Conservation of cofitness between BPHYT_RS16975 and BPHYT_RS06555 in Burkholderia phytofirmans PsJN

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS16975 shikimate 5-dehydrogenase 1.0 BPHYT_RS06555 ketol-acid reductoisomerase 0.72 20
Paraburkholderia graminis OAS925 0.93 ABIE53_003560 shikimate dehydrogenase 0.99 ABIE53_001576 ketol-acid reductoisomerase — —
Paraburkholderia bryophila 376MFSha3.1 0.90 H281DRAFT_06291 shikimate dehydrogenase (EC 1.1.1.25) 0.95 H281DRAFT_04553 ketol-acid reductoisomerase — —
Paraburkholderia sabiae LMG 24235 0.81 QEN71_RS27130 shikimate dehydrogenase 0.93 QEN71_RS24215 ketol-acid reductoisomerase 0.69 41
Ralstonia solanacearum PSI07 0.55 RPSI07_RS11300 shikimate dehydrogenase 0.91 RPSI07_RS14265 ketol-acid reductoisomerase — —
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS05945 shikimate dehydrogenase 0.92 RALBFv3_RS03040 ketol-acid reductoisomerase — —
Ralstonia solanacearum UW163 0.54 UW163_RS07680 shikimate dehydrogenase 0.92 UW163_RS10685 ketol-acid reductoisomerase — —
Ralstonia solanacearum GMI1000 0.54 RS_RS13890 shikimate dehydrogenase 0.91 RS_RS10410 ketol-acid reductoisomerase — —
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS01605 shikimate dehydrogenase 0.91 ABZR87_RS14945 ketol-acid reductoisomerase — —
Herbaspirillum seropedicae SmR1 0.51 HSERO_RS01990 shikimate 5-dehydrogenase 0.88 HSERO_RS08660 ketol-acid reductoisomerase 0.60 40
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS17645 shikimate dehydrogenase 0.91 RR42_RS05445 ketol-acid reductoisomerase — —
Pseudomonas sp. S08-1 0.47 OH686_12485 Shikimate 5-dehydrogenase I alpha 0.72 OH686_08115 ketol-acid reductoisomerase 0.74 46
Pseudomonas putida KT2440 0.47 PP_0074 shikimate 5-dehydrogenase 0.70 PP_4678 Ketol-acid reductoisomerase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_0025 shikimate dehydrogenase 0.71 Psyr_0848 ketol-acid reductoisomerase 0.68 8
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_0025 shikimate dehydrogenase 0.71 Psyr_0848 ketol-acid reductoisomerase 0.67 12
Pseudomonas sp. RS175 0.46 PFR28_04655 Shikimate dehydrogenase (NADP(+)) 0.70 PFR28_03697 Ketol-acid reductoisomerase (NADP(+)) — —
Pseudomonas simiae WCS417 0.45 PS417_00125 shikimate dehydrogenase 0.71 PS417_23800 ketol-acid reductoisomerase — —
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_11315 shikimate dehydrogenase 0.71 AO356_16180 ketol-acid reductoisomerase 0.50 37
Pseudomonas fluorescens SBW25 0.45 PFLU_RS00120 shikimate dehydrogenase 0.71 PFLU_RS25640 ketol-acid reductoisomerase — —
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS00120 shikimate dehydrogenase 0.71 PFLU_RS25640 ketol-acid reductoisomerase — —
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_1906 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.71 Pf1N1B4_2880 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.53 34
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_4130 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.70 Pf6N2E2_5177 Ketol-acid reductoisomerase (EC 1.1.1.86) — —
Marinobacter adhaerens HP15 0.45 HP15_3750 shikimate dehydrogenase 0.67 HP15_533 ketol-acid reductoisomerase — —
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_644 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.71 PfGW456L13_1540 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.79 14
Castellaniella sp019104865 MT123 0.44 ABCV34_RS11630 shikimate dehydrogenase 0.87 ABCV34_RS01220 ketol-acid reductoisomerase low > 48
Pseudomonas stutzeri RCH2 0.44 Psest_0029 shikimate 5-dehydrogenase 0.71 Psest_1038 ketol-acid reductoisomerase — —
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_10670 shikimate dehydrogenase 0.71 AO353_14505 ketol-acid reductoisomerase 0.77 7
Acidovorax sp. GW101-3H11 0.38 Ac3H11_4044 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.76 Ac3H11_527 Ketol-acid reductoisomerase (EC 1.1.1.86) — —
Variovorax sp. SCN45 0.35 GFF4456 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.85 GFF1161 Ketol-acid reductoisomerase (NADP(+)) (EC 1.1.1.86) — —
Acinetobacter radioresistens SK82 0.35 MPMX26_02748 Shikimate dehydrogenase (NADP(+)) 0.72 MPMX26_00474 Ketol-acid reductoisomerase (NADP(+)) low > 36
Variovorax sp. OAS795 0.34 ABID97_RS06300 shikimate dehydrogenase 0.85 ABID97_RS14895 ketol-acid reductoisomerase — —
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.5020.1 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.52 Xcc-8004.1060.1 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.79 33
Lysobacter sp. OAE881 0.29 ABIE51_RS01815 shikimate dehydrogenase 0.50 ABIE51_RS17545 ketol-acid reductoisomerase 0.71 17
Methanococcus maripaludis JJ 0.21 MMJJ_RS00280 shikimate dehydrogenase 0.54 MMJJ_RS01620 ketol-acid reductoisomerase — —
Methanococcus maripaludis S2 0.21 MMP_RS04855 shikimate dehydrogenase 0.54 MMP_RS03435 ketol-acid reductoisomerase — —
Rhodopseudomonas palustris CGA009 0.21 TX73_022410 shikimate dehydrogenase 0.71 TX73_010485 ketol-acid reductoisomerase — —
Sinorhizobium meliloti 1021 0.20 SMc02791 shikimate 5-dehydrogenase 0.68 SMc04346 ketol-acid reductoisomerase — —
Desulfovibrio vulgaris Hildenborough JW710 0.20 DVU0115 aroE shikimate 5-dehydrogenase (TIGR) 0.60 DVU1378 ilvC ketol-acid reductoisomerase (TIGR) — —
Synechococcus elongatus PCC 7942 0.20 Synpcc7942_2467 aroE shikimate 5-dehydrogenase 0.62 Synpcc7942_1552 ilvC ketol-acid reductoisomerase — —
Desulfovibrio vulgaris Miyazaki F 0.20 DvMF_1962 shikimate 5-dehydrogenase (RefSeq) 0.60 DvMF_0155 ketol-acid reductoisomerase (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.19 PGA1_c35150 shikimate dehydrogenase AroE 0.69 PGA1_c06580 ketol-acid reductoisomerase IlvC — —
Rhodospirillum rubrum S1H 0.19 Rru_A3613 Quinate/Shikimate 5-dehydrogenase (NCBI) 0.70 Rru_A0469 Ketol-acid reductoisomerase (NCBI) — —
Rhizobium sp. OAE497 0.19 ABIE40_RS19250 shikimate dehydrogenase 0.68 ABIE40_RS11360 ketol-acid reductoisomerase — —
Azospirillum sp. SherDot2 0.19 MPMX19_02560 Shikimate dehydrogenase (NADP(+)) 0.69 MPMX19_01774 Ketol-acid reductoisomerase (NADP(+)) — —
Azospirillum brasilense Sp245 0.18 AZOBR_RS01765 shikimate 5-dehydrogenase 0.68 AZOBR_RS06570 ketol-acid reductoisomerase — —
Caulobacter crescentus NA1000 Δfur 0.17 CCNA_00003 shikimate 5-dehydrogenase 0.70 CCNA_02204 ketol-acid reductoisomerase/2-dehydropantoate 2-reductase — —
Caulobacter crescentus NA1000 0.17 CCNA_00003 shikimate dehydrogenase (EC 1.1.1.25) (from data) 0.70 CCNA_02204 ketol-acid reductoisomerase/2-dehydropantoate 2-reductase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.15 ABZR88_RS20055 shikimate dehydrogenase 0.21 ABZR88_RS11590 ketol-acid reductoisomerase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.14 Echvi_1145 Shikimate 5-dehydrogenase 0.21 Echvi_2058 ketol-acid reductoisomerase — —
Magnetospirillum magneticum AMB-1 0.14 AMB_RS23010 shikimate dehydrogenase 0.69 AMB_RS17750 ketol-acid reductoisomerase — —
Bacteroides ovatus ATCC 8483 0.13 BACOVA_05065 putative shikimate dehydrogenase 0.20 BACOVA_03306 ketol-acid reductoisomerase — —
Mycobacterium tuberculosis H37Rv 0.11 Rv2552c Probable shikimate 5-dehydrogenase AroE (5-dehydroshikimate reductase) 0.55 Rv3001c Probable KETOL-acid reductoisomerase IlvC (acetohydroxy-acid isomeroreductase) (alpha-keto-beta-hydroxylacil reductoisomerase) — —

Not shown: 39 genomes with orthologs for BPHYT_RS16975 only; 11 genomes with orthologs for BPHYT_RS06555 only