Conservation of cofitness between ABZR87_RS04880 and ABZR87_RS07055 in Ralstonia sp. UNC404CL21Col

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia sp. UNC404CL21Col 1.0 ABZR87_RS04880 5-formyltetrahydrofolate cyclo-ligase 1.0 ABZR87_RS07055 ribosome-associated translation inhibitor RaiA 0.69 17
Ralstonia solanacearum UW163 0.86 UW163_RS03715 5-formyltetrahydrofolate cyclo-ligase 0.95 UW163_RS02415 ribosomal subunit interface protein — —
Ralstonia solanacearum IBSBF1503 0.86 RALBFv3_RS09865 5-formyltetrahydrofolate cyclo-ligase 0.95 RALBFv3_RS11165 ribosomal subunit interface protein 0.75 4
Ralstonia solanacearum PSI07 0.85 RPSI07_RS23505 5-formyltetrahydrofolate cyclo-ligase 0.94 RPSI07_RS22135 ribosomal subunit interface protein low > 81
Ralstonia solanacearum GMI1000 0.84 RS_RS00450 5-formyltetrahydrofolate cyclo-ligase 0.94 RS_RS02015 ribosomal subunit interface protein low > 80
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS01400 5-formyltetrahydrofolate cyclo-ligase 0.85 RR42_RS02080 ribosome hibernation promoting factor low > 128
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS28640 5-formyltetrahydrofolate cyclo-ligase 0.72 QEN71_RS01750 ribosome-associated translation inhibitor RaiA low > 153
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS18615 5-formyltetrahydrofolate cyclo-ligase 0.70 BPHYT_RS02900 ribosome hibernation promoting factor low > 109
Paraburkholderia graminis OAS925 0.33 ABIE53_000045 5-formyltetrahydrofolate cyclo-ligase 0.69 ABIE53_000717 putative sigma-54 modulation protein low > 113
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_05815 5,10-methenyltetrahydrofolate synthetase 0.70 H281DRAFT_01928 sigma 54 modulation protein /SSU ribosomal protein S30P low > 103
Castellaniella sp019104865 MT123 0.29 ABCV34_RS13555 5-formyltetrahydrofolate cyclo-ligase 0.49 ABCV34_RS14345 ribosome-associated translation inhibitor RaiA — —
Variovorax sp. SCN45 0.28 GFF5164 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.61 GFF7293 Ribosome hibernation promoting factor Hpf low > 127
Variovorax sp. OAS795 0.27 ABID97_RS06600 5-formyltetrahydrofolate cyclo-ligase 0.61 ABID97_RS04490 ribosome-associated translation inhibitor RaiA low > 91
Dechlorosoma suillum PS 0.25 Dsui_0682 5,10-methenyltetrahydrofolate synthetase 0.50 Dsui_0703 ribosomal subunit interface protein — —
Rhodanobacter sp. FW510-T8 0.22 OKGIIK_12225 5-formyltetrahydrofolate cyclo-ligase 0.30 OKGIIK_02260 raiA ribosomal subunit interface protein low > 52
Rhodanobacter denitrificans MT42 0.22 LRK55_RS11395 5-formyltetrahydrofolate cyclo-ligase 0.30 LRK55_RS12570 ribosome-associated translation inhibitor RaiA low > 63
Rhodanobacter denitrificans FW104-10B01 0.21 LRK54_RS11670 5-formyltetrahydrofolate cyclo-ligase 0.30 LRK54_RS12870 ribosome-associated translation inhibitor RaiA low > 59
Dyella japonica UNC79MFTsu3.2 0.19 ABZR86_RS11995 5-formyltetrahydrofolate cyclo-ligase 0.26 ABZR86_RS19810 ribosome-associated translation inhibitor RaiA low > 74
Lysobacter sp. OAE881 0.19 ABIE51_RS17355 5-formyltetrahydrofolate cyclo-ligase 0.31 ABIE51_RS15960 ribosome-associated translation inhibitor RaiA low > 62
Shewanella sp. ANA-3 0.18 Shewana3_3506 5-formyltetrahydrofolate cyclo-ligase (RefSeq) 0.42 Shewana3_0671 sigma 54 modulation protein / SSU ribosomal protein S30P (RefSeq) low > 73
Shewanella loihica PV-4 0.18 Shew_3069 5-formyltetrahydrofolate cyclo-ligase (RefSeq) 0.42 Shew_3312 sigma 54 modulation protein/ribosomal protein S30EA (RefSeq) low > 60
Pseudomonas fluorescens FW300-N2E3 0.17 AO353_08780 5-formyltetrahydrofolate cyclo-ligase 0.35 AO353_05185 hypothetical protein low > 101
Xanthomonas campestris pv. campestris strain 8004 0.17 Xcc-8004.1138.1 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.32 Xcc-8004.1661.1 Ribosome hibernation protein YhbH low > 74
Pseudomonas fluorescens FW300-N2E2 0.17 Pf6N2E2_4476 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.37 Pf6N2E2_3268 Ribosome hibernation protein YhbH low > 103
Kangiella aquimarina DSM 16071 0.16 B158DRAFT_0528 5-formyltetrahydrofolate cyclo-ligase 0.41 B158DRAFT_2079 ribosomal subunit interface protein low > 40
Pectobacterium carotovorum WPP14 0.16 HER17_RS19095 5-formyltetrahydrofolate cyclo-ligase 0.34 HER17_RS20065 ribosome hibernation promoting factor low > 75
Pseudomonas fluorescens SBW25-INTG 0.16 PFLU_RS28965 5-formyltetrahydrofolate cyclo-ligase 0.37 PFLU_RS04395 ribosome-associated translation inhibitor RaiA low > 109
Pseudomonas fluorescens SBW25 0.16 PFLU_RS28965 5-formyltetrahydrofolate cyclo-ligase 0.37 PFLU_RS04395 ribosome-associated translation inhibitor RaiA low > 109
Dickeya dadantii 3937 0.16 DDA3937_RS02410 5-formyltetrahydrofolate cyclo-ligase 0.31 DDA3937_RS01525 ribosome hibernation promoting factor low > 74
Pseudomonas fluorescens FW300-N2C3 0.16 AO356_12990 5-formyltetrahydrofolate cyclo-ligase 0.37 AO356_07040 hypothetical protein low > 104
Pseudomonas stutzeri RCH2 0.16 Psest_0170 5,10-methenyltetrahydrofolate synthetase 0.42 Psest_3314 ribosomal subunit interface protein low > 67
Pseudomonas simiae WCS417 0.16 PS417_27305 5-formyltetrahydrofolate cyclo-ligase 0.40 PS417_04340 ribosome hibernation promoting factor HPF low > 88
Pseudomonas fluorescens FW300-N1B4 0.16 Pf1N1B4_2225 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.37 Pf1N1B4_1081 Ribosome hibernation protein YhbH low > 87
Erwinia tracheiphila SCR3 0.16 LU632_RS05860 5-formyltetrahydrofolate cyclo-ligase 0.28 LU632_RS21285 hpf ribosome hibernation promoting factor — —
Vibrio cholerae E7946 ATCC 55056 0.16 CSW01_12545 5-formyltetrahydrofolate cyclo-ligase 0.31 CSW01_12820 ribosome hibernation promoting factor low > 62
Pseudomonas fluorescens GW456-L13 0.15 PfGW456L13_892 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.38 PfGW456L13_5015 Ribosome hibernation protein YhbH low > 87
Rahnella sp. WP5 0.15 EX31_RS21480 5-formyltetrahydrofolate cyclo-ligase 0.35 EX31_RS12395 ribosome hibernation promoting factor low > 89
Pantoea sp. MT58 0.15 IAI47_03730 5-formyltetrahydrofolate cyclo-ligase 0.32 IAI47_17190 ribosome hibernation promoting factor low > 76
Pseudomonas syringae pv. syringae B728a 0.15 Psyr_0317 5-formyltetrahydrofolate cyclo-ligase 0.39 Psyr_4148 sigma 54 modulation protein / SSU ribosomal protein S30P low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.15 Psyr_0317 5-formyltetrahydrofolate cyclo-ligase 0.39 Psyr_4148 sigma 54 modulation protein / SSU ribosomal protein S30P low > 86
Pseudomonas sp. S08-1 0.15 OH686_11225 5-formyltetrahydrofolate cyclo-ligase 0.41 OH686_08550 Ribosome hibernation promoting factor Hpf low > 80
Parabacteroides merdae CL09T00C40 0.15 HMPREF1078_RS14635 5-formyltetrahydrofolate cyclo-ligase 0.24 HMPREF1078_RS10880 ribosome-associated translation inhibitor RaiA low > 61
Pseudomonas putida KT2440 0.15 PP_5203 5-formyltetrahydrofolate cyclo-ligase 0.35 PP_0951 Ribosome hibernation promoting factor low > 96
Shewanella oneidensis MR-1 0.15 SO0774 5-formyltetrahydrofolate cyclo-ligase family protein (NCBI ptt file) 0.42 SO3962 yfiA-3 ribosomal subunit interface protein (NCBI ptt file) low > 76
Serratia liquefaciens MT49 0.15 IAI46_20895 5-formyltetrahydrofolate cyclo-ligase 0.35 IAI46_22475 ribosome hibernation promoting factor low > 86
Pseudomonas sp. RS175 0.14 PFR28_04325 5-formyltetrahydrofolate cyclo-ligase 0.38 PFR28_00172 Ribosome hibernation promoting factor low > 88
Enterobacter asburiae PDN3 0.14 EX28DRAFT_2964 5,10-methenyltetrahydrofolate synthetase 0.27 EX28DRAFT_3257 ribosomal subunit interface protein low > 76
Escherichia coli ECRC99 0.14 KEDOAH_08655 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.30 KEDOAH_10215 Ribosome hibernation promoting factor — —
Enterobacter sp. TBS_079 0.14 MPMX20_03770 5-formyltetrahydrofolate cyclo-ligase 0.28 MPMX20_04109 Ribosome hibernation promoting factor low > 85
Escherichia coli ECRC98 0.14 JDDGAC_23125 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.30 JDDGAC_21560 Ribosome hibernation promoting factor 0.91 3
Escherichia coli ECRC101 0.14 MCAODC_10005 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.30 MCAODC_08455 Ribosome hibernation promoting factor low > 87
Escherichia coli ECRC62 0.14 BNILDI_09930 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.30 BNILDI_01800 Ribosome hibernation promoting factor low > 75
Escherichia fergusonii Becca 0.14 EFB2_00991 5-formyltetrahydrofolate cyclo-ligase 0.30 EFB2_00620 Ribosome hibernation promoting factor low > 86
Escherichia coli ECRC102 0.14 NIAGMN_17250 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.30 NIAGMN_15695 Ribosome hibernation promoting factor — —
Escherichia coli ECRC100 0.14 OKFHMN_19485 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.30 OKFHMN_17935 Ribosome hibernation promoting factor low > 80
Escherichia coli ECOR27 0.14 NOLOHH_11395 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.30 NOLOHH_09735 Ribosome hibernation promoting factor low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.14 GFF3012 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.30 GFF2947 Ribosome hibernation protein YhbH low > 78
Klebsiella michiganensis M5al 0.13 BWI76_RS23915 5-formyltetrahydrofolate cyclo-ligase 0.33 BWI76_RS25270 ribosome hibernation promoting factor low > 92
Escherichia coli ECOR38 0.13 HEPCGN_18775 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.30 HEPCGN_16810 Ribosome hibernation promoting factor 0.76 3
Marinobacter adhaerens HP15 0.13 HP15_3211 5-formyltetrahydrofolate cyclo-ligase 0.39 HP15_2443 sigma 54 modulation protein/ribosomal protein S30EA low > 73
Escherichia coli Nissle 1917 0.13 ECOLIN_RS16205 5-formyltetrahydrofolate cyclo-ligase 0.30 ECOLIN_RS18430 ribosome hibernation promoting factor low > 55

Not shown: 19 genomes with orthologs for ABZR87_RS04880 only; 10 genomes with orthologs for ABZR87_RS07055 only