| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Agrobacterium fabrum C58 | 1.0 | Atu0768 | | cytochrome-c oxidase chain I | 1.0 | Atu2239 | | ubiquinol-cytochrome C reductase iron-sulfur subunit | 0.48 | 15 |
| Rhizobium sp. OAE497 | 0.84 | ABIE40_RS04065 | | cytochrome c oxidase subunit I | 0.83 | ABIE40_RS13130 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.88 | 9 |
| Sinorhizobium meliloti 1021 | 0.83 | SMc00010 | | cytochrome C oxidase polypeptide I transmembrane protein | 0.83 | SMc00187 | | ubiquinol-cytochrome C reductase iron-sulfur subunit protein | 0.29 | 93 |
| Rhodopseudomonas palustris CGA009 | 0.71 | TX73_004290 | | cytochrome c oxidase subunit I | 0.50 | TX73_006120 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Bosea sp. OAE506 | 0.69 | ABIE41_RS22950 | | cytochrome c oxidase subunit I | 0.49 | ABIE41_RS11190 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.67 | 30 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.68 | A4249_RS00110 | | cytochrome c oxidase subunit I | 0.46 | A4249_RS02560 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.55 | 34 |
| Caulobacter crescentus NA1000 Δfur | 0.68 | CCNA_03517 | | cytochrome c oxidase polypeptide I coxA | 0.48 | CCNA_00505 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | low | > 67 |
| Caulobacter crescentus NA1000 | 0.68 | CCNA_03517 | | cytochrome c oxidase polypeptide I coxA | 0.48 | CCNA_00505 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.85 | 17 |
| Magnetospirillum magneticum AMB-1 | 0.66 | AMB_RS10960 | | cytochrome c oxidase subunit I | 0.54 | AMB_RS20675 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Azospirillum brasilense Sp245 | 0.65 | AZOBR_RS10585 | | cytochrome C oxidase subunit I | 0.57 | AZOBR_RS20745 | | ubiquinol-cytochrome C reductase | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.65 | Ga0059261_2008 | | cytochrome c oxidase, subunit I | 0.50 | Ga0059261_3219 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit | 0.56 | 14 |
| Azospirillum sp. SherDot2 | 0.65 | MPMX19_00885 | | Cytochrome c oxidase subunit 1 | 0.58 | MPMX19_05012 | | Ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Dinoroseobacter shibae DFL-12 | 0.59 | Dshi_2383 | | Cytochrome c oxidase subunit I type (RefSeq) | 0.52 | Dshi_3278 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit (RefSeq) | — | — |
| Phaeobacter inhibens DSM 17395 | 0.59 | PGA1_c06710 | | cytochrome c oxidase subunit 1-beta | 0.45 | PGA1_c34000 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Ralstonia solanacearum PSI07 | 0.54 | RPSI07_RS22360 | | cytochrome c oxidase subunit I | 0.25 | RPSI07_RS10505 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Ralstonia solanacearum GMI1000 | 0.54 | RS_RS01790 | | cytochrome c oxidase subunit I | 0.25 | RS_RS14675 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.36 | 23 |
| Ralstonia solanacearum UW163 | 0.53 | UW163_RS02630 | | cytochrome c oxidase subunit I | 0.25 | UW163_RS06885 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.53 | RALBFv3_RS10950 | | cytochrome c oxidase subunit I | 0.25 | RALBFv3_RS06730 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Ralstonia sp. UNC404CL21Col | 0.53 | ABZR87_RS06800 | | cytochrome c oxidase subunit I | 0.24 | ABZR87_RS02385 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.63 | 61 |
| Rhodanobacter sp. FW510-T8 | 0.52 | OKGIIK_16520 | ctaD | cytochrome c oxidase subunit I | 0.31 | OKGIIK_03005 | petA | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Rhodanobacter denitrificans MT42 | 0.52 | LRK55_RS06860 | | cytochrome c oxidase subunit I | 0.31 | LRK55_RS13480 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.52 | LRK54_RS07120 | | cytochrome c oxidase subunit I | 0.31 | LRK54_RS13765 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.52 | RR42_RS01880 | | cytochrome oxidase subunit I | 0.30 | RR42_RS18825 | | ubiquinol-cytochrome C reductase | 0.76 | 8 |
| Variovorax sp. OAS795 | 0.51 | ABID97_RS23960 | | cytochrome c oxidase subunit I | 0.29 | ABID97_RS22985 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.85 | 11 |
| Variovorax sp. SCN45 | 0.51 | GFF2298 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.29 | GFF6694 | | Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) | low | > 127 |
| Marinobacter adhaerens HP15 | 0.51 | HP15_3772 | | cytochrome c oxidase, subunit I | 0.28 | HP15_545 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.51 | QEN71_RS01500 | | cytochrome c oxidase subunit I | 0.31 | QEN71_RS32270 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | low | > 153 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.51 | GFF689 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.26 | GFF1295 | | Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.51 | H281DRAFT_01993 | | cytochrome c oxidase subunit 1 | 0.30 | H281DRAFT_05669 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Burkholderia phytofirmans PsJN | 0.51 | BPHYT_RS02645 | | cytochrome oxidase subunit I | 0.30 | BPHYT_RS17630 | | ubiquinol-cytochrome C reductase | — | — |
| Pseudomonas simiae WCS417 | 0.51 | PS417_00305 | | cytochrome oxidase subunit I | 0.28 | PS417_04155 | | ubiquinol-cytochrome C reductase | — | — |
| Paraburkholderia graminis OAS925 | 0.51 | ABIE53_000674 | | cytochrome c oxidase subunit 1 | 0.30 | ABIE53_003685 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | low | > 113 |
| Pseudomonas fluorescens SBW25-INTG | 0.51 | PFLU_RS00295 | | cytochrome c oxidase subunit I | 0.29 | PFLU_RS04195 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.26 | 37 |
| Pseudomonas fluorescens SBW25 | 0.51 | PFLU_RS00295 | | cytochrome c oxidase subunit I | 0.29 | PFLU_RS04195 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | low | > 109 |
| Dyella japonica UNC79MFTsu3.2 | 0.50 | ABZR86_RS12925 | | cytochrome c oxidase subunit I | 0.32 | ABZR86_RS09880 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.64 | 15 |
| Pseudomonas fluorescens FW300-N2E3 | 0.50 | AO353_10835 | | cytochrome oxidase subunit I | 0.31 | AO353_15245 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.50 | Pf6N2E2_4099 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.31 | Pf6N2E2_5337 | | Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) | low | > 103 |
| Castellaniella sp019104865 MT123 | 0.50 | ABCV34_RS13270 | | cytochrome c oxidase subunit I | 0.28 | ABCV34_RS12635 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.50 | Xcc-8004.4845.1 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.29 | Xcc-8004.2228.1 | | Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) | low | > 74 |
| Pseudomonas fluorescens FW300-N2C3 | 0.50 | AO356_11165 | | cytochrome oxidase subunit I | 0.31 | AO356_17065 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.50 | Pf1N1B4_1854 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.31 | Pf1N1B4_962 | | Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) | 0.29 | 6 |
| Pseudomonas sp. RS175 | 0.50 | PFR28_04690 | | Cytochrome c oxidase subunit 1 | 0.30 | PFR28_03606 | | Ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Herbaspirillum seropedicae SmR1 | 0.50 | HSERO_RS20785 | | cytochrome oxidase subunit I | 0.27 | HSERO_RS20245 | | ubiquinol-cytochrome C reductase | — | — |
| Pseudomonas sp. S08-1 | 0.50 | OH686_12320 | | cytochrome c oxidase, subunit I | 0.29 | OH686_08390 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit | — | — |
| Pseudomonas stutzeri RCH2 | 0.50 | Psest_4327 | | cytochrome c oxidase, subunit I | 0.29 | Psest_3279 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit | — | — |
| Shewanella amazonensis SB2B | 0.49 | Sama_3484 | | cytochrome-c oxidase (RefSeq) | 0.27 | Sama_3021 | | ubiquinol--cytochrome-c reductase (RefSeq) | low | > 62 |
| Pseudomonas putida KT2440 | 0.49 | PP_0104 | | Cytochrome c oxidase subunit 1 | 0.29 | PP_1317 | | Ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.16 | 54 |
| Shewanella loihica PV-4 | 0.49 | Shew_0124 | | cytochrome-c oxidase (RefSeq) | 0.27 | Shew_0570 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit (RefSeq) | low | > 60 |
| Lysobacter sp. OAE881 | 0.49 | ABIE51_RS19205 | | cytochrome c oxidase subunit I | 0.30 | ABIE51_RS15440 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.96 | 13 |
| Shewanella oneidensis MR-1 | 0.49 | SO4607 | | cytochrome c oxidase, subunit I (NCBI ptt file) | 0.27 | SO0608 | petA | ubiquinol-cytochrome c reductase, iron-sulfur subunit (NCBI ptt file) | — | — |
| Shewanella sp. ANA-3 | 0.49 | Shewana3_3992 | | cytochrome c oxidase, subunit I (RefSeq) | 0.28 | Shewana3_0601 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit (RefSeq) | — | — |
| Kangiella aquimarina DSM 16071 | 0.48 | B158DRAFT_0136 | | cytochrome c oxidase, subunit I | 0.29 | B158DRAFT_1672 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit | low | > 40 |
| Alteromonas macleodii MIT1002 | 0.48 | MIT1002_04034 | | Cytochrome c oxidase subunit 1 | 0.29 | MIT1002_00814 | | Ubiquinol-cytochrome c reductase iron-sulfur subunit | low | > 70 |
Not shown: 10 genomes with orthologs for Atu0768 only; 3 genomes with orthologs for Atu2239 only