Homologs of Xcc-8004.4513.1 from Xanthomonas campestris pv. campestris strain 8004

O-antigen export system permease protein RfbD
SEED: O-antigen export system permease protein RfbD
KEGG: lipopolysaccharide transport system permease protein

72 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4513.1 O-antigen export system permease protein RfbD no data 100 100
o Pseudomonas syringae pv. syringae B728a Psyr_0917 ABC-2 strong 54 91
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0917 ABC-2 strong 54 91
o Pseudomonas putida KT2440 PP_1778 Lipopolysaccharide ABC export system, permease protein strong 54 90
o Azospirillum brasilense Sp245 AZOBR_RS33925 ABC transporter strong 52 90
o Rhodanobacter sp. FW510-T8 OKGIIK_01190 Transport permease protein cofit 54 90
o Pseudomonas fluorescens FW300-N2E3 AO353_10255 ABC transporter sig. 40 91
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01668 hypothetical protein strong 36 90
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1963 O-antigen export system permease protein RfbD sig. 41 91
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2336 O-antigen export system permease protein RfbD sig. 39 90
o Pseudomonas fluorescens FW300-N2C3 AO356_11825 ABC transporter strong 40 91
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4240 O-antigen export system permease protein RfbD insig. 40 91
o Pseudomonas sp. S08-1 OH686_11970 O-antigen export system permease protein RfbD strong 41 89
o Pseudomonas sp. RS175 PFR28_04556 hypothetical protein sig. 42 91
o Magnetospirillum magneticum AMB-1 AMB_RS05435 ABC transporter permease cofit 29 84
o Paraburkholderia graminis OAS925 ABIE53_001154 lipopolysaccharide transport system permease protein strong 27 89
o Desulfovibrio vulgaris Hildenborough JW710 DVUA0077 ABC transporter, permease protein (TIGR) no data 29 91
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04827 lipopolysaccharide transport system permease protein no data 24 91
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_209 O-antigen export system permease protein RfbD insig. 29 94
o Acidovorax sp. GW101-3H11 Ac3H11_1901 ABC transporter permease protein no data 31 88
  Pseudomonas fluorescens FW300-N2C3 AO356_00760 sugar ABC transporter permease insig. 30 94
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_337 O-antigen export system permease protein RfbD strong 27 90
o Bosea sp. OAE506 ABIE41_RS03025 ABC transporter permease no data 28 89
o Paraburkholderia sabiae LMG 24235 QEN71_RS25730 ABC transporter permease strong 23 95
o Phocaeicola dorei CL03T12C01 ABI39_RS13680 ABC transporter permease insig. 27 90
o Desulfovibrio vulgaris Miyazaki F DvMF_2701 ABC-2 type transporter (RefSeq) no data 27 92
  Pseudomonas syringae pv. syringae B728a Psyr_0610 ABC-2 insig. 27 87
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0610 ABC-2 insig. 27 87
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS05655 ABC transporter permease cofit 27 84
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS18750 ABC transporter permease no data 24 93
o Pseudomonas simiae WCS417 PS417_20640 sugar ABC transporter permease no data 26 96
  Pseudomonas fluorescens FW300-N2E3 AO353_02005 hypothetical protein insig. 30 81
o Klebsiella michiganensis M5al BWI76_RS18990 ABC transporter permease cofit 28 84
o Rahnella sp. WP5 EX31_RS11480 ABC transporter permease cofit 25 87
  Paraburkholderia graminis OAS925 ABIE53_001145 lipopolysaccharide transport system permease protein strong 25 87
  Rhodanobacter denitrificans MT42 LRK55_RS05405 ABC transporter permease strong 25 74
o Burkholderia phytofirmans PsJN BPHYT_RS21440 sugar ABC transporter permease insig. 25 88
  Serratia liquefaciens MT49 IAI46_08125 ABC transporter permease no data 26 72
  Synechococcus elongatus PCC 7942 Synpcc7942_1126 ABC transporter permease protein strong 33 72
o Pantoea sp. MT58 IAI47_07010 ABC transporter permease cofit 25 91
o Azospirillum sp. SherDot2 MPMX19_06721 hypothetical protein no data 27 89
  Burkholderia phytofirmans PsJN BPHYT_RS04295 ABC transporter insig. 30 78
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17700 ABC transporter permease strong 29 75
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS01800 ABC transporter permease cofit 25 90
o Lysobacter sp. OAE881 ABIE51_RS04300 ABC transporter permease no data 27 83
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1845 O-antigen export system, permease protein strong 29 84
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS06735 ABC transporter permease strong 25 90
  Phocaeicola dorei CL03T12C01 ABI39_RS20530 ABC transporter permease insig. 25 90
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2592 ABC-type polysaccharide/polyol phosphate export systems, permease component insig. 23 93
o Castellaniella sp019104865 MT123 ABCV34_RS12950 ABC transporter permease insig. 25 92
  Rhodospirillum rubrum S1H Rru_B0027 ABC-2 (NCBI) no data 25 79
o Bifidobacterium breve UCC2003 BBR_RS19765 ABC transporter permease no data 25 90
  Caulobacter crescentus NA1000 CCNA_00671 ABC-type polysaccharide/polyol phosphate export system, permease component no data 28 79
  Caulobacter crescentus NA1000 Δfur CCNA_00671 ABC-type polysaccharide/polyol phosphate export system, permease component cofit 28 79
  Azospirillum brasilense Sp245 AZOBR_RS33470 sugar ABC transporter permease strong 27 74
o Vibrio cholerae E7946 ATCC 55056 CSW01_01295 ABC transporter permease strong 23 83
o Dickeya dadantii 3937 DDA3937_RS18670 ABC transporter permease strong 22 82
o Variovorax sp. OAS795 ABID97_RS05720 ABC transporter permease no data 27 81
  Pseudomonas sp. S08-1 OH686_00520 hypothetical protein insig. 23 70
o Dickeya dianthicola 67-19 HGI48_RS18600 ABC transporter permease strong 21 82
  Mycobacterium tuberculosis H37Rv Rv3783 Probable O-antigen/lipopolysaccharide transport integral membrane protein ABC transporter RfbD no data 25 69
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4626 O-antigen export system permease protein RfbD no data 21 73
  Erwinia tracheiphila SCR3 LU632_RS08880 ABC transporter permease cofit 23 78
  Escherichia coli Nissle 1917 ECOLIN_RS17035 ABC transporter permease no data 20 84
  Escherichia fergusonii Becca EFB2_00855 Polysialic acid transport protein KpsM insig. 20 84
  Escherichia coli BL21 ECD_02828 Polysialic acid transport protein kpsM cofit 20 84
  Burkholderia phytofirmans PsJN BPHYT_RS33205 ABC transporter no data 22 68
  Rahnella sp. WP5 EX31_RS18920 ABC transporter permease insig. 18 84
  Variovorax sp. SCN45 GFF4630 O-antigen export system permease protein RfbD no data 29 81
  Dickeya dianthicola ME23 DZA65_RS19735 ABC transporter permease strong 21 82
  Escherichia coli ECOR38 HEPCGN_18100 kpsM Polysialic acid transport protein strong 20 84
  Dinoroseobacter shibae DFL-12 Dshi_4148 ABC-2 type transporter (RefSeq) strong 23 89