Conservation of cofitness between BPHYT_RS02805 and BPHYT_RS12475 in Burkholderia phytofirmans PsJN

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS02805 maleylacetoacetate isomerase 1.0 BPHYT_RS12475 DNA mismatch repair protein MutS 0.22 12
Paraburkholderia graminis OAS925 0.91 ABIE53_000699 maleylpyruvate isomerase 0.91 ABIE53_002719 DNA mismatch repair protein MutS 0.16 50
Paraburkholderia bryophila 376MFSha3.1 0.89 H281DRAFT_01970 maleylacetoacetate isomerase (EC 5.2.1.2) 0.93 H281DRAFT_00537 DNA mismatch repair protein MutS low > 103
Paraburkholderia sabiae LMG 24235 0.78 QEN71_RS01655 maleylacetoacetate isomerase 0.86 QEN71_RS06085 DNA mismatch repair protein MutS low > 153
Cupriavidus basilensis FW507-4G11 0.70 RR42_RS01970 maleylacetoacetate isomerase 0.64 RR42_RS06285 DNA mismatch repair protein MutS low > 128
Ralstonia sp. UNC404CL21Col 0.67 ABZR87_RS06920 maleylacetoacetate isomerase 0.65 ABZR87_RS10580 DNA mismatch repair protein MutS low > 80
Ralstonia solanacearum UW163 0.62 UW163_RS02530 maleylacetoacetate isomerase 0.64 UW163_RS12390 DNA mismatch repair protein MutS — —
Ralstonia solanacearum IBSBF1503 0.62 RALBFv3_RS11050 maleylacetoacetate isomerase 0.64 RALBFv3_RS14920 DNA mismatch repair protein MutS low > 76
Ralstonia solanacearum PSI07 0.62 RPSI07_RS22255 maleylacetoacetate isomerase 0.65 RPSI07_RS18440 DNA mismatch repair protein MutS low > 81
Ralstonia solanacearum GMI1000 0.61 RS_RS01895 maleylacetoacetate isomerase 0.64 RS_RS05735 DNA mismatch repair protein MutS low > 80
Acinetobacter radioresistens SK82 0.57 MPMX26_02378 Maleylpyruvate isomerase 0.43 MPMX26_01954 DNA mismatch repair protein MutS low > 36
Shewanella sp. ANA-3 0.57 Shewana3_2777 maleylacetoacetate isomerase (RefSeq) 0.46 Shewana3_1125 DNA mismatch repair protein MutS (RefSeq) low > 73
Dyella japonica UNC79MFTsu3.2 0.57 ABZR86_RS18680 maleylacetoacetate isomerase 0.46 ABZR86_RS00630 DNA mismatch repair protein MutS low > 74
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS05615 maleylacetoacetate isomerase 0.60 HSERO_RS16360 DNA mismatch repair protein MutS — —
Shewanella loihica PV-4 0.56 Shew_1439 maleylacetoacetate isomerase (RefSeq) 0.46 Shew_1214 DNA mismatch repair protein (RefSeq) 0.45 29
Lysobacter sp. OAE881 0.56 ABIE51_RS04250 maleylacetoacetate isomerase 0.48 ABIE51_RS07785 DNA mismatch repair protein MutS low > 62
Variovorax sp. OAS795 0.56 ABID97_RS12400 maleylacetoacetate isomerase 0.47 ABID97_RS20815 DNA mismatch repair protein MutS low > 91
Acidovorax sp. GW101-3H11 0.55 Ac3H11_2306 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) 0.49 Ac3H11_3641 DNA mismatch repair protein MutS low > 79
Shewanella oneidensis MR-1 0.55 SO1671 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) 0.46 SO3431 mutS DNA mismatch repair protein MutS (NCBI ptt file) low > 76
Castellaniella sp019104865 MT123 0.55 ABCV34_RS13685 maleylacetoacetate isomerase 0.49 ABCV34_RS00270 DNA mismatch repair protein MutS low > 48
Variovorax sp. SCN45 0.55 GFF806 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) 0.47 GFF6634 DNA mismatch repair protein MutS low > 127
Rhodanobacter denitrificans MT42 0.54 LRK55_RS05490 maleylacetoacetate isomerase 0.47 LRK55_RS14650 DNA mismatch repair protein MutS low > 63
Rhodanobacter denitrificans FW104-10B01 0.54 LRK54_RS05735 maleylacetoacetate isomerase 0.46 LRK54_RS14935 DNA mismatch repair protein MutS low > 59
Rhodanobacter sp. FW510-T8 0.53 OKGIIK_01115 maiA maleylacetoacetate isomerase 0.47 OKGIIK_03705 mutS DNA mismatch repair protein MutS low > 52
Pseudomonas stutzeri RCH2 0.53 Psest_3511 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) 0.47 Psest_2875 DNA mismatch repair protein MutS low > 67
Kangiella aquimarina DSM 16071 0.52 B158DRAFT_1449 maleylacetoacetate isomerase 0.45 B158DRAFT_1529 DNA mismatch repair protein MutS — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.51 GFF4799 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) 0.49 GFF3599 DNA mismatch repair protein MutS — —
Shewanella amazonensis SB2B 0.51 Sama_2218 maleylacetoacetate isomerase (RefSeq) 0.45 Sama_1045 DNA mismatch repair protein MutS (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_06790 maleylacetoacetate isomerase 0.47 CSW01_02840 DNA mismatch repair protein MutS low > 62
Pseudomonas sp. S08-1 0.50 OH686_21095 maleylacetoacetate isomerase 0.46 OH686_18195 DNA mismatch repair protein MutS low > 80
Rhodopseudomonas palustris CGA009 0.49 TX73_024280 maleylacetoacetate isomerase 0.32 TX73_002655 DNA mismatch repair protein MutS low > 86
Azospirillum sp. SherDot2 0.48 MPMX19_02062 Maleylpyruvate isomerase 0.31 MPMX19_00908 DNA mismatch repair protein MutS low > 112
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.4525.1 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) 0.46 Xcc-8004.3760.1 DNA mismatch repair protein MutS low > 74
Alteromonas macleodii MIT1002 0.47 MIT1002_01149 Maleylpyruvate isomerase 0.46 MIT1002_00953 DNA mismatch repair protein MutS low > 70
Brevundimonas sp. GW460-12-10-14-LB2 0.43 A4249_RS12095 maleylacetoacetate isomerase 0.28 A4249_RS12110 DNA mismatch repair protein MutS — —
Klebsiella michiganensis M5al 0.43 BWI76_RS19575 maleylacetoacetate isomerase 0.47 BWI76_RS22600 DNA mismatch repair protein MutS low > 92
Sphingomonas koreensis DSMZ 15582 0.42 Ga0059261_0507 maleylacetoacetate isomerase 0.30 Ga0059261_3784 DNA mismatch repair protein MutS low > 68
Escherichia coli ECRC98 0.41 JDDGAC_27560 maiA maleylacetoacetate isomerase 0.47 JDDGAC_24190 mutS DNA mismatch repair protein MutS low > 86
Escherichia coli ECRC102 0.41 NIAGMN_21370 maiA maleylacetoacetate isomerase 0.47 NIAGMN_18295 mutS DNA mismatch repair protein MutS — —
Escherichia coli ECRC99 0.41 KEDOAH_04580 maiA maleylacetoacetate isomerase 0.47 KEDOAH_07610 mutS DNA mismatch repair protein MutS — —
Escherichia coli ECRC100 0.41 OKFHMN_23605 maiA maleylacetoacetate isomerase 0.47 OKFHMN_20525 mutS DNA mismatch repair protein MutS low > 80
Escherichia coli ECRC101 0.41 MCAODC_14655 maiA maleylacetoacetate isomerase 0.47 MCAODC_11050 mutS DNA mismatch repair protein MutS low > 87
Escherichia coli ECRC62 0.41 BNILDI_14095 maiA maleylacetoacetate isomerase 0.47 BNILDI_10920 mutS DNA mismatch repair protein MutS low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF3802 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) 0.48 GFF4773 DNA mismatch repair protein MutS low > 78
Pseudomonas putida KT2440 0.40 PP_4619 Maleylacetoacetate isomerase 0.47 PP_1626 DNA mismatch repair protein MutS low > 96
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_15560 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) 0.47 AO353_16625 DNA mismatch repair protein MutS low > 101
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_4960 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) 0.47 PfGW456L13_4672 DNA mismatch repair protein MutS low > 87
Pseudomonas fluorescens FW300-N1B4 0.37 Pf1N1B4_1023 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) 0.47 Pf1N1B4_3117 DNA mismatch repair protein MutS low > 87
Pseudomonas simiae WCS417 0.37 PS417_05025 maleylacetoacetate isomerase 0.47 PS417_05680 DNA mismatch repair protein MutS low > 88
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_16835 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) 0.48 AO356_05875 DNA mismatch repair protein MutS low > 104
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_5292 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) 0.48 Pf6N2E2_3035 DNA mismatch repair protein MutS low > 103
Sinorhizobium meliloti 1021 0.36 SMc03206 maleylacetoacetate isomerase (glutathione transferase zeta 1) protein 0.31 SMc01125 DNA mismatch repair protein MutS low > 103
Caulobacter crescentus NA1000 0.35 CCNA_03683 maleylpyruvate isomerase 0.26 CCNA_00012 DNA mismatch repair protein MutS — —
Caulobacter crescentus NA1000 Δfur 0.35 CCNA_03683 maleylpyruvate isomerase 0.26 CCNA_00012 DNA mismatch repair protein MutS low > 67
Pseudomonas fluorescens SBW25-INTG 0.34 PFLU_RS05095 maleylacetoacetate isomerase 0.47 PFLU_RS05765 DNA mismatch repair protein MutS low > 109
Pseudomonas sp. RS175 0.34 PFR28_00223 Maleylpyruvate isomerase 0.47 PFR28_00429 DNA mismatch repair protein MutS low > 88
Pseudomonas fluorescens SBW25 0.34 PFLU_RS05095 maleylacetoacetate isomerase 0.47 PFLU_RS05765 DNA mismatch repair protein MutS low > 109
Phaeobacter inhibens DSM 17395 0.31 PGA1_c00380 putative maleylacetoacetate isomerase 0.31 PGA1_c35000 DNA mismatch repair protein MutS low > 62

Not shown: 0 genomes with orthologs for BPHYT_RS02805 only; 42 genomes with orthologs for BPHYT_RS12475 only