| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Ralstonia sp. UNC404CL21Col | 1.0 | ABZR87_RS05310 | | efflux RND transporter periplasmic adaptor subunit | 1.0 | ABZR87_RS04885 | | lytic transglycosylase domain-containing protein | 0.68 | 7 |
| Ralstonia solanacearum PSI07 | 0.76 | RPSI07_RS23900 | | efflux RND transporter periplasmic adaptor subunit | 0.91 | RPSI07_RS23510 | | lytic transglycosylase | low | > 81 |
| Ralstonia solanacearum IBSBF1503 | 0.75 | RALBFv3_RS09450 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | 0.91 | RALBFv3_RS09860 | | lytic transglycosylase | low | > 76 |
| Ralstonia solanacearum UW163 | 0.75 | UW163_RS04130 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | 0.91 | UW163_RS03720 | | lytic transglycosylase | — | — |
| Ralstonia solanacearum GMI1000 | 0.73 | RS_RS00050 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | 0.91 | RS_RS00445 | | lytic transglycosylase | low | > 80 |
| Herbaspirillum seropedicae SmR1 | 0.53 | HSERO_RS02415 | | hemolysin D | 0.47 | HSERO_RS21415 | | lytic transglycosylase | low | > 78 |
| Cupriavidus basilensis FW507-4G11 | 0.47 | RR42_RS20645 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | 0.69 | RR42_RS01405 | | lytic transglycosylase | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.47 | GFF3839 | | RND efflux system, membrane fusion protein CmeA | 0.31 | GFF1614 | | Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) | low | > 90 |
| Variovorax sp. OAS795 | 0.47 | ABID97_RS00320 | | efflux RND transporter periplasmic adaptor subunit | 0.31 | ABID97_RS06595 | | transglycosylase SLT domain-containing protein | low | > 91 |
| Variovorax sp. SCN45 | 0.47 | GFF3726 | | RND efflux system, membrane fusion protein | 0.31 | GFF5163 | | Soluble lytic murein transglycosylase (EC 4.2.2.n1) | low | > 127 |
| Klebsiella michiganensis M5al | 0.45 | BWI76_RS06780 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | 0.12 | BWI76_RS04185 | | murein transglycosylase | low | > 92 |
| Paraburkholderia sabiae LMG 24235 | 0.45 | QEN71_RS29870 | | efflux RND transporter periplasmic adaptor subunit | 0.52 | QEN71_RS28635 | | lytic transglycosylase domain-containing protein | low | > 153 |
| Acidovorax sp. GW101-3H11 | 0.44 | Ac3H11_4449 | | RND efflux system, membrane fusion protein CmeA | 0.33 | Ac3H11_1834 | | Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) | 0.36 | 9 |
| Escherichia coli ECOR38 | 0.44 | HEPCGN_06815 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.12 | HEPCGN_09175 | sltY | murein transglycosylase | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.44 | OHPLBJKB_03211 | | Multidrug efflux pump subunit AcrA | 0.12 | OHPLBJKB_03669 | | Soluble lytic murein transglycosylase | low | > 73 |
| Escherichia coli Nissle 1917 | 0.44 | ECOLIN_RS02755 | | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.12 | ECOLIN_RS25210 | | murein transglycosylase | — | — |
| Escherichia coli ECRC62 | 0.44 | BNILDI_22550 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.12 | BNILDI_08095 | sltY | murein transglycosylase | low | > 75 |
| Escherichia coli ECRC99 | 0.44 | KEDOAH_19765 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.12 | KEDOAH_16985 | sltY | murein transglycosylase | — | — |
| Escherichia fergusonii Becca | 0.44 | EFB2_03595 | | Multidrug efflux pump subunit AcrA | 0.12 | EFB2_04052 | | Soluble lytic murein transglycosylase | low | > 86 |
| Escherichia coli ECRC100 | 0.44 | OKFHMN_08200 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.12 | OKFHMN_11170 | sltY | murein transglycosylase | low | > 80 |
| Escherichia coli ECRC102 | 0.44 | NIAGMN_06255 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.12 | NIAGMN_09020 | sltY | murein transglycosylase | — | — |
| Escherichia coli ECRC101 | 0.44 | MCAODC_27425 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.12 | MCAODC_01685 | sltY | murein transglycosylase | low | > 87 |
| Escherichia coli ECOR27 | 0.44 | NOLOHH_01135 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.12 | NOLOHH_03500 | sltY | murein transglycosylase | low | > 75 |
| Escherichia coli ECRC98 | 0.44 | JDDGAC_11850 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.12 | JDDGAC_14765 | sltY | murein transglycosylase | low | > 86 |
| Escherichia coli BW25113 | 0.44 | b0463 | acrA | multidrug efflux system (NCBI) | 0.12 | b4392 | slt | soluble lytic murein transglycosylase (VIMSS) | low | > 76 |
| Escherichia coli BL21 | 0.44 | ECD_00414 | | multidrug efflux system | 0.11 | ECD_04268 | | lytic murein transglycosylase, soluble | low | > 61 |
| Enterobacter sp. TBS_079 | 0.44 | MPMX20_01065 | | Multidrug efflux pump subunit AcrA | 0.12 | MPMX20_00699 | | Soluble lytic murein transglycosylase | low | > 85 |
| Pantoea sp. MT58 | 0.43 | IAI47_14510 | | efflux RND transporter periplasmic adaptor subunit | 0.13 | IAI47_16260 | | murein transglycosylase | low | > 76 |
| Dickeya dadantii 3937 | 0.43 | DDA3937_RS05740 | | efflux RND transporter periplasmic adaptor subunit | 0.12 | DDA3937_RS18455 | | murein transglycosylase | low | > 74 |
| Serratia liquefaciens MT49 | 0.43 | IAI46_05190 | | multidrug efflux RND transporter periplasmic adaptor subunit SdeX | 0.12 | IAI46_02985 | | murein transglycosylase | low | > 86 |
| Erwinia tracheiphila SCR3 | 0.43 | LU632_RS18180 | | efflux RND transporter periplasmic adaptor subunit | 0.12 | LU632_RS02575 | sltY | murein transglycosylase | — | — |
| Rahnella sp. WP5 | 0.43 | EX31_RS22475 | | efflux RND transporter periplasmic adaptor subunit | 0.12 | EX31_RS03985 | | murein transglycosylase | low | > 89 |
| Dickeya dianthicola ME23 | 0.43 | DZA65_RS06120 | | efflux RND transporter periplasmic adaptor subunit | 0.11 | DZA65_RS19525 | | murein transglycosylase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.43 | HGI48_RS05795 | | efflux RND transporter periplasmic adaptor subunit | 0.12 | HGI48_RS18385 | | murein transglycosylase | low | > 71 |
| Pseudomonas simiae WCS417 | 0.42 | PS417_12590 | | RND transporter | 0.16 | PS417_07550 | | lytic transglycosylase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.42 | GFF2117 | | RND efflux system, membrane fusion protein CmeA | 0.12 | GFF1060 | | Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) | low | > 78 |
| Pseudomonas fluorescens SBW25-INTG | 0.42 | PFLU_RS13285 | | efflux RND transporter periplasmic adaptor subunit | 0.16 | PFLU_RS07630 | | transglycosylase SLT domain-containing protein | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.42 | PFLU_RS13285 | | efflux RND transporter periplasmic adaptor subunit | 0.16 | PFLU_RS07630 | | transglycosylase SLT domain-containing protein | low | > 109 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.42 | Xcc-8004.1793.1 | | RND efflux system, membrane fusion protein CmeA | 0.15 | Xcc-8004.961.1 | | Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) | low | > 74 |
| Burkholderia phytofirmans PsJN | 0.42 | BPHYT_RS16175 | | hemolysin D | 0.52 | BPHYT_RS18610 | | lytic transglycosylase | low | > 109 |
| Enterobacter asburiae PDN3 | 0.42 | EX28DRAFT_2495 | | RND family efflux transporter, MFP subunit | 0.13 | EX28DRAFT_3602 | | Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.42 | HER17_RS15735 | | efflux RND transporter periplasmic adaptor subunit | 0.12 | HER17_RS02750 | | murein transglycosylase | low | > 75 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.41 | H281DRAFT_04171 | | membrane fusion protein, multidrug efflux system | 0.50 | H281DRAFT_05816 | | soluble lytic murein transglycosylase | 0.36 | 54 |
| Pseudomonas fluorescens GW456-L13 | 0.41 | PfGW456L13_2955 | | RND efflux system, membrane fusion protein CmeA | 0.17 | PfGW456L13_4045 | | Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) | low | > 87 |
| Paraburkholderia graminis OAS925 | 0.41 | ABIE53_003409 | | membrane fusion protein (multidrug efflux system) | 0.51 | ABIE53_000044 | | soluble lytic murein transglycosylase | 0.16 | 106 |
| Dyella japonica UNC79MFTsu3.2 | 0.40 | ABZR86_RS18280 | | efflux RND transporter periplasmic adaptor subunit | 0.15 | ABZR86_RS12745 | | transglycosylase SLT domain-containing protein | low | > 74 |
| Pseudomonas fluorescens FW300-N2C3 | 0.40 | AO356_28725 | | RND transporter | 0.17 | AO356_02350 | | lytic transglycosylase | — | — |
| Pseudomonas sp. RS175 | 0.40 | PFR28_02462 | | Multidrug resistance protein MexA | 0.17 | PFR28_01106 | | Soluble lytic murein transglycosylase | low | > 88 |
| Pseudomonas putida KT2440 | 0.40 | PP_1386 | | Probable efflux pump periplasmic linker TtgA | 0.16 | PP_2130 | | putative Soluble lytic transglycosylase | 0.30 | 22 |
| Pseudomonas fluorescens FW300-N2E2 | 0.40 | Pf6N2E2_1660 | | RND efflux system, membrane fusion protein CmeA | 0.16 | Pf6N2E2_2294 | | Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) | low | > 103 |
| Pseudomonas fluorescens FW300-N2E3 | 0.40 | AO353_26840 | | RND transporter | 0.17 | AO353_00530 | | lytic transglycosylase | low | > 101 |
| Pseudomonas sp. S08-1 | 0.39 | OH686_16045 | | Multidrug efflux system, membrane fusion component | 0.16 | OH686_21900 | | Soluble lytic murein transglycosylase | low | > 80 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.39 | Psyr_4007 | | Secretion protein HlyD | 0.16 | Psyr_3295 | | SLT | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.39 | Psyr_4007 | | Secretion protein HlyD | 0.16 | Psyr_3295 | | SLT | low | > 86 |
| Rhodanobacter sp. FW510-T8 | 0.39 | OKGIIK_09165 | acrA | efflux transporter periplasmic adaptor subunit | 0.15 | OKGIIK_16395 | | Lytic transglycosylase | low | > 52 |
| Pseudomonas fluorescens FW300-N1B4 | 0.39 | Pf1N1B4_4773 | | RND efflux system, membrane fusion protein CmeA | 0.16 | Pf1N1B4_3898 | | Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) | — | — |
| Pseudomonas stutzeri RCH2 | 0.38 | Psest_0309 | | RND family efflux transporter, MFP subunit | 0.15 | Psest_1844 | | Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) | low | > 67 |
| Shewanella amazonensis SB2B | 0.38 | Sama_3553 | | multidrug resistance protein AcrA/AcrE family (RefSeq) | 0.10 | Sama_1895 | | soluble lytic murein transglycosylase, putative (RefSeq) | low | > 62 |
| Rhodanobacter denitrificans FW104-10B01 | 0.38 | LRK54_RS02095 | | efflux RND transporter periplasmic adaptor subunit | 0.15 | LRK54_RS07245 | | transglycosylase SLT domain-containing protein | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.38 | LRK55_RS01870 | | efflux RND transporter periplasmic adaptor subunit | 0.15 | LRK55_RS06980 | | transglycosylase SLT domain-containing protein | low | > 63 |
| Shewanella sp. ANA-3 | 0.38 | Shewana3_4046 | | RND family efflux transporter MFP subunit (RefSeq) | 0.12 | Shewana3_2236 | | lytic transglycosylase, catalytic (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.38 | SO4693 | | multidrug resistance protein, AcrA/AcrE family (NCBI ptt file) | 0.12 | SO2040 | | soluble lytic murein transglycosylase, putative (NCBI ptt file) | low | > 76 |
| Acinetobacter radioresistens SK82 | 0.37 | MPMX26_00690 | | Multidrug efflux pump subunit AcrA | 0.18 | MPMX26_02666 | | Soluble lytic murein transglycosylase | low | > 36 |
| Shewanella loihica PV-4 | 0.34 | Shew_0031 | | RND family efflux transporter MFP subunit (RefSeq) | 0.11 | Shew_2125 | | lytic transglycosylase, catalytic (RefSeq) | low | > 60 |
| Dechlorosoma suillum PS | 0.34 | Dsui_3181 | | RND family efflux transporter, MFP subunit | 0.35 | Dsui_0683 | | soluble lytic murein transglycosylase-like protein | low | > 51 |
| Castellaniella sp019104865 MT123 | 0.33 | ABCV34_RS04230 | | efflux RND transporter periplasmic adaptor subunit | 0.30 | ABCV34_RS13560 | | transglycosylase SLT domain-containing protein | low | > 48 |
| Lysobacter sp. OAE881 | 0.33 | ABIE51_RS17985 | | efflux RND transporter periplasmic adaptor subunit | 0.14 | ABIE51_RS19070 | | transglycosylase SLT domain-containing protein | 0.43 | 36 |
| Alteromonas macleodii MIT1002 | 0.32 | MIT1002_00134 | | Acriflavine resistance protein A precursor | 0.11 | MIT1002_00576 | | Soluble lytic murein transglycosylase precursor | low | > 70 |
| Kangiella aquimarina DSM 16071 | 0.31 | B158DRAFT_0734 | | RND family efflux transporter, MFP subunit | 0.11 | B158DRAFT_1444 | | Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) | low | > 40 |
Not shown: 20 genomes with orthologs for ABZR87_RS05310 only; 1 genomes with orthologs for ABZR87_RS04885 only