Conservation of cofitness between ABZR87_RS18040 and ABZR87_RS22275 in Ralstonia sp. UNC404CL21Col

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia sp. UNC404CL21Col 1.0 ABZR87_RS18040 RNA polymerase sigma factor FliA 1.0 ABZR87_RS22275 flagellar hook protein FlgE 0.96 1
Ralstonia solanacearum GMI1000 0.96 RS_RS23830 RNA polymerase sigma factor FliA 0.92 RS_RS18810 flagellar hook protein FlgE low > 80
Ralstonia solanacearum UW163 0.96 UW163_RS21665 RNA polymerase sigma factor FliA 0.90 UW163_RS17460 flagellar hook protein FlgE — —
Ralstonia solanacearum IBSBF1503 0.96 RALBFv3_RS17485 RNA polymerase sigma factor FliA 0.90 RALBFv3_RS21725 flagellar hook protein FlgE low > 76
Ralstonia solanacearum PSI07 0.95 RPSI07_RS06165 RNA polymerase sigma factor FliA 0.92 RPSI07_RS01405 flagellar hook protein FlgE low > 81
Paraburkholderia sabiae LMG 24235 0.59 QEN71_RS28940 RNA polymerase sigma factor FliA 0.40 QEN71_RS39330 flagellar hook protein FlgE low > 153
Burkholderia phytofirmans PsJN 0.58 BPHYT_RS18925 RNA polymerase sigma70 0.37 BPHYT_RS11995 flagellar hook protein FlgE low > 109
Herbaspirillum seropedicae SmR1 0.57 HSERO_RS10160 flagellar biosynthesis sigma factor 0.39 HSERO_RS17660 flagellar hook protein FlgE low > 78
Dechlorosoma suillum PS 0.57 Dsui_1726 RNA polymerase sigma factor, FliA/WhiG family 0.40 Dsui_1735 flagellar hook-basal body proteins low > 51
Hydrogenophaga sp. GW460-11-11-14-LB1 0.54 GFF1428 RNA polymerase sigma factor for flagellar operon 0.35 GFF1412 Flagellar hook protein FlgE low > 90
Variovorax sp. SCN45 0.52 GFF5774 RNA polymerase sigma factor for flagellar operon 0.40 GFF5718 Flagellar hook protein FlgE low > 127
Acidovorax sp. GW101-3H11 0.52 Ac3H11_1381 RNA polymerase sigma factor for flagellar operon 0.34 Ac3H11_1374 Flagellar hook protein FlgE low > 79
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS35750 DNA-directed RNA polymerase sigma-70 factor 0.36 RR42_RS35710 flagellar hook protein FlgE low > 128
Dickeya dadantii 3937 0.48 DDA3937_RS13300 RNA polymerase sigma factor FliA 0.36 DDA3937_RS13465 flagellar hook protein FlgE 0.97 10
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_01807 RNA polymerase sigma factor FliA 0.37 OHPLBJKB_02589 Flagellar hook protein FlgE low > 73
Dickeya dianthicola ME23 0.48 DZA65_RS13835 RNA polymerase sigma factor FliA 0.35 DZA65_RS13995 flagellar hook protein FlgE 0.99 5
Escherichia coli ECRC99 0.48 KEDOAH_02310 fliA RNA polymerase sigma factor FliA 0.39 KEDOAH_24095 flgE flagellar hook protein FlgE — —
Escherichia coli ECRC101 0.48 MCAODC_19610 fliA RNA polymerase sigma factor FliA 0.39 MCAODC_23020 flgE flagellar hook protein FlgE 0.52 23
Escherichia coli ECRC100 0.48 OKFHMN_25780 fliA RNA polymerase sigma factor FliA 0.39 OKFHMN_03660 flgE flagellar hook protein FlgE 0.75 26
Escherichia coli ECRC98 0.48 JDDGAC_00370 fliA RNA polymerase sigma factor FliA 0.39 JDDGAC_07320 flgE flagellar hook protein FlgE low > 86
Escherichia coli BW25113 0.48 b1922 fliA flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons (VIMSS) 0.38 b1076 flgE flagellar hook protein E (NCBI) 0.53 1
Escherichia coli ECRC62 0.48 BNILDI_15190 fliA RNA polymerase sigma factor FliA 0.40 BNILDI_19350 flgE flagellar hook protein FlgE low > 75
Escherichia coli Nissle 1917 0.48 ECOLIN_RS10975 RNA polymerase sigma factor FliA 0.39 ECOLIN_RS06230 flagellar hook protein FlgE — —
Escherichia coli ECOR38 0.48 HEPCGN_04135 fliA RNA polymerase sigma factor FliA 0.38 HEPCGN_23830 flgE flagellar hook protein FlgE low > 87
Dickeya dianthicola 67-19 0.48 HGI48_RS13350 RNA polymerase sigma factor FliA 0.34 HGI48_RS13510 flagellar hook protein FlgE 0.82 18
Escherichia fergusonii Becca 0.48 EFB2_02023 RNA polymerase sigma factor FliA 0.38 EFB2_02898 Flagellar hook protein FlgE low > 86
Escherichia coli ECOR27 0.48 NOLOHH_16400 fliA RNA polymerase sigma factor FliA 0.40 NOLOHH_21190 flgE flagellar hook protein FlgE 0.93 8
Escherichia coli ECRC102 0.48 NIAGMN_02270 fliA RNA polymerase sigma factor FliA 0.39 NIAGMN_24170 flgE flagellar hook protein FlgE — —
Erwinia tracheiphila SCR3 0.48 LU632_RS13785 RNA polymerase sigma factor FliA 0.37 LU632_RS10410 flgE flagellar hook protein FlgE low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF1690 RNA polymerase sigma factor for flagellar operon 0.36 GFF3357 Flagellar hook protein FlgE 0.83 7
Pantoea sp. MT58 0.47 IAI47_08160 RNA polymerase sigma factor FliA 0.34 IAI47_12150 flagellar hook protein FlgE 0.88 3
Enterobacter sp. TBS_079 0.46 MPMX20_02847 RNA polymerase sigma factor FliA 0.37 MPMX20_01755 Flagellar hook protein FlgE 0.91 5
Rahnella sp. WP5 0.46 EX31_RS09450 RNA polymerase sigma factor FliA 0.36 EX31_RS11300 flagellar hook protein FlgE 0.86 1
Castellaniella sp019104865 MT123 0.46 ABCV34_RS05605 RNA polymerase sigma factor FliA 0.39 ABCV34_RS05755 flagellar hook protein FlgE 0.82 1
Enterobacter asburiae PDN3 0.46 EX28DRAFT_0625 RNA polymerase sigma factor, FliA/WhiG family 0.36 EX28DRAFT_1856 flagellar hook-basal body protein 0.86 1
Serratia liquefaciens MT49 0.46 IAI46_15785 RNA polymerase sigma factor FliA 0.34 IAI46_15945 flagellar hook protein FlgE low > 86
Pectobacterium carotovorum WPP14 0.45 HER17_RS08355 RNA polymerase sigma factor FliA 0.34 HER17_RS08180 flagellar hook protein FlgE 0.96 2
Pseudomonas syringae pv. syringae B728a 0.41 Psyr_3437 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG 0.35 Psyr_3478 Flagellar basal body rod protein:Protein of unknown function DUF1078:Flagellar basal body FlaE 0.89 4
Pseudomonas syringae pv. syringae B728a ΔmexB 0.41 Psyr_3437 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG 0.35 Psyr_3478 Flagellar basal body rod protein:Protein of unknown function DUF1078:Flagellar basal body FlaE 0.72 6
Pseudomonas stutzeri RCH2 0.41 Psest_1740 RNA polymerase sigma factor, FliA/WhiG family 0.31 Psest_4150 fagellar hook-basal body proteins low > 67
Pseudomonas sp. S08-1 0.41 OH686_02730 RNA polymerase sigma factor for flagellar operon 0.38 OH686_02960 Flagellar hook protein FlgE 0.92 4
Rhodanobacter sp. FW510-T8 0.41 OKGIIK_02830 fliA RNA polymerase sigma factor FliA 0.31 OKGIIK_02665 flgE flagellar hook protein FlgE low > 52
Shewanella amazonensis SB2B 0.40 Sama_2280 fliA flagellar biosynthesis sigma factor (RefSeq) 0.31 Sama_2315 flgE flagellar hook protein FlgE (RefSeq) 0.98 14
Lysobacter sp. OAE881 0.40 ABIE51_RS16865 RNA polymerase sigma factor FliA 0.36 ABIE51_RS16685 flagellar hook protein FlgE 0.95 2
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_18785 flagellar biosynthesis sigma factor 0.39 AO353_02845 flagellar biosynthesis protein FlgE 0.89 2
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_3626 RNA polymerase sigma factor for flagellar operon 0.36 Pf1N1B4_3475 Flagellar hook protein FlgE low > 87
Pseudomonas simiae WCS417 0.40 PS417_19695 flagellar biosynthesis sigma factor 0.34 PS417_21555 flagellar hook protein FlgE 0.97 2
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_4331 RNA polymerase sigma factor for flagellar operon 0.36 PfGW456L13_2004 Flagellar hook protein FlgE 0.36 1
Pseudomonas fluorescens SBW25 0.40 PFLU_RS21660 RNA polymerase sigma factor FliA 0.32 PFLU_RS23165 flagellar hook protein FlgE 0.96 9
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS21660 RNA polymerase sigma factor FliA 0.32 PFLU_RS23165 flagellar hook protein FlgE 0.97 6
Rhodanobacter denitrificans FW104-10B01 0.40 LRK54_RS13580 RNA polymerase sigma factor FliA 0.32 LRK54_RS13420 flagellar hook protein FlgE 0.72 6
Rhodanobacter denitrificans MT42 0.40 LRK55_RS13320 RNA polymerase sigma factor FliA 0.31 LRK55_RS13160 flagellar hook protein FlgE 0.73 2
Pseudomonas putida KT2440 0.40 PP_4341 RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons 0.36 PP_4388 Flagellar hook protein FlgE 0.93 1
Shewanella loihica PV-4 0.39 Shew_1383 fliA flagellar biosynthesis sigma factor (RefSeq) 0.30 Shew_1348 flgE flagellar hook protein FlgE (RefSeq) 0.92 37
Pseudomonas sp. RS175 0.39 PFR28_00852 RNA polymerase sigma factor FliA 0.37 PFR28_03251 Flagellar hook protein FlgE 0.95 4
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_2573 RNA polymerase sigma factor for flagellar operon 0.36 Pf6N2E2_5697 Flagellar hook protein FlgE 0.95 1
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_03730 flagellar biosynthesis sigma factor 0.35 AO356_18930 flagellar biosynthesis protein FlgE 0.95 5
Alteromonas macleodii MIT1002 0.39 MIT1002_01103 Sigma-F factor 0.28 MIT1002_01042 Flagellar hook protein FlgE low > 70
Shewanella oneidensis MR-1 0.39 SO3210 fliA RNA polymerase sigma-27 factor (NCBI ptt file) 0.30 SO3247 flgE flagellar hook protein FlgE (NCBI ptt file) 0.74 23
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS20265 RNA polymerase sigma factor FliA 0.35 ABZR86_RS20090 flagellar hook protein FlgE low > 74
Shewanella sp. ANA-3 0.38 Shewana3_1359 fliA flagellar biosynthesis sigma factor (RefSeq) 0.30 Shewana3_1324 flgE flagellar hook protein FlgE (RefSeq) 0.94 5
Vibrio cholerae E7946 ATCC 55056 0.38 CSW01_10335 RNA polymerase sigma factor FliA 0.28 CSW01_11210 flagellar hook protein FlgE 0.89 4
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.2832.1 RNA polymerase sigma factor for flagellar operon 0.36 Xcc-8004.2781.1 Flagellar hook protein FlgE low > 74
Desulfovibrio vulgaris Hildenborough JW710 0.34 DVU3229 fliA RNA polymerase sigma factor for flagellar operon FliA (TIGR) 0.17 DVU0307 flagella basal body rod domain protein (TIGR) 0.90 8
Sphingomonas koreensis DSMZ 15582 0.26 Ga0059261_2081 RNA polymerase sigma factor, FliA/WhiG family 0.30 Ga0059261_2092 flagellar hook-basal body protein 0.88 2

Not shown: 4 genomes with orthologs for ABZR87_RS18040 only; 11 genomes with orthologs for ABZR87_RS22275 only