Conservation of cofitness between Sama_2218 and Sama_3296 in Shewanella amazonensis SB2B

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_2218 maleylacetoacetate isomerase (RefSeq) 1.0 Sama_3296 aconitate hydratase (RefSeq) 0.42 5
Shewanella sp. ANA-3 0.68 Shewana3_2777 maleylacetoacetate isomerase (RefSeq) 0.83 Shewana3_3827 aconitate hydratase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.68 SO1671 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) 0.83 SO0343 acnA aconitate hydratase 1 (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.64 Shew_1439 maleylacetoacetate isomerase (RefSeq) 0.84 Shew_1822 aconitate hydratase (RefSeq) low > 60
Acinetobacter radioresistens SK82 0.57 MPMX26_02378 Maleylpyruvate isomerase 0.79 MPMX26_02481 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) low > 36
Rhodanobacter denitrificans FW104-10B01 0.56 LRK54_RS05735 maleylacetoacetate isomerase 0.36 LRK54_RS00785 aconitate hydratase AcnA — —
Rhodanobacter denitrificans MT42 0.56 LRK55_RS05490 maleylacetoacetate isomerase 0.36 LRK55_RS00560 aconitate hydratase AcnA — —
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS18680 maleylacetoacetate isomerase 0.81 ABZR86_RS08435 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.33 69
Pseudomonas stutzeri RCH2 0.54 Psest_3511 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) 0.80 Psest_2319 aconitate hydratase 1/2-methylisocitrate dehydratase, Fe/S-dependent — —
Paraburkholderia sabiae LMG 24235 0.54 QEN71_RS01655 maleylacetoacetate isomerase 0.82 QEN71_RS31060 Fe/S-dependent 2-methylisocitrate dehydratase AcnD low > 153
Kangiella aquimarina DSM 16071 0.54 B158DRAFT_1449 maleylacetoacetate isomerase 0.84 B158DRAFT_1345 aconitate hydratase 1/2-methylisocitrate dehydratase, Fe/S-dependent — —
Rhodanobacter sp. FW510-T8 0.54 OKGIIK_01115 maiA maleylacetoacetate isomerase 0.37 OKGIIK_06455 acnA aconitate hydratase AcnA — —
Lysobacter sp. OAE881 0.54 ABIE51_RS04250 maleylacetoacetate isomerase 0.81 ABIE51_RS09495 Fe/S-dependent 2-methylisocitrate dehydratase AcnD — —
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS01970 maleylacetoacetate isomerase 0.82 RR42_RS11270 aconitate hydratase low > 128
Castellaniella sp019104865 MT123 0.52 ABCV34_RS13685 maleylacetoacetate isomerase 0.40 ABCV34_RS13800 aconitate hydratase AcnA low > 48
Paraburkholderia bryophila 376MFSha3.1 0.52 H281DRAFT_01970 maleylacetoacetate isomerase (EC 5.2.1.2) 0.81 H281DRAFT_02981 aconitase /2-methylcitrate dehydratase (trans-methylaconitate-forming) low > 103
Pseudomonas sp. S08-1 0.52 OH686_21095 maleylacetoacetate isomerase 0.81 OH686_01680 2-methylisocitrate dehydratase, Fe/S-dependent low > 80
Alteromonas macleodii MIT1002 0.52 MIT1002_01149 Maleylpyruvate isomerase 0.85 MIT1002_03131 Aconitate hydratase 1 — —
Paraburkholderia graminis OAS925 0.52 ABIE53_000699 maleylpyruvate isomerase 0.82 ABIE53_005043 iron-sulfur-dependent 2-methylisocitrate dehydratase low > 113
Vibrio cholerae E7946 ATCC 55056 0.52 CSW01_06790 maleylacetoacetate isomerase 0.78 CSW01_06745 Fe/S-dependent 2-methylisocitrate dehydratase AcnD low > 62
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS02805 maleylacetoacetate isomerase 0.82 BPHYT_RS30145 aconitate hydratase low > 109
Ralstonia sp. UNC404CL21Col 0.50 ABZR87_RS06920 maleylacetoacetate isomerase 0.82 ABZR87_RS16735 Fe/S-dependent 2-methylisocitrate dehydratase AcnD low > 80
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS05615 maleylacetoacetate isomerase 0.82 HSERO_RS11425 aconitate hydratase — —
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS11050 maleylacetoacetate isomerase 0.80 RALBFv3_RS22830 Fe/S-dependent 2-methylisocitrate dehydratase AcnD low > 76
Ralstonia solanacearum UW163 0.49 UW163_RS02530 maleylacetoacetate isomerase 0.80 UW163_RS23450 Fe/S-dependent 2-methylisocitrate dehydratase AcnD — —
Ralstonia solanacearum PSI07 0.49 RPSI07_RS22255 maleylacetoacetate isomerase 0.81 RPSI07_RS00390 Fe/S-dependent 2-methylisocitrate dehydratase AcnD low > 81
Sphingomonas koreensis DSMZ 15582 0.49 Ga0059261_0507 maleylacetoacetate isomerase 0.38 Ga0059261_3296 aconitate hydratase 1 — —
Ralstonia solanacearum GMI1000 0.48 RS_RS01895 maleylacetoacetate isomerase 0.81 RS_RS17730 Fe/S-dependent 2-methylisocitrate dehydratase AcnD low > 80
Variovorax sp. SCN45 0.47 GFF806 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) 0.81 GFF270 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) (EC 4.2.1.117) low > 127
Brevundimonas sp. GW460-12-10-14-LB2 0.47 A4249_RS12095 maleylacetoacetate isomerase 0.39 A4249_RS12770 aconitate hydratase AcnA — —
Azospirillum sp. SherDot2 0.46 MPMX19_02062 Maleylpyruvate isomerase 0.41 MPMX19_02045 Aconitate hydratase A low > 112
Variovorax sp. OAS795 0.46 ABID97_RS12400 maleylacetoacetate isomerase 0.37 ABID97_RS08550 aconitate hydratase AcnA low > 91
Acidovorax sp. GW101-3H11 0.45 Ac3H11_2306 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) 0.78 Ac3H11_2323 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) — —
Escherichia coli ECRC99 0.44 KEDOAH_04580 maiA maleylacetoacetate isomerase 0.41 KEDOAH_26190 acnA aconitate hydratase AcnA — —
Escherichia coli ECRC98 0.44 JDDGAC_27560 maiA maleylacetoacetate isomerase 0.41 JDDGAC_05120 acnA aconitate hydratase AcnA low > 86
Escherichia coli ECRC101 0.44 MCAODC_14655 maiA maleylacetoacetate isomerase 0.40 MCAODC_15690 acnA aconitate hydratase AcnA low > 87
Escherichia coli ECRC102 0.44 NIAGMN_21370 maiA maleylacetoacetate isomerase 0.41 NIAGMN_26745 acnA aconitate hydratase AcnA — —
Escherichia coli ECRC100 0.44 OKFHMN_23605 maiA maleylacetoacetate isomerase 0.41 OKFHMN_02575 acnA aconitate hydratase AcnA low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF3802 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) 0.41 GFF2709 Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) low > 78
Escherichia coli ECRC62 0.44 BNILDI_14095 maiA maleylacetoacetate isomerase 0.41 BNILDI_18390 acnA aconitate hydratase AcnA low > 75
Klebsiella michiganensis M5al 0.44 BWI76_RS19575 maleylacetoacetate isomerase 0.40 BWI76_RS11940 aconitate hydratase 1 low > 92
Xanthomonas campestris pv. campestris strain 8004 0.43 Xcc-8004.4525.1 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) 0.83 Xcc-8004.3979.1 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) low > 74
Pseudomonas putida KT2440 0.42 PP_4619 Maleylacetoacetate isomerase 0.83 PP_2336 aconitate hydratase 1 0.15 84
Rhodopseudomonas palustris CGA009 0.41 TX73_024280 maleylacetoacetate isomerase 0.40 TX73_001045 aconitate hydratase AcnA — —
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_5292 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) 0.83 Pf6N2E2_6063 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) low > 103
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_4960 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) 0.83 PfGW456L13_4116 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) low > 87
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_1023 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) 0.83 Pf1N1B4_3821 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) 0.25 47
Caulobacter crescentus NA1000 Δfur 0.39 CCNA_03683 maleylpyruvate isomerase 0.38 CCNA_03781 aconitate hydratase — —
Caulobacter crescentus NA1000 0.39 CCNA_03683 maleylpyruvate isomerase 0.38 CCNA_03781 aconitate hydratase — —
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_16835 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) 0.83 AO356_20875 Fe/S-dependent 2-methylisocitrate dehydratase AcnD low > 104
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_15560 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) 0.84 AO353_00890 Fe/S-dependent 2-methylisocitrate dehydratase AcnD low > 101
Pseudomonas sp. RS175 0.39 PFR28_00223 Maleylpyruvate isomerase 0.83 PFR28_02925 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) low > 88
Pseudomonas fluorescens SBW25 0.38 PFLU_RS05095 maleylacetoacetate isomerase 0.83 PFLU_RS22680 Fe/S-dependent 2-methylisocitrate dehydratase AcnD low > 109
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS05095 maleylacetoacetate isomerase 0.83 PFLU_RS22680 Fe/S-dependent 2-methylisocitrate dehydratase AcnD low > 109
Pseudomonas simiae WCS417 0.38 PS417_05025 maleylacetoacetate isomerase 0.83 PS417_21070 aconitate hydratase low > 88
Phaeobacter inhibens DSM 17395 0.38 PGA1_c00380 putative maleylacetoacetate isomerase 0.39 PGA1_c18830 aconitate hydratase AcnA — —
Sinorhizobium meliloti 1021 0.37 SMc03206 maleylacetoacetate isomerase (glutathione transferase zeta 1) protein 0.38 SMc03846 aconitate hydratase — —

Not shown: 1 genomes with orthologs for Sama_2218 only; 37 genomes with orthologs for Sama_3296 only