Conservation of cofitness between BPHYT_RS17380 and BPHYT_RS08955 in Burkholderia phytofirmans PsJN

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS17380 ribulose-phosphate 3-epimerase 1.0 BPHYT_RS08955 homoserine dehydrogenase 0.72 15
Paraburkholderia bryophila 376MFSha3.1 0.97 H281DRAFT_05717 ribulose-5-phosphate 3-epimerase 0.98 H281DRAFT_00810 homoserine dehydrogenase — —
Paraburkholderia graminis OAS925 0.96 ABIE53_003638 ribulose-phosphate 3-epimerase 0.95 ABIE53_002026 homoserine dehydrogenase — —
Paraburkholderia sabiae LMG 24235 0.91 QEN71_RS27540 ribulose-phosphate 3-epimerase 0.94 QEN71_RS22405 homoserine dehydrogenase — —
Cupriavidus basilensis FW507-4G11 0.80 RR42_RS18285 ribulose-phosphate 3-epimerase 0.77 RR42_RS12540 homoserine dehydrogenase — —
Ralstonia solanacearum UW163 0.77 UW163_RS07150 ribulose-phosphate 3-epimerase 0.74 UW163_RS13320 homoserine dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.77 RALBFv3_RS06475 ribulose-phosphate 3-epimerase 0.74 RALBFv3_RS15875 homoserine dehydrogenase — —
Herbaspirillum seropedicae SmR1 0.77 HSERO_RS19425 ribulose-phosphate 3-epimerase 0.73 HSERO_RS10460 homoserine dehydrogenase — —
Ralstonia solanacearum PSI07 0.77 RPSI07_RS10765 ribulose-phosphate 3-epimerase 0.74 RPSI07_RS17490 homoserine dehydrogenase — —
Ralstonia solanacearum GMI1000 0.77 RS_RS14420 ribulose-phosphate 3-epimerase 0.72 RS_RS06655 homoserine dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.77 ABZR87_RS02130 ribulose-phosphate 3-epimerase 0.75 ABZR87_RS11445 homoserine dehydrogenase — —
Dechlorosoma suillum PS 0.75 Dsui_0221 ribulose-phosphate 3-epimerase 0.72 Dsui_2907 homoserine dehydrogenase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_4611 ribulose-5-phosphate 3-epimerase 0.64 Psyr_1290 homoserine dehydrogenase — —
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_4611 ribulose-5-phosphate 3-epimerase 0.64 Psyr_1290 homoserine dehydrogenase — —
Pseudomonas stutzeri RCH2 0.69 Psest_3652 ribulose-phosphate 3-epimerase 0.64 Psest_3126 Homoserine dehydrogenase — —
Pseudomonas sp. RS175 0.69 PFR28_04049 Ribulose-phosphate 3-epimerase 0.63 PFR28_00333 Homoserine dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS27390 ribulose-phosphate 3-epimerase 0.64 PFLU_RS24550 homoserine dehydrogenase — —
Pseudomonas fluorescens SBW25 0.69 PFLU_RS27390 ribulose-phosphate 3-epimerase 0.64 PFLU_RS24550 homoserine dehydrogenase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.69 GFF2197 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) 0.72 GFF3935 Homoserine dehydrogenase (EC 1.1.1.3) — —
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_2543 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) 0.63 Pf1N1B4_3013 Homoserine dehydrogenase (EC 1.1.1.3) — —
Pseudomonas simiae WCS417 0.69 PS417_25735 ribulose-phosphate 3-epimerase 0.64 PS417_22885 homoserine dehydrogenase — —
Pseudomonas putida KT2440 0.69 PP_0415 ribulose-5-phosphate 3-epimerase 0.64 PP_1470 Homoserine dehydrogenase — —
Castellaniella sp019104865 MT123 0.68 ABCV34_RS10270 ribulose-phosphate 3-epimerase 0.58 ABCV34_RS02295 homoserine dehydrogenase — —
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_4820 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) 0.63 Pf6N2E2_3143 Homoserine dehydrogenase (EC 1.1.1.3) — —
Pseudomonas fluorescens FW300-N2C3 0.68 AO356_14410 ribulose phosphate epimerase 0.63 AO356_06375 homoserine dehydrogenase — —
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_1215 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) 0.63 PfGW456L13_1723 Homoserine dehydrogenase (EC 1.1.1.3) — —
Pseudomonas fluorescens FW300-N2E3 0.68 AO353_07240 ribulose phosphate epimerase 0.63 AO353_04355 homoserine dehydrogenase — —
Pseudomonas sp. S08-1 0.68 OH686_15115 ribulose-phosphate 3-epimerase 0.63 OH686_17760 Homoserine dehydrogenase — —
Marinobacter adhaerens HP15 0.66 HP15_3286 ribulose-phosphate 3-epimerase-like protein 0.54 HP15_764 homoserine dehydrogenase — —
Azospirillum sp. SherDot2 0.65 MPMX19_02946 Ribulose-phosphate 3-epimerase 0.43 MPMX19_00805 Homoserine dehydrogenase — —
Variovorax sp. OAS795 0.65 ABID97_RS04905 ribulose-phosphate 3-epimerase 0.71 ABID97_RS10890 homoserine dehydrogenase — —
Variovorax sp. SCN45 0.65 GFF6246 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) 0.71 GFF2801 Homoserine dehydrogenase (EC 1.1.1.3) low > 127
Acinetobacter radioresistens SK82 0.64 MPMX26_02569 Ribulose-phosphate 3-epimerase 0.50 MPMX26_00167 Homoserine dehydrogenase — —
Acidovorax sp. GW101-3H11 0.62 Ac3H11_757 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) 0.71 Ac3H11_1507 Homoserine dehydrogenase (EC 1.1.1.3) — —
Rhodospirillum rubrum S1H 0.57 Rru_A2402 Ribulose-phosphate 3-epimerase (NCBI) 0.39 Rru_A2410 Homoserine dehydrogenase (NCBI) — —
Sphingomonas koreensis DSMZ 15582 0.52 Ga0059261_2240 ribulose-phosphate 3-epimerase 0.35 Ga0059261_2711 homoserine dehydrogenase (EC 1.1.1.3) (from data) — —
Synechococcus elongatus PCC 7942 0.51 Synpcc7942_0604 rpe ribulose-phosphate 3-epimerase 0.37 Synpcc7942_2090 thrA homoserine dehydrogenase — —
Magnetospirillum magneticum AMB-1 0.50 AMB_RS06980 ribulose-phosphate 3-epimerase 0.36 AMB_RS18865 homoserine dehydrogenase — —
Caulobacter crescentus NA1000 Δfur 0.50 CCNA_00100 Ribulose-5-phosphate 3-epimerase 0.29 CCNA_01447 homoserine dehydrogenase — —
Caulobacter crescentus NA1000 0.50 CCNA_00100 Ribulose-5-phosphate 3-epimerase 0.29 CCNA_01447 homoserine dehydrogenase — —
Rhizobium sp. OAE497 0.46 ABIE40_RS10105 ribulose-phosphate 3-epimerase 0.37 ABIE40_RS08650 homoserine dehydrogenase — —
Sinorhizobium meliloti 1021 0.46 SMc00511 D-ribulose-5-phosphate 3-epimerase 0.38 SMc00293 homoserine dehydrogenase low > 103
Agrobacterium fabrum C58 0.46 Atu1839 ribulose-phosphate 3-epimerase 0.38 Atu1588 homoserine dehydrogenase — —
Azospirillum brasilense Sp245 0.45 AZOBR_RS06755 ribulose-phosphate 3-epimerase 0.42 AZOBR_RS07835 homoserine dehydrogenase — —
Dinoroseobacter shibae DFL-12 0.45 Dshi_3006 Ribulose-phosphate 3-epimerase (RefSeq) 0.36 Dshi_2273 Homoserine dehydrogenase (RefSeq) — —
Desulfovibrio vulgaris Hildenborough JW710 0.44 DVU2531 rpe ribulose-phosphate 3-epimerase (TIGR) 0.38 DVU0890 hom homoserine dehydrogenase (TIGR) — —
Rhodopseudomonas palustris CGA009 0.44 TX73_019755 ribulose-phosphate 3-epimerase 0.32 TX73_012940 homoserine dehydrogenase — —
Phaeobacter inhibens DSM 17395 0.44 PGA1_c04170 ribulose-phosphate 3-epimerase Rpe 0.32 PGA1_c08650 homoserine dehydrogenase Hom — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.40 CA264_21180 ribulose-phosphate 3-epimerase 0.21 CA264_02380 homoserine dehydrogenase low > 74
Mycobacterium tuberculosis H37Rv 0.39 Rv1408 Probable ribulose-phosphate 3-epimerase Rpe (PPE) (R5P3E) (pentose-5-phosphate 3-epimerase) 0.27 Rv1294 Probable homoserine dehydrogenase ThrA — —
Desulfovibrio vulgaris Miyazaki F 0.39 DvMF_0977 Ribulose-phosphate 3-epimerase (RefSeq) 0.36 DvMF_1412 homoserine dehydrogenase (EC 1.1.1.3) (from data) — —
Bifidobacterium breve UCC2003 0.36 BBR_RS15800 ribulose-phosphate 3-epimerase 0.33 BBR_RS19540 homoserine dehydrogenase — —

Not shown: 51 genomes with orthologs for BPHYT_RS17380 only; 1 genomes with orthologs for BPHYT_RS08955 only