| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Agrobacterium fabrum C58 | 1.0 | Atu0768 | | cytochrome-c oxidase chain I | 1.0 | Atu2238 | | ubiquinol-cytochrome c reductase cytochrome b subunit | 0.56 | 7 |
| Rhizobium sp. OAE497 | 0.84 | ABIE40_RS04065 | | cytochrome c oxidase subunit I | 0.91 | ABIE40_RS13125 | | cytochrome b N-terminal domain-containing protein | 0.95 | 2 |
| Sinorhizobium meliloti 1021 | 0.83 | SMc00010 | | cytochrome C oxidase polypeptide I transmembrane protein | 0.92 | SMc00188 | | cytochrome B transmembrane protein | 0.47 | 3 |
| Bosea sp. OAE506 | 0.69 | ABIE41_RS22950 | | cytochrome c oxidase subunit I | 0.65 | ABIE41_RS11195 | | cytochrome b/b6 | 0.82 | 6 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.68 | A4249_RS00110 | | cytochrome c oxidase subunit I | 0.57 | A4249_RS02565 | | cytochrome b N-terminal domain-containing protein | 0.72 | 5 |
| Caulobacter crescentus NA1000 | 0.68 | CCNA_03517 | | cytochrome c oxidase polypeptide I coxA | 0.65 | CCNA_00506 | | cytochrome b | 0.94 | 3 |
| Caulobacter crescentus NA1000 Δfur | 0.68 | CCNA_03517 | | cytochrome c oxidase polypeptide I coxA | 0.65 | CCNA_00506 | | cytochrome b | low | > 67 |
| Azospirillum brasilense Sp245 | 0.65 | AZOBR_RS10585 | | cytochrome C oxidase subunit I | 0.59 | AZOBR_RS20750 | | cytochrome B | low | > 97 |
| Sphingomonas koreensis DSMZ 15582 | 0.65 | Ga0059261_2008 | | cytochrome c oxidase, subunit I | 0.62 | Ga0059261_3220 | | Cytochrome b subunit of the bc complex | 0.80 | 5 |
| Azospirillum sp. SherDot2 | 0.65 | MPMX19_00885 | | Cytochrome c oxidase subunit 1 | 0.61 | MPMX19_05013 | | Cytochrome b | low | > 112 |
| Dinoroseobacter shibae DFL-12 | 0.59 | Dshi_2383 | | Cytochrome c oxidase subunit I type (RefSeq) | 0.57 | Dshi_3277 | | Cytochrome b/b6 domain (RefSeq) | — | — |
| Phaeobacter inhibens DSM 17395 | 0.59 | PGA1_c06710 | | cytochrome c oxidase subunit 1-beta | 0.58 | PGA1_c33990 | | cytochrome b | — | — |
| Ralstonia solanacearum PSI07 | 0.54 | RPSI07_RS22360 | | cytochrome c oxidase subunit I | 0.38 | RPSI07_RS10510 | | cytochrome b | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.54 | RS_RS01790 | | cytochrome c oxidase subunit I | 0.38 | RS_RS14670 | | cytochrome b | 0.34 | 30 |
| Ralstonia solanacearum IBSBF1503 | 0.53 | RALBFv3_RS10950 | | cytochrome c oxidase subunit I | 0.40 | RALBFv3_RS06725 | | cytochrome b | low | > 76 |
| Ralstonia solanacearum UW163 | 0.53 | UW163_RS02630 | | cytochrome c oxidase subunit I | 0.40 | UW163_RS06890 | | cytochrome b | — | — |
| Ralstonia sp. UNC404CL21Col | 0.53 | ABZR87_RS06800 | | cytochrome c oxidase subunit I | 0.38 | ABZR87_RS02380 | | cytochrome bc complex cytochrome b subunit | 0.70 | 31 |
| Rhodanobacter sp. FW510-T8 | 0.52 | OKGIIK_16520 | ctaD | cytochrome c oxidase subunit I | 0.34 | OKGIIK_03010 | qcrB,petB | cytochrome b | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.52 | LRK54_RS07120 | | cytochrome c oxidase subunit I | 0.36 | LRK54_RS13770 | | cytochrome bc complex cytochrome b subunit | — | — |
| Rhodanobacter denitrificans MT42 | 0.52 | LRK55_RS06860 | | cytochrome c oxidase subunit I | 0.36 | LRK55_RS13485 | | cytochrome bc complex cytochrome b subunit | low | > 63 |
| Cupriavidus basilensis FW507-4G11 | 0.52 | RR42_RS01880 | | cytochrome oxidase subunit I | 0.40 | RR42_RS18820 | | cytochrome B | 0.77 | 7 |
| Variovorax sp. OAS795 | 0.51 | ABID97_RS23960 | | cytochrome c oxidase subunit I | 0.39 | ABID97_RS22980 | | cytochrome bc complex cytochrome b subunit | 0.88 | 8 |
| Variovorax sp. SCN45 | 0.51 | GFF2298 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.39 | GFF6695 | | Ubiquinol-cytochrome C reductase, cytochrome B subunit (EC 1.10.2.2) | 0.95 | 4 |
| Marinobacter adhaerens HP15 | 0.51 | HP15_3772 | | cytochrome c oxidase, subunit I | 0.39 | HP15_546 | | ubiquinol-cytochrome c reductase, cytochrome b | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.51 | QEN71_RS01500 | | cytochrome c oxidase subunit I | 0.39 | QEN71_RS27780 | | cytochrome bc complex cytochrome b subunit | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.51 | GFF689 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.41 | GFF1294 | | Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) | low | > 90 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.51 | H281DRAFT_01993 | | cytochrome c oxidase subunit 1 | 0.40 | H281DRAFT_05670 | | ubiquinol-cytochrome c reductase cytochrome b subunit | — | — |
| Burkholderia phytofirmans PsJN | 0.51 | BPHYT_RS02645 | | cytochrome oxidase subunit I | 0.40 | BPHYT_RS17625 | | cytochrome B | — | — |
| Pseudomonas simiae WCS417 | 0.51 | PS417_00305 | | cytochrome oxidase subunit I | 0.38 | PS417_04160 | | cytochrome B | — | — |
| Paraburkholderia graminis OAS925 | 0.51 | ABIE53_000674 | | cytochrome c oxidase subunit 1 | 0.38 | ABIE53_003684 | | ubiquinol-cytochrome c reductase cytochrome b subunit | 0.47 | 59 |
| Pseudomonas fluorescens SBW25-INTG | 0.51 | PFLU_RS00295 | | cytochrome c oxidase subunit I | 0.38 | PFLU_RS04200 | | cytochrome bc complex cytochrome b subunit | 0.29 | 25 |
| Pseudomonas fluorescens SBW25 | 0.51 | PFLU_RS00295 | | cytochrome c oxidase subunit I | 0.38 | PFLU_RS04200 | | cytochrome bc complex cytochrome b subunit | low | > 109 |
| Acidovorax sp. GW101-3H11 | 0.50 | Ac3H11_3891 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.41 | Ac3H11_4751 | | Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.50 | ABZR86_RS12925 | | cytochrome c oxidase subunit I | 0.34 | ABZR86_RS01575 | | cytochrome bc complex cytochrome b subunit | low | > 74 |
| Pseudomonas fluorescens FW300-N2E3 | 0.50 | AO353_10835 | | cytochrome oxidase subunit I | 0.40 | AO353_15250 | | cytochrome B | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.50 | Pf6N2E2_4099 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.39 | Pf6N2E2_5338 | | Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) | low | > 103 |
| Castellaniella sp019104865 MT123 | 0.50 | ABCV34_RS13270 | | cytochrome c oxidase subunit I | 0.40 | ABCV34_RS12630 | | cytochrome bc complex cytochrome b subunit | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.50 | AO356_11165 | | cytochrome oxidase subunit I | 0.39 | AO356_17070 | | cytochrome B | low | > 104 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.50 | Xcc-8004.4845.1 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.38 | Xcc-8004.2229.1 | | Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) | low | > 74 |
| Pseudomonas sp. RS175 | 0.50 | PFR28_04690 | | Cytochrome c oxidase subunit 1 | 0.39 | PFR28_03605 | | Cytochrome b | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.50 | Pf1N1B4_1854 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.39 | Pf1N1B4_961 | | Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) | 0.31 | 4 |
| Pseudomonas fluorescens GW456-L13 | 0.50 | PfGW456L13_614 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.39 | PfGW456L13_1635 | | Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) | low | > 87 |
| Pseudomonas sp. S08-1 | 0.50 | OH686_12320 | | cytochrome c oxidase, subunit I | 0.39 | OH686_08385 | | Ubiquinol-cytochrome C reductase, cytochrome B subunit | — | — |
| Herbaspirillum seropedicae SmR1 | 0.50 | HSERO_RS20785 | | cytochrome oxidase subunit I | 0.39 | HSERO_RS20240 | | cytochrome B | low | > 78 |
| Pseudomonas stutzeri RCH2 | 0.50 | Psest_4327 | | cytochrome c oxidase, subunit I | 0.38 | Psest_3278 | | Cytochrome b subunit of the bc complex | — | — |
| Pseudomonas putida KT2440 | 0.49 | PP_0104 | | Cytochrome c oxidase subunit 1 | 0.39 | PP_1318 | | Cytochrome b | 0.22 | 18 |
| Shewanella amazonensis SB2B | 0.49 | Sama_3484 | | cytochrome-c oxidase (RefSeq) | 0.39 | Sama_3020 | | ubiquinol-cytochrome c reductase, cytochrome b (RefSeq) | low | > 62 |
| Lysobacter sp. OAE881 | 0.49 | ABIE51_RS19205 | | cytochrome c oxidase subunit I | 0.38 | ABIE51_RS15435 | | cytochrome bc complex cytochrome b subunit | 0.98 | 2 |
| Shewanella loihica PV-4 | 0.49 | Shew_0124 | | cytochrome-c oxidase (RefSeq) | 0.38 | Shew_0571 | | cytochrome b/b6 domain-containing protein (RefSeq) | low | > 60 |
| Shewanella oneidensis MR-1 | 0.49 | SO4607 | | cytochrome c oxidase, subunit I (NCBI ptt file) | 0.38 | SO0609 | petB | ubiquinol-cytochrome c reductase, cytochrome b (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.49 | Shewana3_3992 | | cytochrome c oxidase, subunit I (RefSeq) | 0.38 | Shewana3_0602 | | cytochrome b/b6 domain-containing protein (RefSeq) | low | > 73 |
| Kangiella aquimarina DSM 16071 | 0.48 | B158DRAFT_0136 | | cytochrome c oxidase, subunit I | 0.39 | B158DRAFT_2101 | | Cytochrome b subunit of the bc complex | low | > 40 |
| Alteromonas macleodii MIT1002 | 0.48 | MIT1002_04034 | | Cytochrome c oxidase subunit 1 | 0.39 | MIT1002_00815 | | Cytochrome b/c1 | low | > 70 |
Not shown: 10 genomes with orthologs for Atu0768 only; 3 genomes with orthologs for Atu2238 only