Conservation of cofitness between b0331 and b3771 in Escherichia coli BW25113

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0331 prpB 2-methylisocitrate lyase (NCBI) 1.0 b3771 ilvD dihydroxy-acid dehydratase (NCBI) 0.29 16
Escherichia coli BL21 1.00 ECD_00286 2-methylisocitrate lyase 1.00 ECD_03649 dihydroxyacid dehydratase low > 60
Escherichia coli ECRC62 1.00 BNILDI_23190 prpB methylisocitrate lyase 1.00 BNILDI_04750 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECOR27 1.00 NOLOHH_01775 prpB methylisocitrate lyase 1.00 NOLOHH_06775 ilvD dihydroxy-acid dehydratase low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03339 2-methylisocitrate lyase 1.00 OHPLBJKB_04282 Dihydroxy-acid dehydratase low > 73
Escherichia coli ECOR38 0.99 HEPCGN_07485 prpB methylisocitrate lyase 1.00 HEPCGN_13350 ilvD dihydroxy-acid dehydratase low > 85
Escherichia coli ECRC101 0.99 OKFHMN_08900 prpB methylisocitrate lyase 1.00 OKFHMN_14640 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECRC101 0.99 MCAODC_28130 prpB methylisocitrate lyase 1.00 MCAODC_05145 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECRC102 0.99 NIAGMN_06955 prpB methylisocitrate lyase 1.00 NIAGMN_12395 ilvD dihydroxy-acid dehydratase — —
Escherichia fergusonii Becca 0.99 EFB2_03706 2-methylisocitrate lyase 0.99 EFB2_04865 Dihydroxy-acid dehydratase low > 86
Escherichia coli ECRC99 0.99 KEDOAH_19065 prpB methylisocitrate lyase 1.00 KEDOAH_13510 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECRC98 0.99 JDDGAC_12555 prpB methylisocitrate lyase 1.00 JDDGAC_18260 ilvD dihydroxy-acid dehydratase — —
Escherichia coli Nissle 1917 0.98 ECOLIN_RS02150 methylisocitrate lyase 0.99 ECOLIN_RS21665 dihydroxy-acid dehydratase low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.90 GFF4263 Methylisocitrate lyase (EC 4.1.3.30) 0.97 GFF2901 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 78
Herbaspirillum seropedicae SmR1 0.80 HSERO_RS15660 2-methylisocitrate lyase 0.74 HSERO_RS02650 dihydroxy-acid dehydratase — —
Ralstonia solanacearum PSI07 0.77 RPSI07_RS14645 methylisocitrate lyase 0.29 RPSI07_RS12840 dihydroxy-acid dehydratase — —
Ralstonia solanacearum IBSBF1503 0.77 RALBFv3_RS02670 methylisocitrate lyase 0.29 RALBFv3_RS04535 dihydroxy-acid dehydratase — —
Pseudomonas stutzeri RCH2 0.77 Psest_2321 methylisocitrate lyase 0.75 Psest_0234 dihydroxy-acid dehydratase — —
Ralstonia solanacearum UW163 0.77 UW163_RS11055 methylisocitrate lyase 0.29 UW163_RS09135 dihydroxy-acid dehydratase — —
Ralstonia solanacearum GMI1000 0.77 RS_RS10050 methylisocitrate lyase 0.28 RS_RS12105 dihydroxy-acid dehydratase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.77 Psyr_2085 methylisocitrate lyase 0.74 Psyr_0469 dihydroxyacid dehydratase low > 86
Pseudomonas syringae pv. syringae B728a 0.77 Psyr_2085 methylisocitrate lyase 0.74 Psyr_0469 dihydroxyacid dehydratase low > 86
Ralstonia sp. UNC404CL21Col 0.76 ABZR87_RS14590 methylisocitrate lyase 0.75 ABZR87_RS00240 dihydroxy-acid dehydratase low > 80
Cupriavidus basilensis FW507-4G11 0.76 RR42_RS11260 Methylisocitrate lyase (EC 4.1.3.30) (from data) 0.29 RR42_RS16210 dihydroxy-acid dehydratase — —
Pseudomonas fluorescens FW300-N2E3 0.76 AO353_00900 2-methylisocitrate lyase 0.75 AO353_08345 dihydroxy-acid dehydratase low > 101
Pseudomonas fluorescens SBW25 0.76 PFLU_RS22690 methylisocitrate lyase 0.75 PFLU_RS28535 dihydroxy-acid dehydratase low > 109
Pseudomonas putida KT2440 0.76 PP_2334 2-methylisocitrate lyase 0.74 PP_5128 Dihydroxy-acid dehydratase 0.19 74
Pseudomonas fluorescens SBW25-INTG 0.76 PFLU_RS22690 methylisocitrate lyase 0.75 PFLU_RS28535 dihydroxy-acid dehydratase low > 109
Pseudomonas fluorescens FW300-N2C3 0.76 AO356_20865 2-methylisocitrate lyase 0.75 AO356_13250 dihydroxy-acid dehydratase low > 104
Pseudomonas fluorescens FW300-N2E2 0.76 Pf6N2E2_6061 Methylisocitrate lyase (EC 4.1.3.30) (from data) 0.75 Pf6N2E2_4564 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 103
Pseudomonas sp. RS175 0.75 PFR28_02928 2-methylisocitrate lyase 0.75 PFR28_04278 Dihydroxy-acid dehydratase low > 88
Paraburkholderia sabiae LMG 24235 0.75 QEN71_RS17555 methylisocitrate lyase 0.74 QEN71_RS21095 dihydroxy-acid dehydratase low > 153
Pseudomonas simiae WCS417 0.75 PS417_21080 2-methylisocitrate lyase 0.75 PS417_26890 dihydroxy-acid dehydratase — —
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_3819 Methylisocitrate lyase (EC 4.1.3.30) 0.75 Pf1N1B4_2303 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 87
Pseudomonas fluorescens GW456-L13 0.75 PfGW456L13_4118 Methylisocitrate lyase (EC 4.1.3.30) 0.75 PfGW456L13_973 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 87
Pseudomonas sp. S08-1 0.71 OH686_01690 methylisocitrate lyase 0.75 OH686_14100 dihydroxy-acid dehydratase low > 80
Castellaniella sp019104865 MT123 0.71 ABCV34_RS01670 methylisocitrate lyase 0.72 ABCV34_RS14810 dihydroxy-acid dehydratase low > 48
Xanthomonas campestris pv. campestris strain 8004 0.71 Xcc-8004.3981.1 Methylisocitrate lyase (EC 4.1.3.30) 0.72 Xcc-8004.451.1 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 74
Dyella japonica UNC79MFTsu3.2 0.69 ABZR86_RS08480 methylisocitrate lyase 0.28 ABZR86_RS15945 dihydroxy-acid dehydratase low > 74
Rhodanobacter sp. FW510-T8 0.66 OKGIIK_06565 prpB methylisocitrate lyase 0.27 OKGIIK_13600 ilvD dihydroxy-acid dehydratase low > 52
Vibrio cholerae E7946 ATCC 55056 0.65 CSW01_06735 methylisocitrate lyase 0.85 CSW01_00140 dihydroxy-acid dehydratase low > 62
Rhodanobacter denitrificans FW104-10B01 0.65 LRK54_RS00695 methylisocitrate lyase 0.26 LRK54_RS10320 dihydroxy-acid dehydratase low > 59
Rhodanobacter denitrificans MT42 0.65 LRK55_RS00470 methylisocitrate lyase 0.26 LRK55_RS09960 dihydroxy-acid dehydratase low > 63
Lysobacter sp. OAE881 0.65 ABIE51_RS06015 methylisocitrate lyase 0.27 ABIE51_RS17540 dihydroxy-acid dehydratase low > 62
Shewanella loihica PV-4 0.63 Shew_1820 prpB 2-methylisocitrate lyase (RefSeq) 0.78 Shew_0292 dihydroxy-acid dehydratase (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.62 MIT1002_03129 Methylisocitrate lyase 0.79 MIT1002_04041 Dihydroxy-acid dehydratase low > 70
Marinobacter adhaerens HP15 0.62 HP15_1932 methylisocitrate lyase 2 0.70 HP15_595 dihydroxy-acid dehydratase — —
Shewanella amazonensis SB2B 0.61 Sama_3294 prpB 2-methylisocitrate lyase (RefSeq) 0.79 Sama_3279 dihydroxy-acid dehydratase (RefSeq) low > 62
Shewanella sp. ANA-3 0.59 Shewana3_3825 prpB 2-methylisocitrate lyase (RefSeq) 0.80 Shewana3_0358 dihydroxy-acid dehydratase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.59 SO0345 prpB methylisocitrate lyase (NCBI ptt file) 0.80 SO4345 ilvD dihydroxy-acid dehydratase (NCBI ptt file) low > 76
Acinetobacter radioresistens SK82 0.59 MPMX26_01289 2-methylisocitrate lyase 0.29 MPMX26_03019 Dihydroxy-acid dehydratase — —
Rhodospirillum rubrum S1H 0.37 Rru_A2320 Ankyrin (NCBI) 0.71 Rru_A1786 Dihydroxy-acid dehydratase (NCBI) low > 58
Rhodopseudomonas palustris CGA009 0.35 TX73_012370 methylisocitrate lyase 0.74 TX73_007515 dihydroxy-acid dehydratase — —
Variovorax sp. OAS795 0.31 ABID97_RS18835 oxaloacetate decarboxylase 0.31 ABID97_RS17500 dihydroxy-acid dehydratase — —
Variovorax sp. SCN45 0.31 GFF268 Carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) 0.31 GFF471 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Azospirillum sp. SherDot2 0.30 MPMX19_04657 2,3-dimethylmalate lyase 0.74 MPMX19_05356 Dihydroxy-acid dehydratase — —
Burkholderia phytofirmans PsJN 0.30 BPHYT_RS26855 carboxyvinyl-carboxyphosphonate phosphorylmutase 0.74 BPHYT_RS10100 dihydroxy-acid dehydratase low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.30 GFF3032 Methylisocitrate lyase (EC 4.1.3.30) 0.64 GFF2073 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Paraburkholderia bryophila 376MFSha3.1 0.30 H281DRAFT_06209 carboxyvinyl-carboxyphosphonate phosphorylmutase 0.74 H281DRAFT_05312 dihydroxyacid dehydratase low > 103
Dinoroseobacter shibae DFL-12 0.29 Dshi_0689 isocitrate lyase family protein (RefSeq) 0.31 Dshi_0129 dihydroxy-acid dehydratase (RefSeq) — —
Paraburkholderia graminis OAS925 0.29 ABIE53_005902 2-methylisocitrate lyase-like PEP mutase family enzyme 0.74 ABIE53_006513 dihydroxy-acid dehydratase low > 113
Bosea sp. OAE506 0.29 ABIE41_RS16605 isocitrate lyase/PEP mutase family protein 0.29 ABIE41_RS15690 dihydroxy-acid dehydratase — —
Azospirillum brasilense Sp245 0.28 AZOBR_RS27785 carboxyvinyl-carboxyphosphonate phosphorylmutase 0.74 AZOBR_RS15015 dihydroxy-acid dehydratase low > 97

Not shown: 1 genomes with orthologs for b0331 only; 39 genomes with orthologs for b3771 only