Conservation of cofitness between b2763 and b3941 in Escherichia coli BW25113

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2763 cysI sulfite reductase, beta subunit, NAD(P)-binding, heme-binding (NCBI) 1.0 b3941 metF 5,10-methylenetetrahydrofolate reductase (NCBI) 0.93 12
Escherichia coli BL21 1.00 ECD_02608 sulfite reductase, beta subunit, NAD(P)-binding, heme-binding 1.00 ECD_03827 5,10-methylenetetrahydrofolate reductase low > 60
Escherichia coli ECRC98 1.00 JDDGAC_24040 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 1.00 JDDGAC_17290 metF methylenetetrahydrofolate reductase
Escherichia coli ECRC101 1.00 MCAODC_10900 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 1.00 MCAODC_04165 metF methylenetetrahydrofolate reductase
Escherichia coli ECRC62 1.00 BNILDI_10740 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 1.00 BNILDI_05725 metF methylenetetrahydrofolate reductase
Escherichia coli ECRC101 1.00 OKFHMN_20375 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 1.00 OKFHMN_13665 metF methylenetetrahydrofolate reductase
Escherichia fergusonii Becca 1.00 EFB2_01154 Sulfite reductase [NADPH] hemoprotein beta-component 0.99 EFB2_04672 5,10-methylenetetrahydrofolate reductase low > 86
Escherichia coli ECRC102 1.00 NIAGMN_18145 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 1.00 NIAGMN_11420 metF methylenetetrahydrofolate reductase
Escherichia coli Nissle 1917 1.00 ECOLIN_RS15405 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.99 ECOLIN_RS22760 methylenetetrahydrofolate reductase low > 52
Escherichia coli ECRC99 1.00 KEDOAH_07750 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 1.00 KEDOAH_14495 metF methylenetetrahydrofolate reductase
Escherichia coli ECOR27 1.00 NOLOHH_12190 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 1.00 NOLOHH_05810 metF methylenetetrahydrofolate reductase low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_00970 Sulfite reductase [NADPH] hemoprotein beta-component 1.00 OHPLBJKB_04109 5,10-methylenetetrahydrofolate reductase low > 73
Escherichia coli ECOR38 0.99 HEPCGN_19090 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 1.00 HEPCGN_12310 metF methylenetetrahydrofolate reductase low > 85
Enterobacter sp. TBS_079 0.96 MPMX20_03642 Sulfite reductase [NADPH] hemoprotein beta-component 0.95 MPMX20_04529 5,10-methylenetetrahydrofolate reductase 0.58 62
Enterobacter asburiae PDN3 0.95 EX28DRAFT_2852 sulfite reductase (NADPH) hemoprotein, beta-component 0.94 EX28DRAFT_4413 5,10-methylenetetrahydrofolate reductase, prokaryotic form 0.56 74
Klebsiella michiganensis M5al 0.95 BWI76_RS22760 sulfite reductase subunit beta 0.95 BWI76_RS00805 5,10-methylenetetrahydrofolate reductase 0.82 30
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF4819 Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) 0.97 GFF2329 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) low > 78
Pantoea sp. MT58 0.88 IAI47_04155 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.92 IAI47_00890 methylenetetrahydrofolate reductase low > 76
Serratia liquefaciens MT49 0.87 IAI46_03690 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.91 IAI46_24530 methylenetetrahydrofolate reductase low > 86
Erwinia tracheiphila SCR3 0.86 LU632_RS06405 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.86 LU632_RS19630 metF methylenetetrahydrofolate reductase low > 74
Pectobacterium carotovorum WPP14 0.85 HER17_RS04240 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.88 HER17_RS00950 methylenetetrahydrofolate reductase low > 75
Dickeya dadantii 3937 0.85 DDA3937_RS16940 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.90 DDA3937_RS00960 methylenetetrahydrofolate reductase low > 74
Dickeya dianthicola 67-19 0.84 HGI48_RS17010 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.88 HGI48_RS20415 methylenetetrahydrofolate reductase low > 71
Dickeya dianthicola ME23 0.84 DZA65_RS18085 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.88 DZA65_RS21460 methylenetetrahydrofolate reductase 0.62 68
Rahnella sp. WP5 0.82 EX31_RS07900 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.89 EX31_RS14205 methylenetetrahydrofolate reductase 0.91 48
Alteromonas macleodii MIT1002 0.74 MIT1002_03379 Sulfite reductase [NADPH] hemoprotein beta-component 0.70 MIT1002_03670 5,10-methylenetetrahydrofolate reductase
Vibrio cholerae E7946 ATCC 55056 0.73 CSW01_02015 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.79 CSW01_13560 methylenetetrahydrofolate reductase 0.58 27
Shewanella amazonensis SB2B 0.70 Sama_2838 sulfite reductase subunit beta (RefSeq) 0.75 Sama_3169 metF 5,10-methylenetetrahydrofolate reductase (RefSeq) 0.96 15
Shewanella sp. ANA-3 0.59 Shewana3_0856 sulfite reductase subunit beta (RefSeq) 0.75 Shewana3_3612 metF 5,10-methylenetetrahydrofolate reductase (RefSeq) 0.91 35
Shewanella oneidensis MR-1 0.59 SO3737 cysI sulfite reductase (NADPH) hemoprotein beta-component (cysI) (NCBI ptt file) 0.75 SO4054 metF 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) 0.94 27
Shewanella loihica PV-4 0.58 Shew_0666 sulfite reductase subunit beta (RefSeq) 0.76 Shew_0522 metF 5,10-methylenetetrahydrofolate reductase (RefSeq) 0.92 19
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS05900 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.35 ABZR86_RS11570 methylenetetrahydrofolate reductase [NAD(P)H] 0.96 21
Kangiella aquimarina DSM 16071 0.49 B158DRAFT_2161 sulfite reductase (NADPH) beta subunit (EC 1.8.1.2) 0.59 B158DRAFT_2461 5,10-methylenetetrahydrofolate reductase (NAD(P)) (EC 1.5.1.20) low > 40
Lysobacter sp. OAE881 0.46 ABIE51_RS15830 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.34 ABIE51_RS16490 methylenetetrahydrofolate reductase [NAD(P)H] 0.96 30
Xanthomonas campestris pv. campestris strain 8004 0.45 Xcc-8004.1257.1 Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) 0.36 Xcc-8004.4336.1 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 0.86 12
Rhodanobacter sp. FW510-T8 0.45 OKGIIK_05965 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.35 OKGIIK_11830 metF methylenetetrahydrofolate reductase [NAD(P)H] low > 52
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS00925 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.35 LRK54_RS12030 methylenetetrahydrofolate reductase [NAD(P)H] 0.58 29
Castellaniella sp019104865 MT123 0.45 ABCV34_RS00215 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.34 ABCV34_RS13550 methylenetetrahydrofolate reductase [NAD(P)H] low > 48
Caulobacter crescentus NA1000 0.09 CCNA_01177 sulfite reductase, beta subunit 0.47 CCNA_02224 methylenetetrahydrofolate reductase 0.92 20
Caulobacter crescentus NA1000 Δfur 0.09 CCNA_01177 sulfite reductase, beta subunit 0.47 CCNA_02224 methylenetetrahydrofolate reductase low > 67
Azospirillum sp. SherDot2 0.09 MPMX19_00652 Sulfite reductase [ferredoxin] 0.54 MPMX19_00635 5,10-methylenetetrahydrofolate reductase 0.83 35
Phaeobacter inhibens DSM 17395 0.08 PGA1_c20760 putative nitrite/sulfite reductase 0.40 PGA1_c11700 5,10-methylenetetrahydrofolate reductase MetF
Pseudomonas fluorescens FW300-N1B4 0.08 Pf1N1B4_4656 Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) 0.35 Pf1N1B4_2384 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) low > 87
Ralstonia solanacearum UW163 0.08 UW163_RS09070 sulfite reductase 0.38 UW163_RS03705 methylenetetrahydrofolate reductase [NAD(P)H]
Ralstonia solanacearum IBSBF1503 0.08 RALBFv3_RS04600 sulfite reductase 0.38 RALBFv3_RS09875 methylenetetrahydrofolate reductase [NAD(P)H] 0.50 20
Dinoroseobacter shibae DFL-12 0.08 Dshi_1153 nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein (RefSeq) 0.36 Dshi_2080 5,10-methylenetetrahydrofolate reductase (RefSeq)
Azospirillum brasilense Sp245 0.08 AZOBR_RS10125 sulfite reductase 0.54 AZOBR_RS24245 5 10-methylenetetrahydrofolate reductase low > 97
Sphingomonas koreensis DSMZ 15582 0.08 Ga0059261_1498 Sulfite reductase, beta subunit (hemoprotein) 0.54 Ga0059261_0992 5,10-methylenetetrahydrofolate reductase, prokaryotic form low > 68
Rhodospirillum rubrum S1H 0.08 Rru_A1931 Ferredoxin--nitrite reductase (NCBI) 0.51 Rru_A1530 5,10-methylenetetrahydrofolate reductase (NCBI)
Ralstonia sp. UNC404CL21Col 0.08 ABZR87_RS00210 nitrite/sulfite reductase 0.37 ABZR87_RS04865 methylenetetrahydrofolate reductase [NAD(P)H] 0.69 41
Ralstonia solanacearum GMI1000 0.08 RS_RS12170 nitrite/sulfite reductase 0.38 RS_RS00460 methylenetetrahydrofolate reductase [NAD(P)H] 0.56 11
Ralstonia solanacearum PSI07 0.08 RPSI07_RS12775 nitrite/sulfite reductase 0.38 RPSI07_RS23495 methylenetetrahydrofolate reductase [NAD(P)H] 0.41 73
Herbaspirillum seropedicae SmR1 0.08 HSERO_RS15550 sulfite reductase 0.35 HSERO_RS21425 5,10-methylenetetrahydrofolate reductase low > 78
Paraburkholderia graminis OAS925 0.08 ABIE53_001226 sulfite reductase (NADPH) hemoprotein beta-component 0.39 ABIE53_000061 methylenetetrahydrofolate reductase (NADPH) 0.89 11
Dechlorosoma suillum PS 0.08 Dsui_1986 sulfite reductase, beta subunit (hemoprotein) 0.38 Dsui_0640 5,10-methylenetetrahydrofolate reductase
Bosea sp. OAE506 0.07 ABIE41_RS21305 NirA family protein 0.50 ABIE41_RS12475 methylenetetrahydrofolate reductase [NAD(P)H] 0.25 48
Paraburkholderia bryophila 376MFSha3.1 0.07 H281DRAFT_00114 sulfite reductase (NADPH) beta subunit 0.40 H281DRAFT_05801 5,10-methylenetetrahydrofolate reductase (NAD(P)) 0.46 60
Sinorhizobium meliloti 1021 0.07 SMc02124 nitrite reductase 0.36 SMc01843 5,10-methylenetetrahydrofolate reductase 0.95 8
Burkholderia phytofirmans PsJN 0.07 BPHYT_RS04725 sulfite reductase 0.38 BPHYT_RS18705 5,10-methylenetetrahydrofolate reductase 0.52 89
Paraburkholderia sabiae LMG 24235 0.07 QEN71_RS25255 nitrite/sulfite reductase 0.41 QEN71_RS28715 methylenetetrahydrofolate reductase [NAD(P)H] 0.91 25
Pseudomonas putida KT2440 0.06 PP_2371 Sulphite reductase hemoprotein, beta subunit 0.36 PP_4977 5,10-methylenetetrahydrofolate reductase 0.48 58
Pseudomonas fluorescens FW300-N2E2 0.06 Pf6N2E2_2073 Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) 0.36 Pf6N2E2_4638 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 0.69 42

Not shown: 2 genomes with orthologs for b2763 only; 38 genomes with orthologs for b3941 only