isopropylmalate dehydrogenase 0.46 PFLU_RS08095 prephenate dehydratase — —
Kangiella aquimarina DSM 16071 0.63 B158DRAFT_1322 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.23 B158DRAFT_1385 Prephenate dehydratase low > 40
Pseudomonas syringae pv. syringae B728a ΔmexB 0.63 Psyr_1985 3-isopropylmalate dehydrogenase 0.46 Psyr_3645 prephenate dehydratase — —
Pseudomonas syringae pv. syringae B728a 0.63 Psyr_1985 3-isopropylmalate dehydrogenase 0.46 Psyr_3645 prephenate dehydratase — —
Pseudomonas stutzeri RCH2 0.63 Psest_2589 3-isopropylmalate dehydrogenase 0.45 Psest_1984 chorismate mutase domain of proteobacterial P-protein, clade 2 — —
Pseudomonas sp. S08-1 0.62 OH686_04470 3-isopropylmalate dehydrogenase 0.45 OH686_20870 Chorismate mutase I / Prephenate dehydratase 0.71 32
Xanthomonas campestris pv. campestris strain 8004 0.60 Xcc-8004.1053.1 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.43 Xcc-8004.3282.1 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.84 23
Acinetobacter radioresistens SK82 0.59 MPMX26_00348 3-isopropylmalate dehydrogenase 0.39 MPMX26_02021 Bifunctional chorismate mutase/prephenate dehydratase low > 36
Desulfovibrio vulgaris Miyazaki F 0.57 DvMF_1794 3-isopropylmalate dehydrogenase (RefSeq) 0.35 DvMF_1749 prephenate dehydratase (RefSeq) 0.92 21
Desulfovibrio vulgaris Hildenborough JW710 0.54 DVU2985 leuB 3-isopropylmalate dehydrogenase (TIGR) 0.35 DVU0462 chorismate mutase/prephenate dehydratase (TIGR) 0.92 8
Serratia liquefaciens MT49 0.51 IAI46_03350 3-isopropylmalate dehydrogenase 0.22 IAI46_03965 bifunctional chorismate mutase/prephenate dehydratase 0.75 6
Alteromonas macleodii MIT1002 0.51 MIT1002_00948 3-isopropylmalate dehydrogenase 0.26 MIT1002_01316 P-protein 0.96 31
Klebsiella michiganensis M5al 0.50 BWI76_RS04675 3-isopropylmalate dehydrogenase 0.25 BWI76_RS21465 bifunctional chorismate mutase/prephenate dehydratase 0.86 34
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.50 GFF165 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.23 GFF4179 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 78
Rahnella sp. WP5 0.50 EX31_RS03685 3-isopropylmalate dehydrogenase 0.22 EX31_RS07585 bifunctional chorismate mutase/prephenate dehydratase 0.98 13
Dickeya dianthicola ME23 0.50 DZA65_RS19205 3-isopropylmalate dehydrogenase 0.25 DZA65_RS17345 bifunctional chorismate mutase/prephenate dehydratase low > 75
Enterobacter sp. TBS_079 0.49 MPMX20_00768 3-isopropylmalate dehydrogenase 0.25 MPMX20_03466 Bifunctional chorismate mutase/prephenate dehydratase 0.93 17
Pectobacterium carotovorum WPP14 0.49 HER17_RS03080 3-isopropylmalate dehydrogenase 0.24 HER17_RS05385 bifunctional chorismate mutase/prephenate dehydratase 0.97 7
Dickeya dianthicola 67-19 0.49 HGI48_RS18060 3-isopropylmalate dehydrogenase 0.25 HGI48_RS16250 bifunctional chorismate mutase/prephenate dehydratase 0.86 10
Dickeya dadantii 3937 0.49 DDA3937_RS18120 3-isopropylmalate dehydrogenase 0.25 DDA3937_RS16130 bifunctional chorismate mutase/prephenate dehydratase 0.72 29
Enterobacter asburiae PDN3 0.49 EX28DRAFT_3669 3-isopropylmalate dehydrogenase 0.26 EX28DRAFT_2699 chorismate mutase (EC 5.4.99.5) 0.89 14
Escherichia fergusonii Becca 0.49 EFB2_03972 3-isopropylmalate dehydrogenase 0.27 EFB2_01293 Bifunctional chorismate mutase/prephenate dehydratase low > 86
Escherichia coli Nissle 1917 0.49 ECOLIN_RS00395 3-isopropylmalate dehydrogenase 0.27 ECOLIN_RS14695 bifunctional chorismate mutase/prephenate dehydratase 0.84 25
Escherichia coli ECOR38 0.49 HEPCGN_08700 leuB 3-isopropylmalate dehydrogenase 0.27 HEPCGN_20345 pheA bifunctional chorismate mutase/prephenate dehydratase 0.97 9
Escherichia coli ECRC100 0.49 OKFHMN_10720 leuB 3-isopropylmalate dehydrogenase 0.26 OKFHMN_21225 pheA bifunctional chorismate mutase/prephenate dehydratase 0.97 31
Escherichia coli ECRC101 0.49 MCAODC_01235 leuB 3-isopropylmalate dehydrogenase 0.26 MCAODC_11755 pheA bifunctional chorismate mutase/prephenate dehydratase 0.97 3
Escherichia coli ECRC98 0.49 JDDGAC_14315 leuB 3-isopropylmalate dehydrogenase 0.26 JDDGAC_24890 pheA bifunctional chorismate mutase/prephenate dehydratase 0.99 7
Escherichia coli ECRC102 0.49 NIAGMN_08570 leuB 3-isopropylmalate dehydrogenase 0.26 NIAGMN_18995 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli ECRC99 0.49 KEDOAH_17435 leuB 3-isopropylmalate dehydrogenase 0.26 KEDOAH_06995 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli ECRC62 0.49 BNILDI_08545 leuA 2-isopropylmalate synthase 0.27 BNILDI_11705 pheA bifunctional chorismate mutase/prephenate dehydratase 0.98 13
Escherichia coli ECOR27 0.49 NOLOHH_03065 leuA 2-isopropylmalate synthase 0.27 NOLOHH_12900 pheA bifunctional chorismate mutase/prephenate dehydratase 0.99 1
Escherichia coli BL21 0.49 ECD_00075 3-isopropylmalate dehydrogenase, NAD(+)-dependent 0.26 ECD_02488 chorismate mutase and prephenate dehydratase, P-protein 0.89 27
Escherichia coli HS(pFamp)R (ATCC 700891) 0.49 OHPLBJKB_03584 3-isopropylmalate dehydrogenase 0.26 OHPLBJKB_01109 P-protein low > 73
Escherichia coli BW25113 0.49 b0073 leuB 3-isopropylmalate dehydrogenase (VIMSS) 0.26 b2599 pheA fused chorismate mutase P/prephenate dehydratase (NCBI) 0.94 17
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_12600 3-isopropylmalate dehydrogenase 0.27 CSW01_03680 bifunctional chorismate mutase/prephenate dehydratase low > 62
Pantoea sp. MT58 0.47 IAI47_16005 3-isopropylmalate dehydrogenase 0.24 IAI47_04410 bifunctional chorismate mutase/prephenate dehydratase 0.97 13
Erwinia tracheiphila SCR3 0.47 LU632_RS02875 leuB 3-isopropylmalate dehydrogenase 0.25 LU632_RS16960 pheA bifunctional chorismate mutase/prephenate dehydratase 0.65 50
Lysobacter sp. OAE881 0.44 ABIE51_RS17585 3-isopropylmalate dehydrogenase 0.42 ABIE51_RS12145 prephenate dehydratase 0.97 17
Rhodanobacter sp. FW510-T8 0.42 OKGIIK_13595 leuB 3-isopropylmalate dehydrogenase 0.43 OKGIIK_06915 pheA prephenate dehydratase low > 52
Rhodanobacter denitrificans MT42 0.41 LRK55_RS09965 3-isopropylmalate dehydrogenase 0.44 LRK55_RS00135 prephenate dehydratase low > 63
Rhodanobacter denitrificans FW104-10B01 0.41 LRK54_RS10325 3-isopropylmalate dehydrogenase 0.44 LRK54_RS00395 prephenate dehydratase low > 59
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS15950 3-isopropylmalate dehydrogenase 0.44 ABZR86_RS02225 prephenate dehydratase 0.96 9

Not shown: 31 genomes with orthologs for BPHYT_RS33900 only; 0 genomes with orthologs for BPHYT_RS14910 only