Conservation of cofitness between ABZR87_RS18040 and ABZR87_RS22210 in Ralstonia sp. UNC404CL21Col

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia sp. UNC404CL21Col 1.0 ABZR87_RS18040 RNA polymerase sigma factor FliA 1.0 ABZR87_RS22210 flagellar type III secretion system pore protein FliP 0.96 4
Ralstonia solanacearum GMI1000 0.96 RS_RS23830 RNA polymerase sigma factor FliA 0.88 RS_RS18960 flagellar biosynthetic protein FliP low > 80
Ralstonia solanacearum IBSBF1503 0.96 RALBFv3_RS17485 RNA polymerase sigma factor FliA 0.87 RALBFv3_RS21665 flagellar biosynthetic protein FliP low > 76
Ralstonia solanacearum UW163 0.96 UW163_RS21665 RNA polymerase sigma factor FliA 0.87 UW163_RS17520 flagellar biosynthetic protein FliP — —
Ralstonia solanacearum PSI07 0.95 RPSI07_RS06165 RNA polymerase sigma factor FliA 0.88 RPSI07_RS01460 flagellar biosynthetic protein FliP low > 81
Paraburkholderia sabiae LMG 24235 0.59 QEN71_RS28940 RNA polymerase sigma factor FliA 0.60 QEN71_RS28845 flagellar type III secretion system pore protein FliP 0.87 33
Paraburkholderia graminis OAS925 0.59 ABIE53_000108 RNA polymerase sigma factor for flagellar operon FliA 0.60 ABIE53_000084 flagellar biosynthetic protein FliP 0.98 12
Paraburkholderia bryophila 376MFSha3.1 0.59 H281DRAFT_05756 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG 0.60 H281DRAFT_05776 flagellar biosynthetic protein FliP 0.62 17
Burkholderia phytofirmans PsJN 0.58 BPHYT_RS18925 RNA polymerase sigma70 0.61 BPHYT_RS18825 flagellar biosynthesis protein FliP 0.86 18
Herbaspirillum seropedicae SmR1 0.57 HSERO_RS10160 flagellar biosynthesis sigma factor 0.61 HSERO_RS10260 flagellar biosynthesis protein FliP 0.88 19
Dechlorosoma suillum PS 0.57 Dsui_1726 RNA polymerase sigma factor, FliA/WhiG family 0.50 Dsui_1746 flagellar biosynthetic protein FliP 0.75 6
Hydrogenophaga sp. GW460-11-11-14-LB1 0.54 GFF1428 RNA polymerase sigma factor for flagellar operon 0.60 GFF1461 Flagellar biosynthesis protein FliP low > 90
Variovorax sp. SCN45 0.52 GFF5774 RNA polymerase sigma factor for flagellar operon 0.61 GFF5740 Flagellar biosynthesis protein FliP — —
Acidovorax sp. GW101-3H11 0.52 Ac3H11_1381 RNA polymerase sigma factor for flagellar operon 0.62 Ac3H11_1414 Flagellar biosynthesis protein FliP low > 79
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS35750 DNA-directed RNA polymerase sigma-70 factor 0.62 RR42_RS23360 flagellar biosynthesis protein flip low > 128
Dickeya dadantii 3937 0.48 DDA3937_RS13300 RNA polymerase sigma factor FliA 0.63 DDA3937_RS13415 flagellar type III secretion system pore protein FliP 0.97 9
Escherichia coli BW25113 0.48 b1922 fliA flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons (VIMSS) 0.62 b1948 fliP flagellar biosynthesis protein P (NCBI) 0.38 23
Escherichia fergusonii Becca 0.48 EFB2_02023 RNA polymerase sigma factor FliA 0.62 EFB2_01998 Flagellar biosynthetic protein FliP low > 86
Dickeya dianthicola 67-19 0.48 HGI48_RS13350 RNA polymerase sigma factor FliA 0.63 HGI48_RS13460 flagellar type III secretion system pore protein FliP 0.81 20
Escherichia coli ECOR27 0.48 NOLOHH_16400 fliA RNA polymerase sigma factor FliA 0.62 NOLOHH_16295 fliP flagellar type III secretion system pore protein FliP 0.73 70
Escherichia coli ECRC99 0.48 KEDOAH_02310 fliA RNA polymerase sigma factor FliA 0.62 KEDOAH_02430 fliP flagellar type III secretion system pore protein FliP — —
Escherichia coli ECRC102 0.48 NIAGMN_02270 fliA RNA polymerase sigma factor FliA 0.62 NIAGMN_02390 fliP flagellar type III secretion system pore protein FliP — —
Dickeya dianthicola ME23 0.48 DZA65_RS13835 RNA polymerase sigma factor FliA 0.63 DZA65_RS13945 flagellar type III secretion system pore protein FliP 0.98 10
Escherichia coli ECRC101 0.48 MCAODC_19610 fliA RNA polymerase sigma factor FliA 0.62 MCAODC_19730 fliP flagellar type III secretion system pore protein FliP low > 87
Escherichia coli ECRC62 0.48 BNILDI_15190 fliA RNA polymerase sigma factor FliA 0.62 BNILDI_15085 fliP flagellar type III secretion system pore protein FliP low > 75
Escherichia coli ECRC98 0.48 JDDGAC_00370 fliA RNA polymerase sigma factor FliA 0.62 JDDGAC_00250 fliP flagellar type III secretion system pore protein FliP low > 86
Escherichia coli ECOR38 0.48 HEPCGN_04135 fliA RNA polymerase sigma factor FliA 0.62 HEPCGN_04025 fliP flagellar type III secretion system pore protein FliP low > 87
Escherichia coli Nissle 1917 0.48 ECOLIN_RS10975 RNA polymerase sigma factor FliA 0.62 ECOLIN_RS11110 flagellar type III secretion system pore protein FliP — —
Escherichia coli ECRC100 0.48 OKFHMN_25780 fliA RNA polymerase sigma factor FliA 0.62 OKFHMN_25665 fliP flagellar type III secretion system pore protein FliP 0.66 77
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_01807 RNA polymerase sigma factor FliA 0.62 OHPLBJKB_01781 Flagellar biosynthetic protein FliP low > 73
Erwinia tracheiphila SCR3 0.48 LU632_RS13785 RNA polymerase sigma factor FliA 0.59 LU632_RS10525 fliP flagellar type III secretion system pore protein FliP low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF1690 RNA polymerase sigma factor for flagellar operon 0.63 GFF4008 Flagellar biosynthesis protein FliP low > 78
Pantoea sp. MT58 0.47 IAI47_08160 RNA polymerase sigma factor FliA 0.62 IAI47_07980 flagellar type III secretion system pore protein FliP 0.80 26
Enterobacter asburiae PDN3 0.46 EX28DRAFT_0625 RNA polymerase sigma factor, FliA/WhiG family 0.65 EX28DRAFT_0606 flagellar biosynthetic protein FliP low > 76
Serratia liquefaciens MT49 0.46 IAI46_15785 RNA polymerase sigma factor FliA 0.65 IAI46_15890 flagellar type III secretion system pore protein FliP 0.54 12
Castellaniella sp019104865 MT123 0.46 ABCV34_RS05605 RNA polymerase sigma factor FliA 0.60 ABCV34_RS05695 flagellar type III secretion system pore protein FliP 0.64 33
Rahnella sp. WP5 0.46 EX31_RS09450 RNA polymerase sigma factor FliA 0.59 EX31_RS09590 flagellar type III secretion system pore protein FliP low > 89
Enterobacter sp. TBS_079 0.46 MPMX20_02847 RNA polymerase sigma factor FliA 0.65 MPMX20_02945 Flagellar biosynthetic protein FliP 0.91 4
Pectobacterium carotovorum WPP14 0.45 HER17_RS08355 RNA polymerase sigma factor FliA 0.58 HER17_RS08230 flagellar type III secretion system pore protein FliP 0.94 6
Marinobacter adhaerens HP15 0.43 HP15_2302 flagellar biosynthesis sigma factor FliA 0.51 HP15_2312 flagellar biosynthesis protein FliP 0.90 4
Pseudomonas syringae pv. syringae B728a ΔmexB 0.41 Psyr_3437 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG 0.51 Psyr_3444 Flagellar transport protein FliP 0.46 53
Pseudomonas stutzeri RCH2 0.41 Psest_1740 RNA polymerase sigma factor, FliA/WhiG family 0.55 Psest_1732 flagellar biosynthetic protein FliP 0.89 15
Pseudomonas syringae pv. syringae B728a 0.41 Psyr_3437 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG 0.51 Psyr_3444 Flagellar transport protein FliP — —
Pseudomonas sp. S08-1 0.41 OH686_02730 RNA polymerase sigma factor for flagellar operon 0.56 OH686_02770 flagellar biosynthetic protein FliP 0.85 15
Rhodanobacter sp. FW510-T8 0.41 OKGIIK_02830 fliA RNA polymerase sigma factor FliA 0.45 OKGIIK_02795 fliP flagellar type III secretion system pore protein FliP low > 52
Lysobacter sp. OAE881 0.40 ABIE51_RS16865 RNA polymerase sigma factor FliA 0.37 ABIE51_RS16830 flagellar type III secretion system pore protein FliP 0.86 11
Shewanella amazonensis SB2B 0.40 Sama_2280 fliA flagellar biosynthesis sigma factor (RefSeq) 0.52 Sama_2287 fliP flagellar biosynthesis protein FliP (RefSeq) 0.98 19
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_3626 RNA polymerase sigma factor for flagellar operon 0.54 Pf1N1B4_3618 Flagellar biosynthesis protein FliP — —
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_18785 flagellar biosynthesis sigma factor 0.55 AO353_18745 flagellar biosynthesis protein flip 0.47 60
Pseudomonas simiae WCS417 0.40 PS417_19695 flagellar biosynthesis sigma factor 0.54 PS417_19740 flagellar biosynthesis protein flip 0.95 14
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS21660 RNA polymerase sigma factor FliA 0.54 PFLU_RS21710 flagellar type III secretion system pore protein FliP 0.95 19
Pseudomonas fluorescens SBW25 0.40 PFLU_RS21660 RNA polymerase sigma factor FliA 0.54 PFLU_RS21710 flagellar type III secretion system pore protein FliP 0.93 15
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_4331 RNA polymerase sigma factor for flagellar operon 0.55 PfGW456L13_4339 Flagellar biosynthesis protein FliP low > 87
Rhodanobacter denitrificans FW104-10B01 0.40 LRK54_RS13580 RNA polymerase sigma factor FliA 0.50 LRK54_RS13545 flagellar type III secretion system pore protein FliP 0.70 7
Rhodanobacter denitrificans MT42 0.40 LRK55_RS13320 RNA polymerase sigma factor FliA 0.50 LRK55_RS13285 flagellar type III secretion system pore protein FliP low > 63
Pseudomonas putida KT2440 0.40 PP_4341 RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons 0.53 PP_4355 flagellar export apparatus subunit 0.71 32
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_03730 flagellar biosynthesis sigma factor 0.53 AO356_03770 flagellar biosynthesis protein flip 0.86 28
Pseudomonas sp. RS175 0.39 PFR28_00852 RNA polymerase sigma factor FliA 0.54 PFR28_00845 Flagellar biosynthetic protein FliP 0.89 16
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_2573 RNA polymerase sigma factor for flagellar operon 0.53 Pf6N2E2_2580 Flagellar biosynthesis protein FliP 0.86 23
Shewanella loihica PV-4 0.39 Shew_1383 fliA flagellar biosynthesis sigma factor (RefSeq) 0.55 Shew_1376 fliP flagellar biosynthesis protein FliP (RefSeq) 0.96 20
Alteromonas macleodii MIT1002 0.39 MIT1002_01103 Sigma-F factor 0.49 MIT1002_01095 Flagellar biosynthetic protein FliP precursor low > 70
Shewanella oneidensis MR-1 0.39 SO3210 fliA RNA polymerase sigma-27 factor (NCBI ptt file) 0.54 SO3218 fliP flagellar biosynthetic protein FliP (NCBI ptt file) low > 76
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS20265 RNA polymerase sigma factor FliA 0.53 ABZR86_RS20230 flagellar type III secretion system pore protein FliP low > 74
Shewanella sp. ANA-3 0.38 Shewana3_1359 fliA flagellar biosynthesis sigma factor (RefSeq) 0.54 Shewana3_1352 fliP flagellar biosynthesis protein FliP (RefSeq) — —
Desulfovibrio vulgaris Hildenborough JW710 0.34 DVU3229 fliA RNA polymerase sigma factor for flagellar operon FliA (TIGR) 0.35 DVU0044 fliP flagellar biosynthetic protein fliP (TIGR) 0.88 14

Not shown: 4 genomes with orthologs for ABZR87_RS18040 only; 14 genomes with orthologs for ABZR87_RS22210 only