| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Sinorhizobium meliloti 1021 | SM_b21158 | | transcriptional regulator | sig. | 100 | 100 |
| o | Rhizobium sp. OAE497 | ABIE40_RS21410 | | MurR/RpiR family transcriptional regulator | insig. | 81 | 100 |
| o | Agrobacterium fabrum C58 | Atu2598 | | transcriptional regulator, RpiR family | strong | 68 | 100 |
| o | Serratia liquefaciens MT49 | IAI46_02300 | | MurR/RpiR family transcriptional regulator | insig. | 38 | 100 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_12185 | | MurR/RpiR family transcriptional regulator | insig. | 36 | 100 |
| o | Klebsiella michiganensis M5al | BWI76_RS03915 | | MurR/RpiR family transcriptional regulator | insig. | 36 | 100 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_0416 | | transcriptional regulator, RpiR family | insig. | 37 | 100 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0416 | | transcriptional regulator, RpiR family | insig. | 37 | 100 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_5134 | | Transcriptional regulator, RpiR family | insig. | 36 | 100 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS28850 | | transcriptional regulator | insig. | 36 | 100 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS19110 | | MurR/RpiR family transcriptional regulator | sig. | 36 | 100 |
| o | Pseudomonas sp. DMC3 | GFF4937 | | HTH-type transcriptional regulator HexR | insig. | 36 | 100 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS08725 | | transcriptional regulator | sig. | 37 | 100 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS03120 | | transcriptional regulator | insig. | 36 | 100 |
| | Pectobacterium carotovorum WPP14 | HER17_RS11785 | | MurR/RpiR family transcriptional regulator | cofit | 34 | 100 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01892 | | transcriptional regulator, RpiR family | insig. | 37 | 100 |
| o | Paraburkholderia graminis OAS925 | ABIE53_000756 | | RpiR family carbohydrate utilization transcriptional regulator | sig. | 37 | 100 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS01955 | | MurR/RpiR family transcriptional regulator | cofit | 36 | 100 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3440 | | Transcriptional regulator, RpiR family | sig. | 34 | 100 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_05895 | | RpiR family transcriptional regulator | insig. | 35 | 100 |
| o | Pseudomonas sp. RS175 | PFR28_00029 | | HTH-type transcriptional regulator HexR | insig. | 35 | 100 |
| o | Ralstonia solanacearum GMI1000 | RS_RS22855 | | MurR/RpiR family transcriptional regulator | insig. | 36 | 100 |
| o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS18180 | | MurR/RpiR family transcriptional regulator | insig. | 35 | 100 |
| o | Ralstonia solanacearum UW163 | UW163_RS20950 | | MurR/RpiR family transcriptional regulator | insig. | 35 | 100 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_07785 | | RpiR family transcriptional regulator | insig. | 34 | 100 |
| o | Ralstonia solanacearum PSI07 | RPSI07_RS05455 | | MurR/RpiR family transcriptional regulator | insig. | 36 | 100 |
| | Escherichia fergusonii Becca | EFB2_02089 | | HTH-type transcriptional regulator HexR | insig. | 34 | 100 |
| | Escherichia coli ECOR27 | NOLOHH_16840 | hexR | DNA-binding transcriptional regulator HexR | insig. | 34 | 100 |
| | Escherichia coli ECOR38 | HEPCGN_04730 | hexR | DNA-binding transcriptional regulator HexR | insig. | 34 | 100 |
| | Escherichia coli ECRC100 | OKFHMN_26325 | hexR | DNA-binding transcriptional regulator HexR | cofit | 34 | 100 |
| | Escherichia coli ECRC101 | MCAODC_19080 | hexR | DNA-binding transcriptional regulator HexR | sig. | 34 | 100 |
| | Escherichia coli ECRC102 | NIAGMN_01735 | hexR | DNA-binding transcriptional regulator HexR | insig. | 34 | 100 |
| | Escherichia coli ECRC62 | BNILDI_15635 | hexR | DNA-binding transcriptional regulator HexR | insig. | 34 | 100 |
| | Escherichia coli ECRC98 | JDDGAC_00900 | hexR | DNA-binding transcriptional regulator HexR | insig. | 34 | 100 |
| | Escherichia coli ECRC99 | KEDOAH_01780 | hexR | DNA-binding transcriptional regulator HexR | no data | 34 | 100 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS10325 | | DNA-binding transcriptional regulator HexR | cofit | 34 | 100 |
| o | Pseudomonas orientalis W4I3 | QF045_RS25860 | | MurR/RpiR family transcriptional regulator | insig. | 35 | 100 |
| | Dickeya dadantii 3937 | DDA3937_RS10130 | | MurR/RpiR family transcriptional regulator | cofit | 35 | 95 |
| | Escherichia coli BL21 | ECD_01824 | | putative DNA-binding transcriptional regulator | cofit | 34 | 100 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01875 | | HTH-type transcriptional regulator HexR | insig. | 34 | 100 |
| | Escherichia coli BW25113 | b1853 | yebK | predicted DNA-binding transcriptional regulator (NCBI) | strong | 34 | 100 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_25375 | | transcriptional regulator HexR | insig. | 35 | 95 |
| | Shewanella loihica PV-4 | Shew_2049 | | DNA-binding transcriptional regulator HexR (RefSeq) | strong | 33 | 95 |
| | Shewanella amazonensis SB2B | Sama_1813 | | DNA-binding transcriptional regulator HexR (RefSeq) | strong | 33 | 98 |
| o | Pseudomonas simiae WCS417 | PS417_23600 | | RpiR family transcriptional regulator | insig. | 35 | 100 |
| | Rahnella sp. WP5 | EX31_RS10635 | | MurR/RpiR family transcriptional regulator | sig. | 35 | 95 |
| | Serratia liquefaciens MT49 | IAI46_14580 | | MurR/RpiR family transcriptional regulator | insig. | 34 | 95 |
| | Shewanella sp. ANA-3 | Shewana3_2152 | | DNA-binding transcriptional regulator HexR (RefSeq) | strong | 33 | 98 |
| | Shewanella oneidensis MR-1 | SO2490 | | transcriptional regulator, RpiR family (NCBI ptt file) | strong | 33 | 98 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS25475 | hexR;go_function=DNA-binding | transcriptional regulator HexR | sig. | 33 | 95 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_26230 | | transcriptional regulator | strong | 33 | 95 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS57925 | hexR;go_function=DNA-binding | transcriptional regulator HexR | strong | 33 | 95 |
| | Dickeya dianthicola 67-19 | HGI48_RS10160 | | MurR/RpiR family transcriptional regulator | cofit | 34 | 95 |
| | Dickeya dianthicola ME23 | DZA65_RS10575 | | MurR/RpiR family transcriptional regulator | insig. | 34 | 95 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS01015 | | MurR/RpiR family transcriptional regulator | strong | 34 | 96 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_16180 | | HTH-type transcriptional regulator HexR | strong | 34 | 96 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS34520 | | MurR/RpiR family transcriptional regulator | strong | 34 | 96 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_05825 | | transcriptional regulator HexR | cofit | 34 | 95 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04871 | | HTH-type transcriptional regulator HexR | cofit | 35 | 100 |
| | Klebsiella michiganensis M5al | BWI76_RS18110 | | transcriptional regulator HexR | sig. | 34 | 95 |
| | Pseudomonas stutzeri RCH2 | Psest_0851 | | Transcriptional regulators | strong | 34 | 99 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1632 | | Phosphogluconate repressor HexR, RpiR family | insig. | 34 | 99 |
| | Pseudomonas segetis P6 | ACVTMO_RS14030 | | MurR/RpiR family transcriptional regulator | sig. | 34 | 96 |
| | Pseudomonas putida KT2440 | PP_1021 | | DNA-binding transcriptional regulator | strong | 34 | 94 |
| | Paraburkholderia graminis OAS925 | ABIE53_004499 | | RpiR family carbohydrate utilization transcriptional regulator | sig. | 35 | 92 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_0703 | | transcriptional regulator, RpiR family | insig. | 34 | 99 |
| | Pseudomonas sp. S08-1 | OH686_02440 | | Phosphogluconate repressor HexR, RpiR family | strong | 33 | 97 |
| | Pseudomonas sp. BP01 | JOY50_RS11445 | hexR | DNA-binding transcriptional regulator HexR | insig. | 34 | 94 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS06120 | | transcriptional regulator | sig. | 36 | 91 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03750 | | transcriptional regulator, RpiR family | insig. | 34 | 92 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS25415 | | MurR/RpiR family transcriptional regulator | insig. | 34 | 100 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS25415 | | MurR/RpiR family transcriptional regulator | insig. | 34 | 100 |
| | Pseudomonas sp. SVBP6 | COO64_RS04585 | hexR | DNA-binding transcriptional regulator HexR | insig. | 34 | 97 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_03365 | | transcriptional regulator | strong | 34 | 96 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_2055 | | Probable transcriptional regulator | strong | 34 | 92 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS08655 | | SIS domain-containing protein | sig. | 36 | 93 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1364 | | Phosphogluconate repressor HexR, RpiR family | insig. | 36 | 85 |
| | Marinobacter adhaerens HP15 | HP15_2180 | | transcriptional regulator, RpiR family protein | strong | 35 | 95 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_05165 | | transcriptional regulator | strong | 34 | 96 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2886 | | Phosphogluconate repressor HexR, RpiR family | strong | 34 | 96 |
| | Enterobacter sp. TBS_079 | MPMX20_02758 | | HTH-type transcriptional regulator HexR | strong | 33 | 99 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_590 | | Phosphogluconate repressor HexR, RpiR family | strong | 33 | 96 |
| | Azospirillum brasilense Sp245 | AZOBR_RS30190 | | transcriptional regulator | insig. | 34 | 95 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1900 | | Phosphogluconate repressor HexR, RpiR family | sig. | 33 | 96 |
| | Pseudomonas sp. DMC3 | GFF5141 | | HTH-type transcriptional regulator HexR | cofit | 33 | 96 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1119 | | Helix-turn-helix protein RpiR:Sugar isomerase (SIS) | strong | 34 | 93 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1119 | | Helix-turn-helix protein RpiR:Sugar isomerase (SIS) | insig. | 34 | 93 |
| | Pseudomonas sp. RS175 | PFR28_00572 | | HTH-type transcriptional regulator HexR | strong | 33 | 96 |
| | Pseudomonas sp. S08-1 | OH686_13095 | | Transcriptional regulator, RpiR family | cofit | 32 | 95 |
| | Pseudomonas sp. RS175 | PFR28_04521 | | HTH-type transcriptional regulator HexR | strong | 31 | 95 |
| | Pseudomonas sp. BP01 | JOY50_RS08750 | hexR | transcriptional regulator HexR | cofit | 32 | 95 |
| | Pseudomonas sp. SVBP6 | COO64_RS01830 | hexR | transcriptional regulator HexR | cofit | 31 | 95 |
| | Pseudomonas simiae WCS417 | PS417_22115 | | transcriptional regulator | strong | 33 | 98 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS23730 | | MurR/RpiR family transcriptional regulator | strong | 33 | 98 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS23730 | | MurR/RpiR family transcriptional regulator | strong | 33 | 98 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04559 | | HTH-type transcriptional regulator HexR | cofit | 33 | 98 |
| | Pseudomonas orientalis W4I3 | QF045_RS24250 | | MurR/RpiR family transcriptional regulator | insig. | 33 | 98 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS35685 | | RpiR family transcriptional regulator | no data | 33 | 92 |
| | Sinorhizobium meliloti 1021 | SMc02460 | | hypothetical protein | strong | 33 | 89 |
| | Pseudomonas stutzeri RCH2 | Psest_4088 | | Transcriptional regulators | strong | 32 | 95 |