Conservation of cofitness between b2744 and b3966 in Escherichia coli BW25113

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2744 surE acid phosphatase (NCBI) 1.0 b3966 btuB vitamin B12/cobalamin outer membrane transporter (NCBI) 0.23 13
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00989 '5'/3'-nucleotidase SurE' transl_table=11 1.00 OHPLBJKB_04084 Vitamin B12 transporter BtuB low > 73
Escherichia coli ECRC101 1.00 MCAODC_11005 surE 5'/3'-nucleotidase SurE 0.99 MCAODC_04030 btuB TonB-dependent vitamin B12 receptor BtuB — —
Escherichia coli ECRC98 1.00 JDDGAC_24145 surE 5'/3'-nucleotidase SurE 0.99 JDDGAC_17155 btuB TonB-dependent vitamin B12 receptor BtuB — —
Escherichia fergusonii Becca 1.00 EFB2_01166 5'/3'-nucleotidase SurE 0.55 EFB2_04644 Vitamin B12 transporter BtuB low > 86
Escherichia coli ECRC101 1.00 OKFHMN_20480 surE 5'/3'-nucleotidase SurE 0.99 OKFHMN_13530 btuB TonB-dependent vitamin B12 receptor BtuB — —
Escherichia coli ECRC62 1.00 BNILDI_10845 surE 5'/3'-nucleotidase SurE 1.00 BNILDI_05850 btuB TonB-dependent vitamin B12 receptor BtuB — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS15345 5'/3'-nucleotidase SurE 0.98 ECOLIN_RS22905 TonB-dependent vitamin B12 receptor BtuB low > 52
Escherichia coli ECRC102 1.00 NIAGMN_18250 surE 5'/3'-nucleotidase SurE 0.99 NIAGMN_11280 btuB TonB-dependent vitamin B12 receptor BtuB — —
Escherichia coli ECOR27 1.00 NOLOHH_12295 surE 5'/3'-nucleotidase SurE 1.00 NOLOHH_05675 btuB TonB-dependent vitamin B12 receptor BtuB low > 57
Escherichia coli ECRC99 1.00 KEDOAH_07660 surE 5'/3'-nucleotidase SurE 0.99 KEDOAH_14630 btuB TonB-dependent vitamin B12 receptor BtuB — —
Escherichia coli ECOR38 0.99 HEPCGN_19660 surE 5'/3'-nucleotidase SurE 1.00 HEPCGN_12185 btuB TonB-dependent vitamin B12 receptor BtuB low > 85
Enterobacter asburiae PDN3 0.92 EX28DRAFT_2840 3'-nucleotidase (EC 3.1.3.6)/5'-nucleotidase (EC 3.1.3.5)/exopolyphosphatase (EC 3.6.1.11) 0.79 EX28DRAFT_4429 TonB-dependent vitamin B12 receptor low > 76
Enterobacter sp. TBS_079 0.92 MPMX20_03630 5'/3'-nucleotidase SurE 0.65 MPMX20_04514 Vitamin B12 transporter BtuB low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF4792 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) 0.90 GFF2352 Outer membrane vitamin B12 receptor BtuB low > 78
Klebsiella michiganensis M5al 0.92 BWI76_RS22660 5'/3'-nucleotidase SurE 0.53 BWI76_RS00890 vitamin B12/cobalamin outer membrane transporter low > 92
Pantoea sp. MT58 0.87 IAI47_04220 5'/3'-nucleotidase SurE 0.67 IAI47_00955 TonB-dependent vitamin B12 receptor BtuB low > 76
Serratia liquefaciens MT49 0.83 IAI46_03775 5'/3'-nucleotidase SurE 0.70 IAI46_24450 TonB-dependent vitamin B12 receptor BtuB low > 86
Rahnella sp. WP5 0.79 EX31_RS07840 5'/3'-nucleotidase SurE 0.66 EX31_RS14135 TonB-dependent vitamin B12 receptor BtuB low > 89
Vibrio cholerae E7946 ATCC 55056 0.55 CSW01_02820 5'-nucleotidase SurE 0.30 CSW01_00790 vitamin B12 transporter BtuB low > 62
Dyella japonica UNC79MFTsu3.2 0.53 ABZR86_RS06595 5'/3'-nucleotidase SurE 0.20 ABZR86_RS14720 TonB-dependent vitamin B12 receptor low > 74
Rhodanobacter sp. FW510-T8 0.53 OKGIIK_08115 surE 5'/3'-nucleotidase SurE 0.22 OKGIIK_05465 btuB TonB-dependent vitamin B12 receptor low > 52
Rhodanobacter denitrificans MT42 0.53 LRK55_RS16375 5'/3'-nucleotidase SurE 0.17 LRK55_RS07560 TonB-dependent vitamin B12 receptor low > 63
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS16650 5'/3'-nucleotidase SurE 0.17 LRK54_RS07830 TonB-dependent vitamin B12 receptor low > 59
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.3131.1 hypothetical protein 0.18 Xcc-8004.1388.1 Outer membrane vitamin B12 receptor BtuB low > 74
Lysobacter sp. OAE881 0.50 ABIE51_RS06485 5'/3'-nucleotidase SurE 0.22 ABIE51_RS18005 TonB-dependent vitamin B12 receptor low > 62
Marinobacter adhaerens HP15 0.48 HP15_1279 stationary-phase survival protein SurE 0.15 HP15_3953 outer membrane receptor for transport of vitamin B — —
Pseudomonas sp. S08-1 0.45 OH686_18170 5'/3'-nucleotidase SurE 0.17 OH686_15755 Outer membrane vitamin B12 receptor BtuB low > 80
Pseudomonas stutzeri RCH2 0.45 Psest_2810 5'/3'-nucleotidase SurE 0.20 Psest_3016 TonB-dependent vitamin B12 receptor 0.36 6
Pseudomonas putida KT2440 0.44 PP_1620 5'(3')-nucleotidase and polyphosphatase 0.18 PP_0525 TonB-dependent receptor, B12 family low > 96
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS22255 5'/3'-nucleotidase SurE 0.13 QEN71_RS25145 TonB-dependent receptor low > 153
Variovorax sp. SCN45 0.44 GFF2845 5'-nucleotidase SurE (EC 3.1.3.5) 0.16 GFF450 Outer membrane vitamin B12 receptor BtuB 0.83 65
Paraburkholderia graminis OAS925 0.44 ABIE53_002054 5'-nucleotidase 0.15 ABIE53_001246 vitamin B12 transporter low > 113
Dechlorosoma suillum PS 0.44 Dsui_1968 5''/3''-nucleotidase SurE 0.08 Dsui_1660 outer membrane cobalamin receptor protein low > 51
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS09100 stationary phase survival protein SurE 0.14 BPHYT_RS04850 TonB-denpendent receptor low > 109
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_16600 stationary phase survival protein SurE 0.16 AO353_06660 TonB-dependent receptor low > 101
Paraburkholderia bryophila 376MFSha3.1 0.43 H281DRAFT_00840 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase 0.15 H281DRAFT_00136 vitamin B12 transporter low > 103
Pseudomonas simiae WCS417 0.43 PS417_06350 stationary phase survival protein SurE 0.16 PS417_25210 TonB-dependent receptor low > 88
Pseudomonas fluorescens SBW25 0.43 PFLU_RS06415 5'/3'-nucleotidase SurE 0.16 PFLU_RS26850 TonB-dependent receptor low > 109
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_3112 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) 0.17 Pf1N1B4_2660 Outer membrane vitamin B12 receptor BtuB low > 87
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS06415 5'/3'-nucleotidase SurE 0.16 PFLU_RS26850 TonB-dependent receptor low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF3879 5-nucleotidase SurE (EC 3.1.3.5) 0.17 GFF3976 Outer membrane vitamin B12 receptor BtuB — —
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_4678 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) 0.16 PfGW456L13_1324 Outer membrane vitamin B12 receptor BtuB low > 87
Castellaniella sp019104865 MT123 0.43 ABCV34_RS03030 5'/3'-nucleotidase SurE 0.14 ABCV34_RS14545 TonB-dependent receptor low > 48
Ralstonia solanacearum PSI07 0.42 RPSI07_RS18155 5'/3'-nucleotidase SurE 0.13 RPSI07_RS12875 TonB-dependent receptor low > 81
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS13200 stationary phase survival protein SurE 0.16 RR42_RS16140 TonB-dependent receptor low > 128
Ralstonia solanacearum GMI1000 0.42 RS_RS06030 5'-nucleotidase SurE 0.13 RS_RS12050 TonB-dependent receptor low > 80
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS10860 5'/3'-nucleotidase SurE 0.14 ABZR87_RS00095 TonB-dependent receptor — —
Ralstonia solanacearum UW163 0.42 UW163_RS12685 5'/3'-nucleotidase SurE 0.14 UW163_RS09175 TonB-dependent receptor — —
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS15220 5'/3'-nucleotidase SurE 0.14 RALBFv3_RS04495 TonB-dependent receptor 0.40 38
Acidovorax sp. GW101-3H11 0.41 Ac3H11_1784 5-nucleotidase SurE (EC 3.1.3.5) 0.13 Ac3H11_985 Outer membrane vitamin B12 receptor BtuB low > 79
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_3040 5-nucleotidase SurE (EC 3.1.3.5) 0.16 Pf6N2E2_4930 Outer membrane vitamin B12 receptor BtuB low > 103
Pseudomonas sp. RS175 0.40 PFR28_00424 '5'-nucleotidase SurE' transl_table=11 0.16 PFR28_03938 Vitamin B12 transporter BtuB low > 88
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_05900 stationary phase survival protein SurE 0.15 AO356_14985 TonB-dependent receptor low > 104
Azospirillum brasilense Sp245 0.36 AZOBR_RS15460 5'-nucleotidase 0.14 AZOBR_RS19160 outer membrane cobalamin receptor protein BtuB low > 97
Acinetobacter radioresistens SK82 0.36 MPMX26_01054 5'-nucleotidase SurE 0.13 MPMX26_02619 Vitamin B12 transporter BtuB low > 36
Rhodospirillum rubrum S1H 0.34 Rru_A1769 Acid phosphatase (NCBI) 0.12 Rru_A0488 TonB-dependent receptor (NCBI) — —
Caulobacter crescentus NA1000 Δfur 0.34 CCNA_02077 5'(3')-nucleotidase/polyphosphatase SurE 0.13 CCNA_01826 vitamin B12 receptor low > 67
Caulobacter crescentus NA1000 0.34 CCNA_02077 5'(3')-nucleotidase/polyphosphatase SurE 0.13 CCNA_01826 vitamin B12 receptor low > 66
Brevundimonas sp. GW460-12-10-14-LB2 0.34 A4249_RS04645 5'/3'-nucleotidase SurE 0.12 A4249_RS12105 TonB-dependent receptor 0.59 38
Mucilaginibacter yixingensis YX-36 DSM 26809 0.29 ABZR88_RS03555 5'/3'-nucleotidase SurE 0.12 ABZR88_RS09845 TonB-dependent siderophore receptor — —
Pedobacter sp. GW460-11-11-14-LB5 0.28 CA265_RS16310 5'/3'-nucleotidase SurE 0.12 CA265_RS09235 hypothetical protein low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.26 Echvi_3388 5'/3'-nucleotidase SurE 0.08 Echvi_3755 Outer membrane cobalamin receptor protein low > 79
Phocaeicola dorei CL03T12C01 0.25 ABI39_RS09735 5'/3'-nucleotidase SurE 0.08 ABI39_RS02085 TonB-dependent receptor low > 72

Not shown: 32 genomes with orthologs for b2744 only; 5 genomes with orthologs for b3966 only