Conservation of cofitness between Sama_0886 and Sama_1309 in Shewanella amazonensis SB2B

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_0886 hypothetical protein (RefSeq) 1.0 Sama_1309 adenine phosphoribosyltransferase (RefSeq) 0.31 17
Shewanella sp. ANA-3 0.81 Shewana3_3020 hypothetical protein (RefSeq) 0.83 Shewana3_2447 adenine phosphoribosyltransferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.81 SO1354 hemolysin protein, putative (NCBI ptt file) 0.82 SO2012 apt adenine phosphoribosyltransferase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.80 Shew_1060 hypothetical protein (RefSeq) 0.85 Shew_2236 adenine phosphoribosyltransferase (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_02980 HlyC/CorC family transporter 0.81 CSW01_05360 adenine phosphoribosyltransferase low > 62
Alteromonas macleodii MIT1002 0.65 MIT1002_01294 Hemolysin C 0.72 MIT1002_02655 Adenine phosphoribosyltransferase low > 70
Klebsiella michiganensis M5al 0.63 BWI76_RS21540 membrane protein 0.71 BWI76_RS06815 adenine phosphoribosyltransferase low > 92
Klebsiella pneumoniae MKP103 0.62 KDGMDA_02235 magnesium/cobalt efflux protein 0.70 KDGMDA_14875 adenine phosphoribosyltransferase low > 95
Pantoea sp. MT58 0.62 IAI47_04360 HlyC/CorC family transporter 0.64 IAI47_14480 adenine phosphoribosyltransferase low > 76
Erwinia amylovora T8 0.61 OLJFJH_09640 magnesium/cobalt efflux protein 0.63 OLJFJH_17820 adenine phosphoribosyltransferase low > 58
Erwinia tracheiphila SCR3 0.61 LU632_RS15680 HlyC/CorC family transporter 0.70 LU632_RS18140 apt adenine phosphoribosyltransferase low > 74
Enterobacter asburiae PDN3 0.61 EX28DRAFT_2715 Putative Mg2+ and Co2+ transporter CorB 0.70 EX28DRAFT_2489 adenine phosphoribosyltransferase (EC 2.4.2.7) 0.71 3
Enterobacter sp. TBS_079 0.61 MPMX20_03482 hypothetical protein 0.71 MPMX20_01071 Adenine phosphoribosyltransferase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF4166 Hemolysins and related proteins containing CBS domains 0.70 GFF4387 Adenine phosphoribosyltransferase (EC 2.4.2.7) low > 78
Escherichia coli ECRC62 0.61 BNILDI_11640 yfjD UPF0053 inner membrane protein YfjD 0.72 BNILDI_22520 apt adenine phosphoribosyltransferase low > 75
Escherichia fergusonii Becca 0.61 EFB2_01280 hypothetical protein 0.72 EFB2_03589 Adenine phosphoribosyltransferase low > 86
Rahnella sp. WP5 0.61 EX31_RS07740 HlyC/CorC family transporter 0.72 EX31_RS22505 adenine phosphoribosyltransferase low > 89
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_01094 hypothetical protein 0.72 OHPLBJKB_03205 Adenine phosphoribosyltransferase low > 74
Erwinia tracheiphila HP pepo 2.2 0.61 IJEDHG_01545 UPF0053 inner membrane protein YfjD 0.70 IJEDHG_16625 apt adenine phosphoribosyltransferase low > 61
Escherichia coli ECOR27 0.61 NOLOHH_12835 yfjD UPF0053 inner membrane protein YfjD 0.72 NOLOHH_01100 apt adenine phosphoribosyltransferase low > 76
Escherichia coli ECOR38 0.61 HEPCGN_20280 yfjD UPF0053 inner membrane protein YfjD 0.72 HEPCGN_06785 apt adenine phosphoribosyltransferase low > 88
Escherichia coli ECRC99 0.61 KEDOAH_07060 yfjD UPF0053 inner membrane protein YfjD 0.71 KEDOAH_19795 apt adenine phosphoribosyltransferase — —
Escherichia coli ECRC98 0.61 JDDGAC_24825 yfjD UPF0053 inner membrane protein YfjD 0.71 JDDGAC_11820 apt adenine phosphoribosyltransferase low > 87
Escherichia coli ECRC100 0.61 OKFHMN_21160 yfjD UPF0053 inner membrane protein YfjD 0.71 OKFHMN_08170 apt adenine phosphoribosyltransferase low > 79
Escherichia coli ECRC102 0.60 NIAGMN_18930 yfjD UPF0053 inner membrane protein YfjD 0.71 NIAGMN_06225 apt adenine phosphoribosyltransferase low > 80
Escherichia coli Nissle 1917 0.60 ECOLIN_RS14760 HlyC/CorC family transporter 0.72 ECOLIN_RS02790 adenine phosphoribosyltransferase — —
Serratia liquefaciens MT49 0.60 IAI46_03905 HlyC/CorC family transporter 0.73 IAI46_05225 adenine phosphoribosyltransferase low > 86
Escherichia coli BW25113 0.60 b4461 yfjD predicted inner membrane protein (RefSeq) 0.72 b0469 apt adenine phosphoribosyltransferase (NCBI) low > 76
Pantoea agglomerans CFBP13505 P0401 0.60 PagCFBP13505_RS16605 DUF21 domain-containing protein 0.65 PagCFBP13505_RS10715 adenine phosphoribosyltransferase low > 74
Escherichia coli BL21 0.58 ECD_02501 UPF0053 family inner membrane protein 0.72 ECD_00420 adenine phosphoribosyltransferase low > 61
Marinobacter adhaerens HP15 0.57 HP15_755 Mg2+ and Co2+ transporter CorB 0.50 HP15_2549 adenine phosphoribosyltransferase low > 73
Pseudomonas segetis P6 0.52 MPMX49_01566 hypothetical protein 0.41 MPMX49_02302 Adenine phosphoribosyltransferase low > 75
Pseudomonas stutzeri RCH2 0.52 Psest_3136 Putative Mg2+ and Co2+ transporter CorB 0.41 Psest_2539 adenine phosphoribosyltransferase low > 67
Paraburkholderia graminis OAS925 0.41 ABIE53_003593 Mg2+/Co2+ transporter CorB 0.47 ABIE53_000725 adenine phosphoribosyltransferase low > 113
Paraburkholderia sabiae LMG 24235 0.41 QEN71_RS27300 HlyC/CorC family transporter 0.49 QEN71_RS01790 adenine phosphoribosyltransferase low > 153
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS17140 magnesium and cobalt efflux protein CorC 0.47 BPHYT_RS02940 adenine phosphoribosyltransferase low > 109
Ralstonia sp. UNC404CL21Col 0.40 ABZR87_RS01840 HlyC/CorC family transporter 0.49 ABZR87_RS07105 adenine phosphoribosyltransferase low > 80
Methylophilus sp. DMC18 0.39 GFF1740 hypothetical protein 0.49 GFF2315 Adenine phosphoribosyltransferase low > 43
Ralstonia solanacearum UW163 0.39 UW163_RS07450 HlyC/CorC family transporter 0.49 UW163_RS02365 adenine phosphoribosyltransferase — —
Ralstonia solanacearum IBSBF1503 0.39 RALBFv3_RS06175 HlyC/CorC family transporter 0.49 RALBFv3_RS11215 adenine phosphoribosyltransferase low > 76
Ralstonia solanacearum PSI07 0.39 RPSI07_RS11065 HlyC/CorC family transporter 0.49 RPSI07_RS22085 adenine phosphoribosyltransferase low > 81
Paraburkholderia bryophila 376MFSha3.1 0.38 H281DRAFT_06258 Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains 0.48 H281DRAFT_01920 adenine phosphoribosyltransferase low > 103
Ralstonia solanacearum GMI1000 0.38 RS_RS14125 HlyC/CorC family transporter 0.49 RS_RS02065 adenine phosphoribosyltransferase low > 80
Pseudomonas aeruginosa PA14 0.35 IKLFDK_19135 magnesium/cobalt efflux protein 0.42 IKLFDK_07370 adenine phosphoribosyltransferase 0.38 53
Dinoroseobacter shibae DFL-12 0.34 Dshi_1613 protein of unknown function DUF21 (RefSeq) 0.49 Dshi_2074 adenine phosphoribosyltransferase (RefSeq) — —
Sinorhizobium meliloti 1021 0.32 SMc00697 hypothetical protein 0.51 SMc02698 adenine phosphoribosyltransferase low > 103
Rhizobium sp. OAE497 0.31 ABIE40_RS17665 HlyC/CorC family transporter 0.49 ABIE40_RS13115 adenine phosphoribosyltransferase low > 107
Phaeobacter inhibens DSM 17395 0.30 PGA1_c14050 inner membrane protein 0.52 PGA1_c06370 adenine phosphoribosyltransferase Apt — —
Magnetospirillum magneticum AMB-1 0.30 AMB_RS19860 HlyC/CorC family transporter 0.41 AMB_RS14345 adenine phosphoribosyltransferase low > 64
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_876 Magnesium and cobalt efflux protein CorC 0.42 Pf1N1B4_3866 Adenine phosphoribosyltransferase (EC 2.4.2.7) low > 87
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_1713 Magnesium and cobalt efflux protein CorC 0.42 PfGW456L13_4072 Adenine phosphoribosyltransferase (EC 2.4.2.7) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_1279 CBS:Transporter-associated region 0.41 Psyr_3426 adenine phosphoribosyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_1279 CBS:Transporter-associated region 0.41 Psyr_3426 adenine phosphoribosyltransferase low > 86
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_06420 transporter 0.41 AO356_02490 adenine phosphoribosyltransferase low > 104
Pseudomonas sp. SVBP6 0.26 COO64_RS04865 transporter associated domain-containing protein 0.41 COO64_RS18635 adenine phosphoribosyltransferase low > 93
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_04400 transporter 0.42 AO353_00665 adenine phosphoribosyltransferase low > 101
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_3152 Magnesium and cobalt efflux protein CorC 0.41 Pf6N2E2_2324 Adenine phosphoribosyltransferase (EC 2.4.2.7) low > 103
Pseudomonas putida KT2440 0.26 PP_1459 CBS domain protein 0.41 PP_4266 Adenine phosphoribosyltransferase low > 96
Pseudomonas sp. BP01 0.25 JOY50_RS11660 transporter associated domain-containing protein 0.41 JOY50_RS00130 adenine phosphoribosyltransferase low > 84
Pseudomonas sp. DMC3 0.25 GFF1979 hypothetical protein 0.41 GFF710 Adenine phosphoribosyltransferase low > 89
Pseudomonas simiae WCS417 0.25 PS417_22935 hypothetical protein 0.41 PS417_20790 adenine phosphoribosyltransferase low > 88
Pseudomonas lactucae CFBP13502 0.25 GEMAOFIL_04736 hypothetical protein 0.41 GEMAOFIL_04303 Adenine phosphoribosyltransferase low > 93
Pseudomonas sp. RS175 0.25 PFR28_00324 hypothetical protein 0.41 PFR28_01078 Adenine phosphoribosyltransferase low > 88
Pseudomonas fluorescens SBW25 0.24 PFLU_RS24595 DUF21 domain-containing protein 0.41 PFLU_RS22400 adenine phosphoribosyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.24 PFLU_RS24595 DUF21 domain-containing protein 0.41 PFLU_RS22400 adenine phosphoribosyltransferase low > 109
Rhodopseudomonas palustris CGA009 0.21 TX73_002605 hemolysin family protein 0.51 TX73_023325 adenine phosphoribosyltransferase low > 86
Fusobacterium nucleatum SB010 0.21 HUW76_09050 HlyC/CorC family transporter 0.49 HUW76_09035 adenine phosphoribosyltransferase low > 35
Mucilaginibacter yixingensis YX-36 DSM 26809 0.20 ABZR88_RS17090 hemolysin family protein 0.41 ABZR88_RS01200 adenine phosphoribosyltransferase low > 71
Bacteroides ovatus ATCC 8483 0.17 BACOVA_05200 CBS domain protein 0.45 BACOVA_01366 adenine phosphoribosyltransferase low > 96
Cellulophaga baltica 18 0.16 M666_RS02460 hemolysin family protein 0.44 M666_RS19415 adenine phosphoribosyltransferase low > 67
Phocaeicola dorei CL03T12C01 0.16 ABI39_RS12760 HlyC/CorC family transporter 0.44 ABI39_RS05410 adenine phosphoribosyltransferase low > 72
Phocaeicola vulgatus CL09T03C04 0.16 HMPREF1058_RS16850 HlyC/CorC family transporter 0.43 HMPREF1058_RS11530 adenine phosphoribosyltransferase low > 67

Not shown: 6 genomes with orthologs for Sama_0886 only; 33 genomes with orthologs for Sama_1309 only