Conservation of cofitness between Sama_0857 and Sama_2627 in Shewanella amazonensis SB2B

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_0857 gltB glutamate synthase subunit alpha (RefSeq) 1.0 Sama_2627 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase (RefSeq) 0.84 16
Shewanella oneidensis MR-1 0.89 SO1325 gltB glutamate synthase, large subunit (NCBI ptt file) 0.75 SO0818 metE 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (NCBI ptt file) 0.85 36
Shewanella sp. ANA-3 0.89 Shewana3_3050 gltB glutamate synthase subunit alpha (RefSeq) 0.75 Shewana3_3469 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase (RefSeq) low > 73
Shewanella loihica PV-4 0.85 Shew_1032 gltB glutamate synthase subunit alpha (RefSeq) 0.70 Shew_2986 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase (RefSeq) low > 60
Serratia liquefaciens MT49 0.67 IAI46_22345 glutamate synthase large subunit 0.57 IAI46_01035 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase 0.79 23
Vibrio cholerae E7946 ATCC 55056 0.67 CSW01_12030 glutamate synthase large subunit 0.53 CSW01_08575 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase low > 62
Rahnella sp. WP5 0.67 EX31_RS12515 glutamate synthase large subunit 0.56 EX31_RS14710 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase low > 89
Pectobacterium carotovorum WPP14 0.67 HER17_RS19910 glutamate synthase large subunit 0.56 HER17_RS20685 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase low > 75
Erwinia tracheiphila SCR3 0.66 LU632_RS21315 gltB glutamate synthase large subunit 0.55 LU632_RS24030 metE 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase low > 74
Dickeya dianthicola 67-19 0.66 HGI48_RS01560 glutamate synthase large subunit 0.56 HGI48_RS00820 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase 0.71 63
Dickeya dadantii 3937 0.66 DDA3937_RS01665 glutamate synthase large subunit 0.56 DDA3937_RS20380 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase low > 74
Dickeya dianthicola ME23 0.66 DZA65_RS01635 glutamate synthase large subunit 0.56 DZA65_RS00875 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase low > 75
Escherichia coli ECOR38 0.66 HEPCGN_16760 gltB3 Glutamate synthase domain 3 0.56 HEPCGN_13025 metE 5-methyltetrahydropteroyltriglutamate--homocystei ne S-methyltransferase 0.94 13
Escherichia fergusonii Becca 0.66 EFB2_00611 Glutamate synthase [NADPH] large chain 0.56 EFB2_04808 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase low > 86
Escherichia coli Nissle 1917 0.66 ECOLIN_RS18475 glutamate synthase large subunit 0.56 ECOLIN_RS21980 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase low > 55
Escherichia coli BL21 0.66 ECD_03077 glutamate synthase, large subunit 0.56 ECD_03708 5-methyltetrahydropteroyltriglutamate- homocysteine S-methyltransferase 0.67 19
Escherichia coli ECRC62 0.66 BNILDI_01850 gltB glutamate synthase large subunit 0.56 BNILDI_05075 metE 5-methyltetrahydropteroyltriglutamate--homocystei ne S-methyltransferase 0.97 3
Escherichia coli BW25113 0.66 b3212 gltB glutamate synthase, large subunit (NCBI) 0.56 b3829 metE 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase (NCBI) 0.52 40
Escherichia coli ECRC101 0.66 MCAODC_08405 gltB glutamate synthase large subunit 0.56 MCAODC_04830 metE 5-methyltetrahydropteroyltriglutamate--homocystei ne S-methyltransferase low > 87
Klebsiella michiganensis M5al 0.66 BWI76_RS25315 glutamate synthase large subunit 0.56 BWI76_RS01280 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase low > 92
Escherichia coli ECRC100 0.66 OKFHMN_17885 gltB glutamate synthase large subunit 0.56 OKFHMN_14325 metE 5-methyltetrahydropteroyltriglutamate--homocystei ne S-methyltransferase 0.91 39
Escherichia coli ECRC102 0.66 NIAGMN_15645 gltB glutamate synthase large subunit 0.56 NIAGMN_12080 metE 5-methyltetrahydropteroyltriglutamate--homocystei ne S-methyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_00488 Glutamate synthase [NADPH] large chain 0.56 OHPLBJKB_04222 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase low > 73
Escherichia coli ECRC98 0.66 JDDGAC_21510 gltB glutamate synthase large subunit 0.56 JDDGAC_17950 metE 5-methyltetrahydropteroyltriglutamate--homocystei ne S-methyltransferase low > 86
Escherichia coli ECRC99 0.66 KEDOAH_10265 gltB glutamate synthase large subunit 0.56 KEDOAH_13825 metE 5-methyltetrahydropteroyltriglutamate--homocystei ne S-methyltransferase — —
Escherichia coli ECOR27 0.66 NOLOHH_09685 gltB glutamate synthase large subunit 0.56 NOLOHH_06455 metE 5-methyltetrahydropteroyltriglutamate--homocystei ne S-methyltransferase 0.79 71
Enterobacter sp. TBS_079 0.66 MPMX20_04126 Glutamate synthase [NADPH] large chain 0.56 MPMX20_04451 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF2956 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) 0.56 GFF254 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase (EC 2.1.1.14) low > 78
Enterobacter asburiae PDN3 0.66 EX28DRAFT_3275 Glutamate synthase domain 2 0.56 EX28DRAFT_4494 methionine synthase (B12-independent) (EC 2.1.1.14) 0.79 6
Pseudomonas sp. S08-1 0.59 OH686_10005 Glutamate synthase [NADPH] large chain 0.55 OH686_20470 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase low > 80
Pseudomonas fluorescens FW300-N2E2 0.58 Pf6N2E2_3752 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) 0.56 Pf6N2E2_5472 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase (EC 2.1.1.14) low > 103
Pseudomonas stutzeri RCH2 0.58 Psest_3711 Glutamate synthase domain 2 0.55 Psest_1452 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase low > 67
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_09375 glutamate synthase 0.55 AO356_17740 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase low > 104
Marinobacter adhaerens HP15 0.58 HP15_482 glutamate synthase subunit alpha 0.54 HP15_457 5-methyltetrahydropteroyltriglutamate- homocysteine S-methyltransferase — —
Pseudomonas sp. RS175 0.58 PFR28_05015 Glutamate synthase [NADPH] large chain 0.55 PFR28_03477 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase low > 88
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_272 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) 0.54 PfGW456L13_3767 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase (EC 2.1.1.14) low > 87
Pseudomonas fluorescens FW300-N2E3 0.58 AO353_12515 glutamate synthase 0.55 AO353_16215 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase low > 101
Pseudomonas fluorescens SBW25 0.58 PFLU_RS02045 glutamate synthase large subunit 0.54 PFLU_RS17405 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS02045 glutamate synthase large subunit 0.54 PFLU_RS17405 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase low > 109
Pseudomonas fluorescens FW300-N1B4 0.57 Pf1N1B4_1534 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) 0.57 Pf1N1B4_783 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase (EC 2.1.1.14) low > 87
Rhodanobacter denitrificans MT42 0.50 LRK55_RS10665 glutamate synthase large subunit 0.48 LRK55_RS11870 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase low > 63
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS10960 glutamate synthase large subunit 0.48 LRK54_RS12135 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase low > 59
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS16795 glutamate synthase large subunit 0.50 ABZR86_RS03225 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase low > 74
Rhodopseudomonas palustris CGA009 0.41 TX73_004590 glutamate synthase large subunit 0.51 TX73_012380 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase — —
Pedobacter sp. GW460-11-11-14-LB5 0.40 CA265_RS08700 glutamate synthase large subunit 0.50 CA265_RS21095 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase low > 88
Rhodospirillum rubrum S1H 0.40 Rru_A0019 Glutamate synthase (ferredoxin) (NCBI) 0.48 Rru_A1718 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase (NCBI) — —
Ralstonia solanacearum GMI1000 0.40 RS_RS14860 glutamate synthase subunit alpha 0.54 RS_RS20360 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 0.65 10
Mucilaginibacter yixingensis YX-36 DSM 26809 0.40 ABZR88_RS06905 glutamate synthase large subunit 0.49 ABZR88_RS18615 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase — —
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS06915 glutamate synthase subunit alpha 0.53 RALBFv3_RS20320 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase low > 76
Ralstonia solanacearum UW163 0.40 UW163_RS06700 glutamate synthase subunit alpha 0.53 UW163_RS18855 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase — —
Paraburkholderia sabiae LMG 24235 0.40 QEN71_RS28010 glutamate synthase-related protein 0.52 QEN71_RS19725 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase low > 153
Ralstonia solanacearum PSI07 0.40 RPSI07_RS10320 glutamate synthase subunit alpha 0.55 RPSI07_RS02545 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase 0.65 30
Ralstonia sp. UNC404CL21Col 0.40 ABZR87_RS02570 glutamate synthase-related protein 0.54 ABZR87_RS20880 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase low > 80
Variovorax sp. OAS795 0.39 ABID97_RS23225 glutamate synthase-related protein 0.48 ABID97_RS19395 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase low > 91
Cupriavidus basilensis FW507-4G11 0.39 RR42_RS18990 glutamate synthase 0.51 RR42_RS30660 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 0.65 22
Castellaniella sp019104865 MT123 0.39 ABCV34_RS11150 glutamate synthase-related protein 0.56 ABCV34_RS04445 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase low > 48
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS17855 glutamate synthase 0.53 BPHYT_RS26655 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase low > 109
Variovorax sp. SCN45 0.39 GFF5332 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) 0.53 GFF795 5-methyltetrahydropteroyltriglutamate--homocystei ne methyltransferase (EC 2.1.1.14) low > 127
Acidovorax sp. GW101-3H11 0.39 Ac3H11_4710 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) 0.51 Ac3H11_2345 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase (EC 2.1.1.14) 0.80 12
Mycobacterium tuberculosis H37Rv 0.39 Rv3859c Probable ferredoxin-dependent glutamate synthase [NADPH] (large subunit) GltB (L-glutamate synthase) (L-glutamate synthetase) (NADH-glutamate synthase) (glutamate synthase (NADH))(NADPH-GOGAT) 0.41 Rv1133c Probable 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE (methionine synthase, vitamin-B12 independent isozyme) — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.39 Echvi_1244 Glutamate synthase domain 2 0.50 Echvi_2559 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase low > 79
Caulobacter crescentus NA1000 Δfur 0.38 CCNA_03722 glutamate synthase (NADPH) large chain GltB 0.50 CCNA_00515 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase low > 67
Caulobacter crescentus NA1000 0.38 CCNA_03722 glutamate synthase (NADPH) large chain GltB 0.50 CCNA_00515 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 0.90 15
Bifidobacterium breve UCC2003 0.37 BBR_RS15255 glutamate synthase large subunit 0.41 BBR_RS15405 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase low > 34

Not shown: 29 genomes with orthologs for Sama_0857 only; 4 genomes with orthologs for Sama_2627 only