Conservation of cofitness between Atu3727 and Atu3353 in Agrobacterium fabrum C58

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu3727 hypothetical protein 1.0 Atu3353 mannose-1-phosphate guanylyltransferase 0.51 8
Rhizobium sp. OAE497 0.87 ABIE40_RS15665 YebC/PmpR family DNA-binding transcriptional regulator 0.40 ABIE40_RS14845 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 107
Bosea sp. OAE506 0.75 ABIE41_RS09460 YebC/PmpR family DNA-binding transcriptional regulator 0.47 ABIE41_RS03100 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase — —
Phaeobacter inhibens DSM 17395 0.67 PGA1_c21770 DNA-binding regulatory protein, YebC/PmpR family 0.38 PGA1_65p00290 algA: alginate biosynthesis protein — —
Rhodopseudomonas palustris CGA009 0.67 TX73_005640 YebC/PmpR family DNA-binding transcriptional regulator 0.49 TX73_017175 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 86
Dinoroseobacter shibae DFL-12 0.64 Dshi_2762 protein of unknown function DUF28 (RefSeq) 0.38 Dshi_4146 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (RefSeq) low > 64
Azospirillum brasilense Sp245 0.61 AZOBR_RS09035 transcriptional regulator 0.43 AZOBR_RS33830 mannose-1-phosphate guanylyltransferase low > 97
Azospirillum sp. SherDot2 0.61 MPMX19_00695 putative transcriptional regulatory protein 0.40 MPMX19_06734 Alginate biosynthesis protein AlgA low > 112
Rhodospirillum rubrum S1H 0.60 Rru_A1086 hypothetical protein (RefSeq) 0.39 Rru_B0046 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (NCBI) low > 58
Magnetospirillum magneticum AMB-1 0.58 AMB_RS16265 YebC/PmpR family DNA-binding transcriptional regulator 0.41 AMB_RS00190 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase — —
Pseudomonas sp. S08-1 0.46 OH686_19120 Probable transcriptional regulatory protein YebC 0.42 OH686_02105 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 80
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_1407 Protein of unknown function DUF28 0.41 Psyr_1052 mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP) low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_1407 Protein of unknown function DUF28 0.41 Psyr_1052 mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP) low > 86
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_1850 FIG000859: hypothetical protein YebC 0.42 PfGW456L13_1674 Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) / Mannose-6-phosphate isomerase (EC 5.3.1.8) low > 87
Pseudomonas stutzeri RCH2 0.45 Psest_1494 DNA-binding regulatory protein, YebC/PmpR family 0.43 Psest_1821 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase — —
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_5534 FIG000859: hypothetical protein YebC 0.43 Pf6N2E2_5377 Mannose-6-phosphate isomerase (EC 5.3.1.8) / Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) low > 103
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_18010 hypothetical protein 0.42 AO356_17260 mannose-1-phosphate guanylyltransferase low > 104
Desulfovibrio vulgaris Hildenborough JW710 0.45 DVU2259 conserved hypothetical protein TIGR01033 (TIGR) 0.34 DVU0697 rfbA mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (TIGR) — —
Serratia liquefaciens MT49 0.44 IAI46_14635 YebC/PmpR family DNA-binding transcriptional regulator 0.41 IAI46_08070 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 86
Pseudomonas sp. RS175 0.44 PFR28_03415 Transcriptional regulatory protein PmpR 0.43 PFR28_03566 Alginate biosynthesis protein AlgA low > 88
Pseudomonas putida KT2440 0.44 PP_1214 putative transcriptional regulatory protein 0.42 PP_1277 mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase low > 96
Escherichia coli ECRC101 0.44 OKFHMN_26255 putative transcriptional regulatory protein YebC 0.41 OKFHMN_24365 manC mannose-1-phosphate guanylyltransferase ManC — —
Escherichia fergusonii Becca 0.44 EFB2_02078 putative transcriptional regulatory protein YebC 0.41 EFB2_01805 Mannose-1-phosphate guanylyltransferase 1 low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_01864 putative transcriptional regulatory protein YebC 0.41 OHPLBJKB_01666 Mannose-1-phosphate guanylyltransferase 1 low > 73
Escherichia coli ECRC62 0.44 BNILDI_15490 putative transcriptional regulatory protein YebC 0.41 BNILDI_14605 manC mannose-1-phosphate guanylyltransferase ManC — —
Escherichia coli ECRC98 0.44 JDDGAC_00830 putative transcriptional regulatory protein YebC 0.41 JDDGAC_28475 manC mannose-1-phosphate guanylyltransferase ManC — —
Escherichia coli ECOR38 0.44 HEPCGN_04665 putative transcriptional regulatory protein YebC 0.41 HEPCGN_03065 manC mannose-1-phosphate guanylyltransferase ManC low > 85
Escherichia coli ECOR27 0.44 NOLOHH_16700 putative transcriptional regulatory protein YebC 0.41 NOLOHH_15695 manC mannose-1-phosphate guanylyltransferase ManC — —
Escherichia coli ECRC102 0.44 NIAGMN_01805 putative transcriptional regulatory protein YebC 0.41 NIAGMN_22310 manC mannose-1-phosphate guanylyltransferase ManC — —
Escherichia coli Nissle 1917 0.44 ECOLIN_RS10380 YebC/PmpR family DNA-binding transcriptional regulator 0.42 ECOLIN_RS12000 mannose-1-phosphate guanyltransferase — —
Escherichia coli ECRC101 0.44 MCAODC_19150 putative transcriptional regulatory protein YebC 0.41 MCAODC_20575 manC mannose-1-phosphate guanylyltransferase ManC — —
Escherichia coli BL21 0.44 ECD_01835 UPF0082 family protein 0.41 ECD_01955 mannose-1-phosphate guanyltransferase low > 60
Escherichia coli ECRC99 0.44 KEDOAH_01850 putative transcriptional regulatory protein YebC 0.41 KEDOAH_03785 manC mannose-1-phosphate guanylyltransferase ManC — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF1645 FIG000859: hypothetical protein YebC 0.42 GFF3879 Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) / Mannose-6-phosphate isomerase (EC 5.3.1.8) low > 78
Dickeya dianthicola 67-19 0.44 HGI48_RS10095 YebC/PmpR family DNA-binding transcriptional regulator 0.40 HGI48_RS18585 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 71
Dickeya dadantii 3937 0.44 DDA3937_RS10065 YebC/PmpR family DNA-binding transcriptional regulator 0.40 DDA3937_RS18655 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 74
Desulfovibrio vulgaris Miyazaki F 0.44 DvMF_3201 hypothetical protein (RefSeq) 0.33 DvMF_2691 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (RefSeq) low > 51
Escherichia coli BW25113 0.44 b1864 yebC hypothetical protein (NCBI) 0.41 b2049 cpsB mannose-1-phosphate guanyltransferase (NCBI) low > 76
Dickeya dianthicola ME23 0.44 DZA65_RS10510 YebC/PmpR family DNA-binding transcriptional regulator 0.40 DZA65_RS19720 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 75
Pectobacterium carotovorum WPP14 0.43 HER17_RS11855 YebC/PmpR family DNA-binding transcriptional regulator 0.41 HER17_RS14525 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 75
Enterobacter asburiae PDN3 0.43 EX28DRAFT_0693 DNA-binding regulatory protein, YebC/PmpR family 0.41 EX28DRAFT_0506 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 76
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_640 FIG000859: hypothetical protein YebC 0.42 Pf1N1B4_993 Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) / Mannose-6-phosphate isomerase (EC 5.3.1.8) — —
Dechlorosoma suillum PS 0.43 Dsui_0489 DNA-binding regulatory protein, YebC/PmpR family 0.35 Dsui_0087 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 51
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_03595 hypothetical protein 0.43 AO353_04735 mannose-1-phosphate guanylyltransferase low > 101
Pseudomonas simiae WCS417 0.42 PS417_22460 hypothetical protein 0.41 PS417_04790 mannose-1-phosphate guanylyltransferase — —
Rahnella sp. WP5 0.42 EX31_RS11685 YebC/PmpR family DNA-binding transcriptional regulator 0.42 EX31_RS02880 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 89
Enterobacter sp. TBS_079 0.42 MPMX20_02769 putative transcriptional regulatory protein YebC 0.42 MPMX20_03031 Mannose-1-phosphate guanylyltransferase 1 low > 85
Pseudomonas fluorescens SBW25 0.41 PFLU_RS24100 YebC/PmpR family DNA-binding transcriptional regulator 0.43 PFLU_RS17870 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 109
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS24100 YebC/PmpR family DNA-binding transcriptional regulator 0.43 PFLU_RS17870 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 109
Cupriavidus basilensis FW507-4G11 0.41 RR42_RS04735 hypothetical protein 0.42 RR42_RS33245 mannose-1-phosphate guanyltransferase low > 128
Marinobacter adhaerens HP15 0.41 HP15_2043 protein YebC 0.42 HP15_444 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase — —
Castellaniella sp019104865 MT123 0.41 ABCV34_RS02555 YebC/PmpR family DNA-binding transcriptional regulator 0.38 ABCV34_RS12925 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase — —
Paraburkholderia bryophila 376MFSha3.1 0.40 H281DRAFT_04522 DNA-binding regulatory protein, YebC/PmpR family 0.43 H281DRAFT_04847 mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22)/mannose-6-phosphate isomerase, type 2 (EC 5.3.1.8) — —
Paraburkholderia graminis OAS925 0.40 ABIE53_001546 YebC/PmpR family DNA-binding regulatory protein 0.39 ABIE53_002179 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 113
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS06410 transcriptional regulator 0.40 BPHYT_RS31080 mannose-1-phosphate guanyltransferase — —
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS17750 transcriptional regulator 0.41 HSERO_RS10000 mannose-1-phosphate guanylyltransferase — —
Paraburkholderia sabiae LMG 24235 0.39 QEN71_RS24395 YebC/PmpR family DNA-binding transcriptional regulator 0.43 QEN71_RS25610 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 153
Ralstonia solanacearum PSI07 0.39 RPSI07_RS13685 YebC/PmpR family DNA-binding transcriptional regulator 0.35 RPSI07_RS19805 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase — —
Synechococcus elongatus PCC 7942 0.38 Synpcc7942_1017 hypothetical protein 0.41 Synpcc7942_1608 manC mannose-1-phosphate guanylyltransferase (GDP) — —
Variovorax sp. OAS795 0.38 ABID97_RS16740 YebC/PmpR family DNA-binding transcriptional regulator 0.37 ABID97_RS19170 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 91
Variovorax sp. SCN45 0.38 GFF303 Probable transcriptional regulatory protein YebC 0.36 GFF70 Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13) / Mannose-6-phosphate isomerase (EC 5.3.1.8) low > 127
Rhodanobacter denitrificans FW104-10B01 0.37 LRK54_RS04920 YebC/PmpR family DNA-binding transcriptional regulator 0.41 LRK54_RS05685 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 59
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF4523 FIG000859: hypothetical protein YebC 0.38 GFF90 Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) low > 90
Rhodanobacter denitrificans MT42 0.37 LRK55_RS04700 YebC/PmpR family DNA-binding transcriptional regulator 0.41 LRK55_RS05440 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 0.75 10
Lysobacter sp. OAE881 0.37 ABIE51_RS05035 YebC/PmpR family DNA-binding transcriptional regulator 0.37 ABIE51_RS04370 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 62
Rhodanobacter sp. FW510-T8 0.36 OKGIIK_01830 tACO1 YebC/PmpR family DNA-binding transcriptional regulator 0.41 OKGIIK_01155 cpsB mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 52
Xanthomonas campestris pv. campestris strain 8004 0.34 Xcc-8004.1434.1 FIG000859: hypothetical protein YebC 0.41 Xcc-8004.4481.1 hypothetical protein low > 74
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS10850 YebC/PmpR family DNA-binding transcriptional regulator 0.41 ABZR86_RS18715 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase — —
Alteromonas macleodii MIT1002 0.29 MIT1002_00845 putative transcriptional regulatory protein YeeN 0.42 MIT1002_03581 Mannose-1-phosphate guanylyltransferase 1 low > 70
Vibrio cholerae E7946 ATCC 55056 0.29 CSW01_14085 transcriptional regulator 0.41 CSW01_01270 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 62

Not shown: 32 genomes with orthologs for Atu3727 only; 0 genomes with orthologs for Atu3353 only