| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens FW300-N2E3 | 1.0 | AO353_19135 | | aromatic ring-opening dioxygenase LigB | 1.0 | AO353_20340 | | gamma-carboxygeranoyl-CoA hydratase | 0.28 | 19 |
| Pseudomonas fluorescens GW456-L13 | 0.85 | PfGW456L13_2248 | | FIG074102: hypothetical protein | 0.89 | PfGW456L13_2589 | | Methylglutaconyl-CoA hydratase (EC 4.2.1.18) | low | > 87 |
| Pseudomonas simiae WCS417 | 0.85 | PS417_08545 | | aromatic ring-opening dioxygenase LigB | 0.90 | PS417_17025 | | gamma-carboxygeranoyl-CoA hydratase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.84 | Pf1N1B4_264 | | FIG074102: hypothetical protein | 0.91 | Pf1N1B4_3985 | | Methylglutaconyl-CoA hydratase (EC 4.2.1.18) | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.84 | AO356_03105 | | aromatic ring-opening dioxygenase LigB | 0.88 | AO356_01590 | | Methylglutaconyl-CoA hydratase (EC 4.2.1.18) (from data) | low | > 104 |
| Pseudomonas fluorescens SBW25-INTG | 0.84 | PFLU_RS08495 | | dioxygenase | 0.89 | PFLU_RS18975 | | gamma-carboxygeranoyl-CoA hydratase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.84 | PFLU_RS08495 | | dioxygenase | 0.89 | PFLU_RS18975 | | gamma-carboxygeranoyl-CoA hydratase | low | > 109 |
| Pseudomonas fluorescens FW300-N2E2 | 0.83 | Pf6N2E2_2449 | | FIG074102: hypothetical protein | 0.89 | Pf6N2E2_2193 | | Methylglutaconyl-CoA hydratase (EC 4.2.1.18) (from data) | low | > 103 |
| Pseudomonas sp. RS175 | 0.81 | PFR28_00981 | | 4,5-DOPA dioxygenase extradiol | 0.88 | PFR28_01258 | | 1,4-dihydroxy-2-naphthoyl-CoA synthase | low | > 88 |
| Pseudomonas syringae pv. syringae B728a | 0.79 | Psyr_3618 | | Catalytic LigB subunit of aromatic ring-opening dioxygenase | 0.81 | Psyr_2468 | | Enoyl-CoA hydratase/isomerase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.79 | Psyr_3618 | | Catalytic LigB subunit of aromatic ring-opening dioxygenase | 0.81 | Psyr_2468 | | Enoyl-CoA hydratase/isomerase | 0.48 | 65 |
| Pseudomonas putida KT2440 | 0.76 | PP_1869 | | 4,5-DOPA-dioxygenase | 0.78 | PP_4066 | | methylglutaconyl-CoA hydratase | low | > 96 |
| Pseudomonas sp. S08-1 | 0.74 | OH686_22555 | | hypothetical protein | 0.78 | OH686_00845 | | Methylglutaconyl-CoA hydratase | low | > 80 |
| Rhodanobacter sp. FW510-T8 | 0.54 | OKGIIK_09710 | | Dioxygenase | 0.34 | OKGIIK_09325 | | Enoyl-CoA hydratase | — | — |
| Acinetobacter radioresistens SK82 | 0.53 | MPMX26_02302 | | 4,5-DOPA dioxygenase extradiol | 0.40 | MPMX26_00630 | | 2,3-dehydroadipyl-CoA hydratase | low | > 36 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.53 | Xcc-8004.4645.1 | | FIG074102: hypothetical protein | 0.32 | Xcc-8004.2922.1 | | Methylglutaconyl-CoA hydratase (EC 4.2.1.18) | low | > 74 |
| Dyella japonica UNC79MFTsu3.2 | 0.51 | ABZR86_RS08995 | | class III extradiol ring-cleavage dioxygenase | 0.35 | ABZR86_RS20610 | | enoyl-CoA hydratase-related protein | — | — |
| Herbaspirillum seropedicae SmR1 | 0.49 | HSERO_RS02940 | | hypothetical protein | 0.42 | HSERO_RS15435 | | enoyl-CoA hydratase | low | > 78 |
| Dechlorosoma suillum PS | 0.49 | Dsui_2354 | | hypothetical protein | 0.39 | Dsui_0981 | | enoyl-CoA hydratase/carnithine racemase | — | — |
| Lysobacter sp. OAE881 | 0.47 | ABIE51_RS06095 | | class III extradiol ring-cleavage dioxygenase | 0.36 | ABIE51_RS13190 | | enoyl-CoA hydratase-related protein | — | — |
| Ralstonia sp. UNC404CL21Col | 0.47 | ABZR87_RS05290 | | class III extradiol ring-cleavage dioxygenase | 0.39 | ABZR87_RS06270 | | enoyl-CoA hydratase/isomerase family protein | low | > 80 |
| Rhodanobacter denitrificans MT42 | 0.47 | LRK55_RS12505 | | class III extradiol ring-cleavage dioxygenase | 0.37 | LRK55_RS02030 | | enoyl-CoA hydratase-related protein | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.46 | LRK54_RS12805 | | dioxygenase | 0.37 | LRK54_RS02275 | | enoyl-CoA hydratase-related protein | low | > 59 |
| Cupriavidus basilensis FW507-4G11 | 0.46 | RR42_RS19600 | | aromatic ring-opening dioxygenase LigB | 0.39 | RR42_RS26900 | | enoyl-CoA hydratase | low | > 128 |
| Acidovorax sp. GW101-3H11 | 0.46 | Ac3H11_31 | | FIG074102: hypothetical protein | 0.37 | Ac3H11_3014 | | Methylglutaconyl-CoA hydratase (EC 4.2.1.18) | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.45 | H281DRAFT_05688 | | Aromatic ring-opening dioxygenase, catalytic subunit, LigB family | 0.36 | H281DRAFT_01344 | | methylglutaconyl-CoA hydratase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.45 | QEN71_RS27690 | | class III extradiol ring-cleavage dioxygenase | 0.36 | QEN71_RS12860 | | enoyl-CoA hydratase/isomerase family protein | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.44 | BPHYT_RS17535 | | extradiol ring-cleavage dioxygenase class III protein subunit B | 0.35 | BPHYT_RS23270 | | enoyl-CoA hydratase | low | > 109 |
| Marinobacter adhaerens HP15 | 0.43 | HP15_934 | | extradiol ring-cleavage dioxygenase, class III enzyme, subunit B | 0.39 | HP15_4180 | | enoyl-CoA hydratase/isomerase | low | > 73 |
| Shewanella loihica PV-4 | 0.43 | Shew_2275 | | extradiol ring-cleavage dioxygenase III subunit B (RefSeq) | 0.42 | Shew_2572 | | enoyl-CoA hydratase/isomerase (RefSeq) | low | > 60 |
| Ralstonia solanacearum UW163 | 0.42 | UW163_RS04110 | | dioxygenase | 0.38 | UW163_RS03110 | | enoyl-CoA hydratase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.42 | RALBFv3_RS09470 | | dioxygenase | 0.38 | RALBFv3_RS10470 | | enoyl-CoA hydratase | low | > 76 |
| Ralstonia solanacearum GMI1000 | 0.42 | RS_RS00070 | | dioxygenase | 0.38 | RS_RS01310 | | enoyl-CoA hydratase | 0.32 | 29 |
| Ralstonia solanacearum PSI07 | 0.42 | RPSI07_RS23880 | | dioxygenase | 0.38 | RPSI07_RS22845 | | enoyl-CoA hydratase | low | > 81 |
| Paraburkholderia graminis OAS925 | 0.42 | ABIE53_003667 | | 4,5-DOPA dioxygenase extradiol | 0.36 | ABIE53_005467 | | methylglutaconyl-CoA hydratase | low | > 113 |
| Shewanella amazonensis SB2B | 0.42 | Sama_0409 | | hypothetical protein (RefSeq) | 0.41 | Sama_1360 | | enoyl-CoA hydratase/isomerase (RefSeq) | low | > 62 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.41 | GFF462 | | FIG074102: hypothetical protein | 0.39 | GFF1713 | | Methylglutaconyl-CoA hydratase (EC 4.2.1.18) | low | > 90 |
| Rhodospirillum rubrum S1H | 0.40 | Rru_A0209 | | Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B (NCBI) | 0.37 | Rru_A1942 | | Enoyl-CoA hydratase/isomerase (NCBI) | low | > 58 |
| Azospirillum brasilense Sp245 | 0.39 | AZOBR_RS05290 | | extradiol ring-cleavage dioxygenase | 0.40 | AZOBR_RS22290 | | enoyl-CoA hydratase | — | — |
| Shewanella sp. ANA-3 | 0.37 | Shewana3_1685 | | extradiol ring-cleavage dioxygenase III subunit B (RefSeq) | 0.41 | Shewana3_1670 | | methylglutaconyl-CoA hydratase (RefSeq) | low | > 73 |
| Magnetospirillum magneticum AMB-1 | 0.36 | AMB_RS01145 | | dioxygenase | 0.41 | AMB_RS03470 | | enoyl-CoA hydratase | low | > 64 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.36 | CA265_RS21405 | | 4,5-DOPA dioxygenase extradiol | 0.23 | CA265_RS09125 | | Methylglutaconyl-CoA hydratase (EC 4.2.1.18) (from data) | low | > 88 |
| Azospirillum sp. SherDot2 | 0.36 | MPMX19_00554 | | 4,5-DOPA dioxygenase extradiol | 0.43 | MPMX19_03939 | | Enoyl-CoA-hydratase | low | > 112 |
| Variovorax sp. SCN45 | 0.36 | GFF5260 | | Uncharacterized protein ygiD | 0.37 | GFF2010 | | Methylglutaconyl-CoA hydratase (EC 4.2.1.18) | low | > 127 |
| Caulobacter crescentus NA1000 | 0.36 | CCNA_03053 | | dioxygenase | 0.33 | CCNA_02251 | | methylglutaconyl-CoA hydratase | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.36 | CCNA_03053 | | dioxygenase | 0.33 | CCNA_02251 | | methylglutaconyl-CoA hydratase | low | > 67 |
| Shewanella oneidensis MR-1 | 0.36 | SO1909 | | conserved hypothetical protein (NCBI ptt file) | 0.42 | SO1895 | | enoyl-CoA hydratase/isomerase family protein (NCBI ptt file) | low | > 76 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.34 | CA264_02195 | | dioxygenase | 0.26 | CA264_10930 | | methylglutaconyl-CoA hydratase | low | > 74 |
| Variovorax sp. OAS795 | 0.34 | ABID97_RS07060 | | 4,5-DOPA dioxygenase extradiol | 0.37 | ABID97_RS25125 | | enoyl-CoA hydratase/isomerase family protein | low | > 91 |
| Kangiella aquimarina DSM 16071 | 0.34 | B158DRAFT_1959 | | Uncharacterized conserved protein | 0.41 | B158DRAFT_2508 | | Enoyl-CoA hydratase/carnithine racemase | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.33 | Echvi_4002 | | Uncharacterized conserved protein | 0.24 | Echvi_0343 | | Enoyl-CoA hydratase/carnithine racemase | low | > 79 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.31 | A4249_RS04875 | | 4,5-DOPA dioxygenase extradiol | 0.33 | A4249_RS03800 | | enoyl-CoA hydratase-related protein | — | — |
| Pseudomonas stutzeri RCH2 | 0.31 | Psest_2164 | | Uncharacterized conserved protein | 0.67 | Psest_1082 | | Enoyl-CoA hydratase/carnithine racemase | low | > 67 |
| Rhodopseudomonas palustris CGA009 | 0.29 | TX73_022210 | | class III extradiol ring-cleavage dioxygenase | 0.23 | TX73_011065 | | enoyl-CoA hydratase/isomerase family protein | low | > 86 |
| Alteromonas macleodii MIT1002 | 0.27 | MIT1002_02162 | | LigB family dioxygenase | 0.45 | MIT1002_01667 | | putative enoyl-CoA hydratase echA8 | low | > 70 |
Not shown: 28 genomes with orthologs for AO353_19135 only; 6 genomes with orthologs for AO353_20340 only