Conservation of cofitness between b0049 and b3389 in Escherichia coli BW25113

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0049 apaH diadenosinetetraphosphatase (NCBI) 1.0 b3389 aroB 3-dehydroquinate synthase (NCBI) 0.60 2
Escherichia coli BL21 1.00 ECD_00053 diadenosine tetraphosphatase 1.00 ECD_03241 3-dehydroquinate synthase low > 60
Escherichia coli ECRC62 1.00 BNILDI_08415 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH 1.00 BNILDI_02615 aroB 3-dehydroquinate synthase
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03607 'Bis(5'-nucleosyl)-tetraphosphatase, symmetrical' transl_table=11 0.99 OHPLBJKB_00314 3-dehydroquinate synthase low > 73
Escherichia coli ECOR27 0.99 NOLOHH_03190 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH 1.00 NOLOHH_08905 aroB 3-dehydroquinate synthase low > 57
Escherichia coli ECOR38 0.99 HEPCGN_08835 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH 1.00 HEPCGN_15935 aroB 3-dehydroquinate synthase low > 85
Escherichia coli ECRC102 0.99 NIAGMN_08695 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH 0.99 NIAGMN_14885 aroB 3-dehydroquinate synthase
Escherichia coli ECRC101 0.99 MCAODC_01360 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH 0.99 MCAODC_07645 aroB 3-dehydroquinate synthase
Escherichia coli ECRC101 0.99 OKFHMN_10845 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH 0.99 OKFHMN_17115 aroB 3-dehydroquinate synthase
Escherichia coli ECRC98 0.99 JDDGAC_14440 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH 0.99 JDDGAC_20745 aroB 3-dehydroquinate synthase
Escherichia coli Nissle 1917 0.99 ECOLIN_RS00275 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH 0.99 ECOLIN_RS19360 3-dehydroquinate synthase low > 52
Escherichia fergusonii Becca 0.99 EFB2_03994 Bis(5'-nucleosyl)-tetraphosphatase [symmetrical] 1.00 EFB2_00439 3-dehydroquinate synthase low > 86
Escherichia coli ECRC99 0.98 KEDOAH_17310 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH 0.99 KEDOAH_11025 aroB 3-dehydroquinate synthase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF192 'Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41)' transl_table=11 0.86 GFF630 3-dehydroquinate synthase (EC 4.2.3.4) 0.79 13
Enterobacter asburiae PDN3 0.91 EX28DRAFT_3643 Bis(5'nucleosyl)-tetraphosphatase, ApaH 0.88 EX28DRAFT_4153 3-dehydroquinate synthase (EC 4.2.3.4) low > 76
Enterobacter sp. TBS_079 0.89 MPMX20_00745 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical 0.89 MPMX20_04278 3-dehydroquinate synthase 0.50 23
Klebsiella michiganensis M5al 0.89 BWI76_RS04510 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 0.85 BWI76_RS26085 3-dehydroquinate synthase 0.35 24
Pantoea sp. MT58 0.82 IAI47_16095 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH 0.84 IAI47_01895 3-dehydroquinate synthase
Rahnella sp. WP5 0.79 EX31_RS03790 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 0.84 EX31_RS04720 3-dehydroquinate synthase
Dickeya dadantii 3937 0.79 DDA3937_RS18275 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH 0.81 DDA3937_RS19545 3-dehydroquinate synthase
Serratia liquefaciens MT49 0.79 IAI46_03235 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH 0.81 IAI46_23700 3-dehydroquinate synthase low > 86
Dickeya dianthicola ME23 0.79 DZA65_RS19350 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 0.80 DZA65_RS20760 3-dehydroquinate synthase
Dickeya dianthicola 67-19 0.79 HGI48_RS18210 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH 0.80 HGI48_RS19675 3-dehydroquinate synthase
Erwinia tracheiphila SCR3 0.76 LU632_RS02740 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH 0.82 LU632_RS22865 aroB 3-dehydroquinate synthase
Pectobacterium carotovorum WPP14 0.76 HER17_RS02950 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH 0.79 HER17_RS01780 3-dehydroquinate synthase 0.48 67
Vibrio cholerae E7946 ATCC 55056 0.53 CSW01_02315 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 0.63 CSW01_13300 3-dehydroquinate synthase low > 62
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS27475 symmetrical bis(5'-nucleosyl)-tetraphosphatase 0.55 PFLU_RS02030 3-dehydroquinate synthase
Pseudomonas fluorescens SBW25 0.47 PFLU_RS27475 symmetrical bis(5'-nucleosyl)-tetraphosphatase 0.55 PFLU_RS02030 3-dehydroquinate synthase
Pseudomonas simiae WCS417 0.47 PS417_25820 diadenosine tetraphosphatase 0.55 PS417_01985 3-dehydroquinate synthase
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_1198 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) 0.55 PfGW456L13_275 3-dehydroquinate synthase (EC 4.2.3.4) low > 87
Pseudomonas sp. RS175 0.46 PFR28_04066 'Bis(5'-nucleosyl)-tetraphosphatase, symmetrical' transl_table=11 0.54 PFR28_05013 3-dehydroquinate synthase
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_2526 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) 0.55 Pf1N1B4_1537 3-dehydroquinate synthase (EC 4.2.3.4)
Pseudomonas sp. S08-1 0.46 OH686_15030 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 0.54 OH686_10015 3-dehydroquinate synthase
Pseudomonas stutzeri RCH2 0.46 Psest_3670 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 0.53 Psest_3713 3-dehydroquinate synthase
Pseudomonas putida KT2440 0.46 PP_0399 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical 0.55 PP_5078 3-dehydroquinate synthase
Marinobacter adhaerens HP15 0.45 HP15_3277 diadenosine tetraphosphatase 0.53 HP15_480 3-dehydroquinate synthase
Shewanella sp. ANA-3 0.45 Shewana3_3211 apaH diadenosine tetraphosphatase (RefSeq) 0.61 Shewana3_3893 aroB 3-dehydroquinate synthase (RefSeq) low > 73
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_4803 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) 0.55 Pf6N2E2_3754 3-dehydroquinate synthase (EC 4.2.3.4)
Shewanella oneidensis MR-1 0.45 SO3641 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) (NCBI ptt file) 0.61 SO0287 aroB 3-dehydroquinate synthase (NCBI ptt file) low > 76
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_14325 diadenosine tetraphosphatase 0.55 AO356_09385 3-dehydroquinate synthase
Shewanella loihica PV-4 0.45 Shew_0877 apaH diadenosine tetraphosphatase (RefSeq) 0.60 Shew_0214 3-dehydroquinate synthase (RefSeq) low > 60
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_07325 diadenosine tetraphosphatase 0.54 AO353_12505 3-dehydroquinate synthase
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_4629 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 0.54 Psyr_0409 3-dehydroquinate synthase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_4629 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 0.54 Psyr_0409 3-dehydroquinate synthase
Kangiella aquimarina DSM 16071 0.44 B158DRAFT_0583 Bis(5'nucleosyl)-tetraphosphatase, ApaH 0.44 B158DRAFT_0764 3-dehydroquinate synthase (EC 4.2.3.4) low > 40
Shewanella amazonensis SB2B 0.44 Sama_2821 apaH diadenosine tetraphosphatase (RefSeq) 0.62 Sama_3367 3-dehydroquinate synthase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.42 MIT1002_00779 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical 0.60 MIT1002_00447 3-dehydroquinate synthase
Dechlorosoma suillum PS 0.41 Dsui_0399 symmetrical bis(5'-nucleosyl)-tetraphosphatase 0.53 Dsui_1095 3-dehydroquinate synthase
Acinetobacter radioresistens SK82 0.40 MPMX26_00597 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical 0.50 MPMX26_02810 3-dehydroquinate synthase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF223 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) 0.50 GFF1331 3-dehydroquinate synthase (EC 4.2.3.4) low > 90
Rhodanobacter denitrificans FW104-10B01 0.39 LRK54_RS12295 symmetrical bis(5'-nucleosyl)-tetraphosphatase 0.41 LRK54_RS04310 3-dehydroquinate synthase
Rhodanobacter denitrificans MT42 0.39 LRK55_RS12030 symmetrical bis(5'-nucleosyl)-tetraphosphatase 0.41 LRK55_RS04085 3-dehydroquinate synthase
Variovorax sp. SCN45 0.38 GFF1936 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) 0.49 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) low > 127
Lysobacter sp. OAE881 0.38 ABIE51_RS05375 symmetrical bis(5'-nucleosyl)-tetraphosphatase 0.41 ABIE51_RS16100 3-dehydroquinate synthase
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.4275.1 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) 0.41 Xcc-8004.1615.1 3-dehydroquinate synthase (EC 4.2.3.4) low > 74
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_11635 apaH symmetrical bis(5'-nucleosyl)-tetraphosphatase 0.42 OKGIIK_11185 aroB 3-dehydroquinate synthase
Dyella japonica UNC79MFTsu3.2 0.38 ABZR86_RS11280 symmetrical bis(5'-nucleosyl)-tetraphosphatase 0.42 ABZR86_RS10480 3-dehydroquinate synthase low > 74
Acidovorax sp. GW101-3H11 0.37 Ac3H11_1136 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) 0.50 Ac3H11_4705 3-dehydroquinate synthase (EC 4.2.3.4) low > 79
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS15845 biotin transporter BioY 0.52 RR42_RS19005 3-dehydroquinate synthase 0.52 5
Variovorax sp. OAS795 0.37 ABID97_RS21950 symmetrical bis(5'-nucleosyl)-tetraphosphatase 0.53 ABID97_RS23255 3-dehydroquinate synthase
Castellaniella sp019104865 MT123 0.35 ABCV34_RS10715 symmetrical bis(5'-nucleosyl)-tetraphosphatase 0.46 ABCV34_RS12705 3-dehydroquinate synthase
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS04255 diadenosine tetraphosphatase 0.52 BPHYT_RS17885 3-dehydroquinate synthase low > 109
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS25765 symmetrical bis(5'-nucleosyl)-tetraphosphatase 0.51 QEN71_RS28035 3-dehydroquinate synthase low > 153
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS08640 symmetrical bis(5'-nucleosyl)-tetraphosphatase 0.50 ABZR87_RS02590 3-dehydroquinate synthase low > 80
Ralstonia solanacearum GMI1000 0.33 RS_RS03425 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 0.51 RS_RS14880 3-dehydroquinate synthase
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_04820 Bis(5'nucleosyl)-tetraphosphatase, ApaH 0.51 H281DRAFT_05615 3-dehydroquinate synthase
Ralstonia solanacearum UW163 0.33 UW163_RS00925 symmetrical bis(5'-nucleosyl)-tetraphosphatase 0.50 UW163_RS06680 3-dehydroquinate synthase
Ralstonia solanacearum PSI07 0.33 RPSI07_RS20620 symmetrical bis(5'-nucleosyl)-tetraphosphatase 0.50 RPSI07_RS10300 3-dehydroquinate synthase
Ralstonia solanacearum IBSBF1503 0.33 RALBFv3_RS12640 symmetrical bis(5'-nucleosyl)-tetraphosphatase 0.50 RALBFv3_RS06935 3-dehydroquinate synthase

Not shown: 1 genomes with orthologs for b0049 only; 21 genomes with orthologs for b3389 only