Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Rhodospirillum rubrum S1H | 1.0 | Rru_A2319 | | 2-methylcitrate synthase/citrate synthase II (NCBI) | 1.0 | Rru_A0148 | | GTP-binding protein TypA (NCBI) | 0.49 | 18 |
Variovorax sp. OAS795 | 0.77 | ABID97_RS19380 | | 2-methylcitrate synthase | 0.49 | ABID97_RS16470 | | translational GTPase TypA | low | > 91 |
Herbaspirillum seropedicae SmR1 | 0.77 | HSERO_RS15655 | | methylcitrate synthase | 0.52 | HSERO_RS17980 | | GTP-binding protein | low | > 78 |
Acidovorax sp. GW101-3H11 | 0.77 | Ac3H11_2322 | | 2-methylcitrate synthase (EC 2.3.3.5) | 0.49 | Ac3H11_2864 | | GTP-binding protein TypA/BipA | — | — |
Variovorax sp. SCN45 | 0.76 | GFF271 | | 2-methylcitrate synthase (EC 2.3.3.5) | 0.49 | GFF219 | | GTP-binding protein TypA/BipA | low | > 127 |
Castellaniella sp019104865 MT123 | 0.76 | ABCV34_RS01665 | | 2-methylcitrate synthase | 0.51 | ABCV34_RS02140 | | translational GTPase TypA | — | — |
Ralstonia sp. UNC404CL21Col | 0.75 | ABZR87_RS16740 | | 2-methylcitrate synthase | 0.52 | ABZR87_RS11245 | | translational GTPase TypA | low | > 80 |
Paraburkholderia sabiae LMG 24235 | 0.75 | QEN71_RS31065 | | 2-methylcitrate synthase | 0.52 | QEN71_RS23065 | | translational GTPase TypA | — | — |
Ralstonia solanacearum UW163 | 0.75 | UW163_RS23445 | | 2-methylcitrate synthase | 0.52 | UW163_RS13160 | | translational GTPase TypA | — | — |
Ralstonia solanacearum IBSBF1503 | 0.75 | RALBFv3_RS22825 | | 2-methylcitrate synthase | 0.52 | RALBFv3_RS15715 | | translational GTPase TypA | — | — |
Ralstonia solanacearum GMI1000 | 0.75 | RS_RS17735 | | 2-methylcitrate synthase | 0.52 | RS_RS06495 | | translational GTPase TypA | — | — |
Cupriavidus basilensis FW507-4G11 | 0.75 | RR42_RS14475 | | methylcitrate synthase | 0.52 | RR42_RS12810 | | GTP-binding protein | — | — |
Burkholderia phytofirmans PsJN | 0.74 | BPHYT_RS33965 | | methylcitrate synthase | 0.52 | BPHYT_RS08105 | | GTP-binding protein | — | — |
Ralstonia solanacearum PSI07 | 0.74 | RPSI07_RS00395 | | 2-methylcitrate synthase | 0.52 | RPSI07_RS17640 | | translational GTPase TypA | low | > 81 |
Paraburkholderia graminis OAS925 | 0.74 | ABIE53_004761 | | 2-methylcitrate synthase | 0.52 | ABIE53_002454 | | GTP-binding protein | — | — |
Xanthomonas campestris pv. campestris strain 8004 | 0.73 | Xcc-8004.3980.1 | | 2-methylcitrate synthase (EC 2.3.3.5) | 0.50 | Xcc-8004.4106.1 | | GTP-binding protein TypA/BipA | — | — |
Pseudomonas sp. S08-1 | 0.73 | OH686_01685 | | 2-methylcitrate synthase | 0.50 | OH686_10610 | | GTP-binding protein TypA/BipA | low | > 80 |
Azospirillum brasilense Sp245 | 0.73 | AZOBR_RS24300 | | methylcitrate synthase | 0.75 | AZOBR_RS09920 | | GTP-binding protein TypA | — | — |
Escherichia coli ECRC100 | 0.70 | OKFHMN_08895 | prpC | 2-methylcitrate synthase | 0.52 | OKFHMN_14090 | typA | ribosome-dependent GTPase TypA | low | > 80 |
Escherichia coli ECRC62 | 0.70 | BNILDI_23185 | prpC | 2-methylcitrate synthase | 0.52 | BNILDI_05310 | typA | ribosome-dependent GTPase TypA | low | > 75 |
Escherichia coli ECRC98 | 0.70 | JDDGAC_12550 | prpC | 2-methylcitrate synthase | 0.52 | JDDGAC_17715 | typA | ribosome-dependent GTPase TypA | low | > 86 |
Escherichia coli ECRC99 | 0.70 | KEDOAH_19070 | prpC | 2-methylcitrate synthase | 0.52 | KEDOAH_14060 | typA | ribosome-dependent GTPase TypA | — | — |
Escherichia coli ECRC102 | 0.70 | NIAGMN_06950 | prpC | 2-methylcitrate synthase | 0.52 | NIAGMN_11845 | typA | ribosome-dependent GTPase TypA | — | — |
Escherichia coli ECRC101 | 0.70 | MCAODC_28125 | prpC | 2-methylcitrate synthase | 0.52 | MCAODC_04590 | typA | ribosome-dependent GTPase TypA | low | > 87 |
Escherichia coli ECOR27 | 0.70 | NOLOHH_01770 | prpC | 2-methylcitrate synthase | 0.52 | NOLOHH_06220 | typA | ribosome-dependent GTPase TypA | low | > 75 |
Escherichia coli ECOR38 | 0.70 | HEPCGN_07480 | prpC | 2-methylcitrate synthase | 0.52 | HEPCGN_12720 | typA | ribosome-dependent GTPase TypA | low | > 87 |
Escherichia fergusonii Becca | 0.70 | EFB2_03705 | | 2-methylcitrate synthase | 0.52 | EFB2_04745 | | GTP-binding protein TypA/BipA | low | > 86 |
Escherichia coli Nissle 1917 | 0.70 | ECOLIN_RS02155 | | 2-methylcitrate synthase | 0.52 | ECOLIN_RS22315 | | ribosome-dependent GTPase TypA | low | > 55 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.70 | OHPLBJKB_03338 | | 2-methylcitrate synthase | 0.52 | OHPLBJKB_04181 | | GTP-binding protein TypA/BipA | low | > 73 |
Escherichia coli BL21 | 0.70 | ECD_00287 | | 2-methylcitrate synthase | 0.52 | ECD_03756 | | GTP-binding protein | low | > 61 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.70 | GFF4264 | | 2-methylcitrate synthase (EC 2.3.3.5) | 0.52 | GFF2223 | | GTP-binding protein TypA/BipA | low | > 78 |
Escherichia coli BW25113 | 0.70 | b0333 | prpC | 2-methylcitrate synthase (NCBI) | 0.52 | b3871 | bipA | GTP-binding protein (NCBI) | low | > 76 |
Kangiella aquimarina DSM 16071 | 0.70 | B158DRAFT_1344 | | 2-methylcitrate synthase (EC 2.3.3.5) | 0.52 | B158DRAFT_0725 | | GTP-binding protein TypA/BipA | low | > 40 |
Dyella japonica UNC79MFTsu3.2 | 0.67 | ABZR86_RS08475 | | 2-methylcitrate synthase | 0.50 | ABZR86_RS20640 | | translational GTPase TypA | low | > 74 |
Rhodanobacter sp. FW510-T8 | 0.67 | OKGIIK_06570 | | Citrate synthase | 0.49 | OKGIIK_06470 | typA | translational GTPase TypA | — | — |
Rhodanobacter denitrificans MT42 | 0.67 | LRK55_RS00465 | | 2-methylcitrate synthase | 0.50 | LRK55_RS00550 | | translational GTPase TypA | low | > 63 |
Rhodanobacter denitrificans FW104-10B01 | 0.67 | LRK54_RS00690 | | 2-methylcitrate synthase | 0.50 | LRK54_RS00775 | | translational GTPase TypA | low | > 59 |
Lysobacter sp. OAE881 | 0.66 | ABIE51_RS06020 | | 2-methylcitrate synthase | 0.51 | ABIE51_RS05990 | | translational GTPase TypA | low | > 62 |
Pseudomonas stutzeri RCH2 | 0.53 | Psest_2320 | | 2-methylcitrate synthase/citrate synthase II | 0.50 | Psest_3926 | | GTP-binding protein TypA/BipA | low | > 67 |
Pseudomonas putida KT2440 | 0.53 | PP_2335 | | methylcitrate synthase | 0.51 | PP_5044 | | ribosome associated GTPase | — | — |
Acinetobacter radioresistens SK82 | 0.53 | MPMX26_01290 | | 2-methylcitrate synthase | 0.50 | MPMX26_02489 | | GTP-binding protein TypA/BipA | — | — |
Marinobacter adhaerens HP15 | 0.52 | HP15_1931 | | 2-methylcitrate synthase/citrate synthase II | 0.51 | HP15_429 | | GTP-binding protein TypA | low | > 73 |
Pseudomonas simiae WCS417 | 0.52 | PS417_21075 | | methylcitrate synthase | 0.50 | PS417_01665 | | GTP-binding protein TypA | — | — |
Pseudomonas fluorescens FW300-N2E2 | 0.52 | Pf6N2E2_6062 | | 2-methylcitrate synthase (EC 2.3.3.5) (from data) | 0.50 | Pf6N2E2_3818 | | GTP-binding protein TypA/BipA | — | — |
Pseudomonas fluorescens SBW25 | 0.52 | PFLU_RS22685 | | 2-methylcitrate synthase | 0.50 | PFLU_RS01720 | | translational GTPase TypA | — | — |
Pseudomonas fluorescens SBW25-INTG | 0.52 | PFLU_RS22685 | | 2-methylcitrate synthase | 0.50 | PFLU_RS01720 | | translational GTPase TypA | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.51 | AO356_20870 | | 2-methylcitrate synthase | 0.50 | AO356_09695 | | GTP-binding protein TypA | — | — |
Pseudomonas fluorescens GW456-L13 | 0.51 | PfGW456L13_4117 | | 2-methylcitrate synthase (EC 2.3.3.5) | 0.50 | PfGW456L13_340 | | GTP-binding protein TypA/BipA | — | — |
Pseudomonas sp. RS175 | 0.51 | PFR28_02927 | | 2-methylcitrate synthase | 0.51 | PFR28_04951 | | GTP-binding protein TypA/BipA | — | — |
Pseudomonas fluorescens FW300-N1B4 | 0.51 | Pf1N1B4_3820 | | 2-methylcitrate synthase (EC 2.3.3.5) | 0.38 | Pf1N1B4_1601 | | GTP-binding protein TypA/BipA | — | — |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.51 | Psyr_2086 | | 2-methylcitrate synthase | 0.50 | Psyr_4815 | | Small GTP-binding protein domain:GTP-binding protein TypA | — | — |
Pseudomonas syringae pv. syringae B728a | 0.51 | Psyr_2086 | | 2-methylcitrate synthase | 0.50 | Psyr_4815 | | Small GTP-binding protein domain:GTP-binding protein TypA | — | — |
Alteromonas macleodii MIT1002 | 0.51 | MIT1002_03130 | | 2-methylcitrate synthase | 0.52 | MIT1002_03181 | | hypothetical protein | low | > 70 |
Pseudomonas fluorescens FW300-N2E3 | 0.50 | AO353_00895 | | 2-methylcitrate synthase | 0.51 | AO353_12180 | | GTP-binding protein TypA | — | — |
Shewanella amazonensis SB2B | 0.50 | Sama_3295 | | methylcitrate synthase (RefSeq) | 0.51 | Sama_3415 | | virulence regulator BipA (RefSeq) | low | > 62 |
Shewanella loihica PV-4 | 0.50 | Shew_1821 | | 2-methylcitrate synthase/citrate synthase II (RefSeq) | 0.52 | Shew_3553 | | GTP-binding protein TypA (RefSeq) | low | > 60 |
Shewanella oneidensis MR-1 | 0.49 | SO0344 | prpC | 2-methylcitrate synthase (EC 2.3.3.5) (from data) | 0.51 | SO4408 | bipA | virulence regulator BipA (NCBI ptt file) | low | > 76 |
Shewanella sp. ANA-3 | 0.49 | Shewana3_3826 | | methylcitrate synthase (RefSeq) | 0.51 | Shewana3_0301 | | GTP-binding protein TypA (RefSeq) | low | > 73 |
Vibrio cholerae E7946 ATCC 55056 | 0.49 | CSW01_06740 | | 2-methylcitrate synthase | 0.53 | CSW01_13840 | | translational GTPase TypA | low | > 62 |
Mycobacterium tuberculosis H37Rv | 0.29 | Rv1131 | | Probable methylcitrate synthase PrpC | 0.41 | Rv1165 | | Possible GTP-binding translation elongation factor TypA (tyrosine phosphorylated protein A) (GTP-binding protein) | low | > 58 |
Phaeobacter inhibens DSM 17395 | 0.25 | PGA1_c28860 | | citrate synthase GltA | 0.65 | PGA1_c15300 | | GTP-binding protein TypA | low | > 62 |