Conservation of cofitness between b1623 and b3652 in Escherichia coli BW25113

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b1623 add adenosine deaminase (NCBI) 1.0 b3652 recG ATP-dependent DNA helicase (NCBI) 0.20 9
Escherichia coli ECRC62 1.00 BNILDI_16885 add adenosine deaminase 1.00 BNILDI_04090 recG ATP-dependent DNA helicase RecG — —
Escherichia coli ECOR27 1.00 NOLOHH_18095 add adenosine deaminase 0.99 NOLOHH_07425 recG ATP-dependent DNA helicase RecG — —
Escherichia coli BL21 1.00 ECD_01592 adenosine deaminase 1.00 ECD_03509 ATP-dependent DNA helicase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02103 Aminodeoxyfutalosine deaminase 1.00 OHPLBJKB_00049 ATP-dependent DNA helicase RecG low > 73
Escherichia coli ECRC98 1.00 JDDGAC_02170 add adenosine deaminase 0.99 JDDGAC_19170 recG ATP-dependent DNA helicase RecG — —
Escherichia coli ECRC101 1.00 MCAODC_17830 add adenosine deaminase 0.99 MCAODC_06055 recG ATP-dependent DNA helicase RecG — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS09055 adenosine deaminase 0.99 ECOLIN_RS20800 ATP-dependent DNA helicase RecG — —
Escherichia coli ECRC99 1.00 KEDOAH_00525 add adenosine deaminase 0.99 KEDOAH_12600 recG ATP-dependent DNA helicase RecG — —
Escherichia fergusonii Becca 1.00 EFB2_02369 Adenosine deaminase 0.99 EFB2_00136 ATP-dependent DNA helicase RecG low > 86
Escherichia coli ECRC101 1.00 OKFHMN_27580 add adenosine deaminase 0.99 OKFHMN_15545 recG ATP-dependent DNA helicase RecG — —
Escherichia coli ECOR38 0.99 HEPCGN_05960 add adenosine deaminase 0.99 HEPCGN_14365 recG ATP-dependent DNA helicase RecG low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF1811 Adenosine deaminase (EC 3.5.4.4) 0.94 GFF355 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 78
Enterobacter asburiae PDN3 0.89 EX28DRAFT_1618 adenosine deaminase 0.93 EX28DRAFT_3901 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.49 35
Enterobacter sp. TBS_079 0.89 MPMX20_02015 Adenosine deaminase 0.92 MPMX20_00084 ATP-dependent DNA helicase RecG 0.16 38
Klebsiella michiganensis M5al 0.80 BWI76_RS16325 adenosine deaminase 0.91 BWI76_RS27440 DNA helicase RecG low > 92
Serratia liquefaciens MT49 0.78 IAI46_11540 adenosine deaminase 0.84 IAI46_24905 ATP-dependent DNA helicase RecG low > 86
Rahnella sp. WP5 0.78 EX31_RS06860 adenosine deaminase 0.80 EX31_RS15820 ATP-dependent DNA helicase RecG low > 89
Pantoea sp. MT58 0.75 IAI47_10365 adenosine deaminase 0.84 IAI47_00500 ATP-dependent DNA helicase RecG low > 76
Pectobacterium carotovorum WPP14 0.72 HER17_RS10775 adenosine deaminase 0.82 HER17_RS21395 ATP-dependent DNA helicase RecG low > 75
Dickeya dianthicola ME23 0.72 DZA65_RS11110 adenosine deaminase 0.80 DZA65_RS22160 ATP-dependent DNA helicase RecG low > 75
Dickeya dianthicola 67-19 0.71 HGI48_RS10630 adenosine deaminase 0.80 HGI48_RS21190 ATP-dependent DNA helicase RecG low > 71
Dickeya dadantii 3937 0.71 DDA3937_RS10630 adenosine deaminase 0.80 DDA3937_RS00170 ATP-dependent DNA helicase RecG low > 74
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_13875 adenosine deaminase 0.66 CSW01_13680 DNA helicase RecG low > 62
Alteromonas macleodii MIT1002 0.63 MIT1002_02946 Adenine deaminase 0.62 MIT1002_00111 ATP-dependent DNA helicase RecG low > 70
Shewanella sp. ANA-3 0.63 Shewana3_4117 adenosine deaminase (RefSeq) 0.65 Shewana3_0348 ATP-dependent DNA helicase RecG (RefSeq) low > 73
Shewanella oneidensis MR-1 0.62 SO4731 add Adenosine deaminase (EC 3.5.4.4) (from data) 0.64 SO4364 recG ATP-dependent DNA helicase RecG (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.62 Sama_0085 adenosine deaminase (RefSeq) 0.65 Sama_3375 ATP-dependent DNA helicase RecG (RefSeq) low > 62
Shewanella loihica PV-4 0.59 Shew_3721 adenosine deaminase (RefSeq) 0.64 Shew_3507 ATP-dependent DNA helicase RecG (RefSeq) low > 60
Variovorax sp. OAS795 0.23 ABID97_RS22065 adenosine deaminase 0.40 ABID97_RS01575 ATP-dependent DNA helicase RecG low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.23 GFF210 Adenosine deaminase (EC 3.5.4.4) 0.41 GFF2802 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 90
Acinetobacter radioresistens SK82 0.23 MPMX26_01079 Adenine deaminase 0.52 MPMX26_02732 ATP-dependent DNA helicase RecG low > 36
Acidovorax sp. GW101-3H11 0.23 Ac3H11_1114 Adenosine deaminase (EC 3.5.4.4) 0.44 Ac3H11_781 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 79
Variovorax sp. SCN45 0.22 GFF1862 Adenosine deaminase (EC 3.5.4.4) 0.38 GFF5538 ATP-dependent DNA helicase RecG (EC 3.6.4.12) low > 127
Caulobacter crescentus NA1000 0.22 CCNA_03284 Adenosine deaminase (EC 3.5.4.4) (from data) 0.31 CCNA_01504 ATP-dependent DNA helicase recG low > 66
Caulobacter crescentus NA1000 Δfur 0.22 CCNA_03284 adenosine deaminase 0.31 CCNA_01504 ATP-dependent DNA helicase recG low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.22 A4249_RS09295 adenosine deaminase 0.28 A4249_RS04765 ATP-dependent DNA helicase RecG low > 48
Pseudomonas simiae WCS417 0.21 PS417_03205 adenine deaminase 0.55 PS417_27870 ATP-dependent DNA helicase RecG low > 88
Pseudomonas fluorescens SBW25 0.21 PFLU_RS03285 adenosine deaminase 0.55 PFLU_RS29550 ATP-dependent DNA helicase RecG low > 109
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS03285 adenosine deaminase 0.55 PFLU_RS29550 ATP-dependent DNA helicase RecG low > 109
Pseudomonas sp. S08-1 0.21 OH686_03320 adenosine deaminase 0.54 OH686_13505 ATP-dependent DNA helicase RecG low > 80
Rhodospirillum rubrum S1H 0.21 Rru_A0766 Adenosine deaminase (NCBI) 0.30 Rru_A1728 ATP-dependent DNA helicase RecG (NCBI) — —
Pseudomonas fluorescens FW300-N2E3 0.21 AO353_06115 adenosine deaminase 0.55 AO353_09320 ATP-dependent DNA helicase RecG low > 101
Pseudomonas fluorescens GW456-L13 0.21 PfGW456L13_16 Adenosine deaminase (EC 3.5.4.4) 0.55 PfGW456L13_772 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 87
Rhizobium sp. OAE497 0.21 ABIE40_RS00830 adenosine deaminase 0.34 ABIE40_RS09300 ATP-dependent DNA helicase RecG low > 107
Pseudomonas syringae pv. syringae B728a ΔmexB 0.20 Psyr_0661 adenosine deaminase 0.54 Psyr_0201 ATP-dependent DNA helicase RecG low > 86
Pseudomonas fluorescens FW300-N1B4 0.20 Pf1N1B4_1252 Adenosine deaminase (EC 3.5.4.4) 0.55 Pf1N1B4_2105 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 87
Pseudomonas syringae pv. syringae B728a 0.20 Psyr_0661 adenosine deaminase 0.54 Psyr_0201 ATP-dependent DNA helicase RecG low > 86
Pseudomonas putida KT2440 0.20 PP_0591 Adenine deaminase 0.55 PP_5310 junction-specific ATP-dependent DNA helicase low > 96
Pseudomonas sp. RS175 0.20 PFR28_05253 Adenine deaminase 0.54 PFR28_04435 ATP-dependent DNA helicase RecG low > 88
Pseudomonas stutzeri RCH2 0.20 Psest_0743 adenosine deaminase 0.55 Psest_4192 ATP-dependent DNA helicase RecG — —
Castellaniella sp019104865 MT123 0.20 ABCV34_RS01605 adenosine deaminase 0.43 ABCV34_RS03570 ATP-dependent DNA helicase RecG low > 48
Pseudomonas fluorescens FW300-N2C3 0.20 AO356_08025 adenosine deaminase 0.54 AO356_12380 ATP-dependent DNA helicase RecG low > 104
Herbaspirillum seropedicae SmR1 0.20 HSERO_RS21260 adenosine deaminase 0.44 HSERO_RS06165 ATP-dependent DNA helicase RecG low > 78
Pseudomonas fluorescens FW300-N2E2 0.20 Pf6N2E2_3478 Adenosine deaminase (EC 3.5.4.4) 0.54 Pf6N2E2_4352 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 103
Mycobacterium tuberculosis H37Rv 0.20 Rv3313c Probable adenosine deaminase Add (adenosine aminohydrolase) 0.25 Rv2973c Probable ATP-dependent DNA helicase RecG low > 58
Cupriavidus basilensis FW507-4G11 0.20 RR42_RS05325 adenine deaminase 0.44 RR42_RS17390 ATP-dependent DNA helicase RecG low > 128
Agrobacterium fabrum C58 0.19 Atu0136 adenosine deaminase 0.34 Atu1780 ATP-dependent DNA helicase low > 89
Sphingomonas koreensis DSMZ 15582 0.19 Ga0059261_0206 adenosine deaminase 0.30 Ga0059261_0958 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 68
Paraburkholderia sabiae LMG 24235 0.19 QEN71_RS03905 adenosine deaminase 0.45 QEN71_RS26630 ATP-dependent DNA helicase RecG — —
Burkholderia phytofirmans PsJN 0.18 BPHYT_RS15095 adenine deaminase 0.45 BPHYT_RS03400 ATP-dependent DNA helicase RecG low > 109
Paraburkholderia bryophila 376MFSha3.1 0.18 H281DRAFT_03964 adenosine deaminase 0.45 H281DRAFT_04672 ATP-dependent DNA helicase RecG low > 103
Ralstonia solanacearum IBSBF1503 0.17 RALBFv3_RS03155 adenosine deaminase 0.44 RALBFv3_RS05675 DNA helicase RecG low > 76
Sinorhizobium meliloti 1021 0.17 SMc04120 adenosine deaminase 0.33 SMc00228 ATP-dependent DNA helicase RecG low > 103
Ralstonia solanacearum UW163 0.17 UW163_RS10570 adenosine deaminase 0.44 UW163_RS07950 DNA helicase RecG — —
Ralstonia sp. UNC404CL21Col 0.17 ABZR87_RS15055 adenosine deaminase 0.44 ABZR87_RS01270 ATP-dependent DNA helicase RecG low > 80
Ralstonia solanacearum GMI1000 0.17 RS_RS10525 adenosine deaminase 0.45 RS_RS13565 DNA helicase RecG — —
Dinoroseobacter shibae DFL-12 0.17 Dshi_0830 Adenosine deaminase (EC 3.5.4.4) (from data) 0.32 Dshi_1510 DEAD/DEAH box helicase domain protein (RefSeq) low > 64
Ralstonia solanacearum PSI07 0.16 RPSI07_RS25245 adenosine deaminase 0.44 RPSI07_RS11625 DNA helicase RecG low > 81

Not shown: 0 genomes with orthologs for b1623 only; 29 genomes with orthologs for b3652 only