Conservation of cofitness between ABZR87_RS01855 and ABZR87_RS07355 in Ralstonia sp. UNC404CL21Col

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia sp. UNC404CL21Col 1.0 ABZR87_RS01855 A24 family peptidase 1.0 ABZR87_RS07355 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.69 14
Ralstonia solanacearum IBSBF1503 0.86 RALBFv3_RS06190 prepilin peptidase 0.91 RALBFv3_RS11390 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 76
Ralstonia solanacearum UW163 0.86 UW163_RS07435 prepilin peptidase 0.91 UW163_RS02195 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF — —
Ralstonia solanacearum GMI1000 0.83 RS_RS14140 prepilin peptidase 0.92 RS_RS02220 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 80
Ralstonia solanacearum PSI07 0.83 RPSI07_RS11050 prepilin peptidase 0.92 RPSI07_RS21815 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 81
Cupriavidus basilensis FW507-4G11 0.57 RR42_RS17990 methyltransferase 0.84 RR42_RS02310 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 128
Pseudomonas sp. S08-1 0.48 OH686_16495 Leader peptidase (Prepilin peptidase) / N-methyltransferase 0.52 OH686_22700 queuine synthase low > 80
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_1508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.52 PfGW456L13_4015 NADPH dependent preQ0 reductase (EC 1.7.1.13) low > 87
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS27315 A24 family peptidase 0.63 QEN71_RS01975 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 153
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_2840 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.51 Pf1N1B4_65 NADPH dependent preQ0 reductase (EC 1.7.1.13) low > 87
Vibrio cholerae E7946 ATCC 55056 0.46 CSW01_12285 prepilin peptidase 0.53 CSW01_04620 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF — —
Pseudomonas fluorescens SBW25 0.46 PFLU_RS03940 prepilin peptidase 0.52 PFLU_RS07770 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.54 12
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS03940 prepilin peptidase 0.52 PFLU_RS07770 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 109
Pseudomonas putida KT2440 0.45 PP_0632 leader peptidase/N-methyltransferase 0.50 PP_2160 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 96
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_0796 type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A 0.52 Psyr_1907 GTP cyclohydrolase I low > 86
Dechlorosoma suillum PS 0.45 Dsui_1318 prepilin signal peptidase PulO-like peptidase 0.57 Dsui_0505 7-cyano-7-deazaguanine reductase low > 51
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_0796 type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A 0.52 Psyr_1907 GTP cyclohydrolase I — —
Pseudomonas stutzeri RCH2 0.45 Psest_3286 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 0.52 Psest_2714 7-cyano-7-deazaguanine reductase low > 67
Pseudomonas simiae WCS417 0.44 PS417_03895 methyltransferase 0.52 PS417_07695 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 88
Shewanella sp. ANA-3 0.44 Shewana3_0417 type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A (RefSeq) 0.50 Shewana3_2835 queF 7-cyano-7-deazaguanine reductase (RefSeq) low > 73
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF1281 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.59 GFF722 NADPH dependent preQ0 reductase (EC 1.7.1.13) low > 90
Shewanella oneidensis MR-1 0.43 SO0414 pilD type 4 prepilin-like proteins leader peptide processing enzyme (NCBI ptt file) 0.51 SO1608 conserved hypothetical protein (NCBI ptt file) low > 76
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS17155 peptidase A24 0.65 BPHYT_RS03135 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 109
Kangiella aquimarina DSM 16071 0.43 B158DRAFT_2140 type 4 prepilin peptidase 1 (EC:3.4.23.43). Aspartic peptidase. MEROPS family A24A 0.49 B158DRAFT_2159 7-cyano-7-deazaguanine reductase — —
Marinobacter adhaerens HP15 0.43 HP15_2411 type IV pilus prepilin peptidase PilD 0.44 HP15_1463 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 73
Shewanella amazonensis SB2B 0.43 Sama_0367 prepilin peptidase (RefSeq) 0.50 Sama_1120 queF 7-cyano-7-deazaguanine reductase (RefSeq) low > 62
Paraburkholderia graminis OAS925 0.42 ABIE53_003596 leader peptidase (prepilin peptidase)/N-methyltransferase 0.64 ABIE53_000759 7-cyano-7-deazaguanine reductase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_06255 leader peptidase (prepilin peptidase) / N-methyltransferase 0.64 H281DRAFT_01889 7-cyano-7-deazaguanine reductase low > 103
Acidovorax sp. GW101-3H11 0.42 Ac3H11_4764 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.61 Ac3H11_1595 NADPH dependent preQ0 reductase (EC 1.7.1.13) — —
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_14320 methyltransferase 0.52 AO353_00345 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 101
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_16005 methyltransferase 0.52 AO356_02205 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 104
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_5140 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.51 Pf6N2E2_2264 NADPH dependent preQ0 reductase (EC 1.7.1.13) low > 103
Pseudomonas sp. RS175 0.41 PFR28_03733 Type 4 prepilin-like proteins leader peptide-processing enzyme 0.52 PFR28_01136 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 88
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS10050 A24 family peptidase 0.57 ABZR86_RS16195 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 74
Shewanella loihica PV-4 0.40 Shew_3440 prepilin peptidase (RefSeq) 0.54 Shew_2654 queF 7-cyano-7-deazaguanine reductase (RefSeq) low > 60
Dickeya dadantii 3937 0.39 DDA3937_RS14750 prepilin peptidase 0.48 DDA3937_RS04655 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 74
Alteromonas macleodii MIT1002 0.38 MIT1002_03011 Pectic enzymes secretion protein OutO 0.55 MIT1002_00988 NADPH-dependent 7-cyano-7-deazaguanine reductase — —
Variovorax sp. SCN45 0.38 GFF2508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.60 GFF6017 NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13) low > 127
Dickeya dianthicola 67-19 0.38 HGI48_RS14685 prepilin peptidase 0.48 HGI48_RS04615 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 71
Acinetobacter radioresistens SK82 0.38 MPMX26_00244 Type 4 prepilin-like proteins leader peptide-processing enzyme 0.38 MPMX26_02105 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 36
Pectobacterium carotovorum WPP14 0.38 HER17_RS06740 A24 family peptidase 0.49 HER17_RS16390 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 75
Lysobacter sp. OAE881 0.38 ABIE51_RS04805 A24 family peptidase 0.45 ABIE51_RS00515 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 62
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_10830 pulO prepilin peptidase 0.56 OKGIIK_13395 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 52
Variovorax sp. OAS795 0.38 ABID97_RS23440 A24 family peptidase 0.58 ABID97_RS07920 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 91
Dickeya dianthicola ME23 0.37 DZA65_RS15630 prepilin peptidase 0.48 DZA65_RS04535 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 75
Herbaspirillum seropedicae SmR1 0.36 HSERO_RS01760 methyltransferase 0.63 HSERO_RS19515 7-cyano-7-deazaguanine reductase low > 78
Rhodanobacter denitrificans MT42 0.36 LRK55_RS03730 A24 family peptidase 0.54 LRK55_RS10150 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 63
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS03960 A24 family peptidase 0.54 LRK54_RS10510 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 59
Klebsiella michiganensis M5al 0.35 BWI76_RS05035 prepilin peptidase 0.50 BWI76_RS22865 NADPH-dependent 7-cyano-7-deazaguanine reductase — —
Rahnella sp. WP5 0.35 EX31_RS16215 prepilin peptidase 0.51 EX31_RS13085 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 89
Xanthomonas campestris pv. campestris strain 8004 0.34 Xcc-8004.1345.1 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.48 Xcc-8004.4789.1 NADPH dependent preQ0 reductase (EC 1.7.1.13) — —
Enterobacter sp. TBS_079 0.32 MPMX20_01525 Type 4 prepilin-like proteins leader peptide-processing enzyme 0.50 MPMX20_03664 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 85
Escherichia coli ECRC100 0.31 OKFHMN_00235 pulO prepilin peptidase 0.50 OKFHMN_20190 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 80
Escherichia coli ECRC98 0.31 JDDGAC_30345 pulO prepilin peptidase 0.50 JDDGAC_23855 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 86
Escherichia coli ECRC101 0.31 MCAODC_15315 pulO prepilin peptidase 0.50 MCAODC_10715 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 87
Escherichia coli ECRC102 0.31 NIAGMN_28555 pulO prepilin peptidase 0.50 NIAGMN_17960 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF — —
Erwinia tracheiphila SCR3 0.31 LU632_RS25275 A24 family peptidase 0.50 LU632_RS06280 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 74
Enterobacter asburiae PDN3 0.30 EX28DRAFT_2069 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 0.50 EX28DRAFT_2876 7-cyano-7-deazaguanine reductase low > 76
Escherichia coli Nissle 1917 0.27 ECOLIN_RS17100 prepilin peptidase PppA 0.50 ECOLIN_RS15580 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 55
Escherichia coli ECOR38 0.27 HEPCGN_18035 pppA prepilin peptidase PppA 0.50 HEPCGN_19445 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 87
Escherichia coli BL21 0.27 ECD_02841 bifunctional prepilin leader peptidase/ methylase 0.50 ECD_02639 7-cyano-7-deazaguanine reductase (NADPH-dependent) low > 61
Escherichia fergusonii Becca 0.27 EFB2_00842 Prepilin peptidase PppA 0.50 EFB2_01123 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.26 OHPLBJKB_00736 Leader peptidase PppA 0.50 OHPLBJKB_00937 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.50 35
Escherichia coli ECRC62 0.26 BNILDI_00555 pppA prepilin peptidase PppA 0.50 BNILDI_10575 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 75
Escherichia coli BW25113 0.26 b2972 b2972 putative peptidase (VIMSS) 0.50 b2794 yqcD hypothetical protein (NCBI) low > 76

Not shown: 4 genomes with orthologs for ABZR87_RS01855 only; 6 genomes with orthologs for ABZR87_RS07355 only