Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Cupriavidus basilensis FW507-4G11 | RR42_RS35955 | | Fis family transcriptional regulator | insig. | 100 | 100 |
o | Ralstonia solanacearum GMI1000 | RS_RS22325 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 70 | 100 |
o | Ralstonia solanacearum PSI07 | RPSI07_RS05015 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 70 | 100 |
o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS18540 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 68 | 100 |
o | Ralstonia solanacearum UW163 | UW163_RS20590 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 68 | 100 |
o | Ralstonia sp. UNC404CL21Col | ABZR87_RS19575 | | sigma-54-dependent Fis family transcriptional regulator | sig. | 68 | 100 |
o | Paraburkholderia graminis OAS925 | ABIE53_002431 | | DNA-binding NtrC family response regulator | insig. | 59 | 98 |
o | Burkholderia phytofirmans PsJN | BPHYT_RS08215 | | Fis family transcriptional regulator | insig. | 59 | 98 |
o | Variovorax sp. OAS795 | ABID97_RS24330 | | sigma 54-interacting transcriptional regulator | insig. | 54 | 98 |
o | Variovorax sp. SCN45 | GFF2200 | | sigma-54-dependent transcriptional regulator | insig. | 54 | 98 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS19020 | | sigma-54 dependent transcriptional regulator | insig. | 42 | 69 |
| Ralstonia solanacearum GMI1000 | RS_RS25105 | | sigma-54-dependent Fis family transcriptional regulator | cofit | 40 | 75 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU0118 | ntrC | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | insig. | 41 | 68 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS19345 | | sigma-54 dependent transcriptional regulator | no data | 42 | 68 |
| Bosea sp. OAE506 | ABIE41_RS10895 | | sigma-54 dependent transcriptional regulator | insig. | 40 | 73 |
| Alteromonas macleodii MIT1002 | MIT1002_01326 | | Quorum-sensing regulator protein F | insig. | 41 | 69 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1930 | | Transcriptional regulatory protein zraR | insig. | 41 | 69 |
| Ralstonia solanacearum PSI07 | RPSI07_RS07835 | | sigma-54-dependent Fis family transcriptional regulator | strong | 40 | 74 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS23315 | | sigma-54-dependent Fis family transcriptional regulator | strong | 39 | 74 |
| Ralstonia solanacearum UW163 | UW163_RS16565 | | sigma-54-dependent Fis family transcriptional regulator | strong | 39 | 74 |
| Dechlorosoma suillum PS | Dsui_3486 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | cofit | 42 | 69 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS23515 | | sigma-54 dependent transcriptional regulator | strong | 39 | 73 |
| Pseudomonas aeruginosa PA14 | IKLFDK_00790 | | two-component response regulator PilR | strong | 40 | 70 |
| Pseudomonas sp. BP01 | JOY50_RS27675 | | sigma-54 dependent transcriptional regulator | cofit | 38 | 72 |
| Azospirillum sp. SherDot2 | MPMX19_04512 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 40 | 69 |
| Marinobacter adhaerens HP15 | HP15_725 | | two component, sigma54 specific, transcriptional regulator, Fis family | strong | 39 | 68 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5156 | | Two-component sensor CbrB: intrcellular carbon:nitrogen balance | strong | 39 | 72 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_16075 | | Fis family transcriptional regulator | strong | 38 | 73 |
| Pseudomonas sp. SVBP6 | COO64_RS07975 | | sigma-54 dependent transcriptional regulator | insig. | 41 | 70 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS43250 | | sigma-54 dependent transcriptional regulator | insig. | 41 | 75 |
| Pseudomonas sp. RS175 | PFR28_03718 | | Transcriptional regulatory protein ZraR | strong | 39 | 70 |
| Pseudomonas lactucae CFBP13502 | GEMAOFIL_04930 | | Transcriptional regulatory protein ZraR | insig. | 39 | 70 |
| Pseudomonas simiae WCS417 | PS417_23895 | | Fis family transcriptional regulator | no data | 39 | 70 |
| Pseudomonas fluorescens SBW25 | PFLU_RS25735 | | sigma-54-dependent Fis family transcriptional regulator | strong | 38 | 70 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS25735 | | sigma-54-dependent Fis family transcriptional regulator | strong | 38 | 70 |
| Pseudomonas sp. S08-1 | OH686_13325 | | Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake | cofit | 40 | 68 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_14200 | | transcriptional regulator | insig. | 40 | 68 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_14400 | | Fis family transcriptional regulator | strong | 37 | 73 |
| Pseudomonas syringae pv. syringae B728a | Psyr_0831 | | Two-component response regulator CbrB | sig. | 38 | 76 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0831 | | Two-component response regulator CbrB | no data | 38 | 76 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5122 | | Type IV fimbriae expression regulatory protein PilR | insig. | 41 | 68 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2858 | | Two-component sensor CbrB: intrcellular carbon:nitrogen balance | strong | 39 | 70 |
| Pseudomonas simiae WCS417 | PS417_05525 | | Fis family transcriptional regulator | strong | 39 | 68 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS11070 | | sigma-54 dependent transcriptional regulator | cofit | 38 | 70 |
| Pseudomonas sp. DMC3 | GFF4030 | | Transcriptional regulatory protein ZraR | strong | 38 | 71 |
| Azospirillum sp. SherDot2 | MPMX19_06333 | | Regulatory protein AtoC | insig. | 40 | 70 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09510 | | sigma-54-dependent Fis family transcriptional regulator | sig. | 38 | 73 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1260 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | insig. | 39 | 68 |
| Pseudomonas fluorescens SBW25 | PFLU_RS05610 | | sigma-54-dependent Fis family transcriptional regulator | strong | 39 | 68 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS05610 | | sigma-54-dependent Fis family transcriptional regulator | strong | 39 | 68 |
| Acidovorax sp. GW101-3H11 | Ac3H11_4019 | | Sigma-54 dependent transcriptional regulator | sig. | 38 | 73 |
| Shewanella oneidensis MR-1 | SO3059 | | formate hydrogenlyase transcriptional activator, putative (NCBI ptt file) | insig. | 46 | 50 |
| Pseudomonas sp. S08-1 | OH686_16390 | | Type IV fimbriae expression regulatory protein PilR | cofit | 40 | 68 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS03980 | | Fis family transcriptional regulator | strong | 39 | 69 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS05020 | | sigma-54 dependent transcriptional regulator | strong | 39 | 71 |
| Escherichia coli ECOR38 | HEPCGN_21015 | hyfR | DNA-binding transcriptional activator HyfR | insig. | 38 | 70 |
| Paraburkholderia graminis OAS925 | ABIE53_001365 | | DNA-binding NtrC family response regulator | strong | 39 | 73 |
| Escherichia fergusonii Becca | EFB2_01635 | | Regulatory protein AtoC | insig. | 38 | 68 |
| Escherichia coli Nissle 1917 | ECOLIN_RS12965 | | acetoacetate metabolism transcriptional regulator AtoC | no data | 38 | 68 |
| Shewanella sp. ANA-3 | Shewana3_1488 | | sigma-54 dependent trancsriptional regulator (RefSeq) | insig. | 46 | 50 |
| Escherichia coli ECOR38 | HEPCGN_22430 | atoC | acetoacetate metabolism transcriptional regulator AtoC | insig. | 38 | 68 |
| Escherichia coli BL21 | ECD_02147 | | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein | insig. | 38 | 68 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01490 | | Regulatory protein AtoC | insig. | 38 | 68 |
| Escherichia coli BW25113 | b2220 | atoC | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein (NCBI) | insig. | 38 | 68 |
| Rhodanobacter sp000427505 FW510-R12 | LRK53_RS04990 | | sigma-54 dependent transcriptional regulator | cofit | 38 | 71 |
| Escherichia coli ECRC100 | OKFHMN_21850 | hyfR | DNA-binding transcriptional regulator HyfR | insig. | 37 | 75 |
| Escherichia coli ECRC101 | MCAODC_12380 | hyfR | DNA-binding transcriptional regulator HyfR | insig. | 37 | 75 |
| Escherichia coli ECRC102 | NIAGMN_19620 | hyfR | DNA-binding transcriptional regulator HyfR | insig. | 37 | 75 |
| Escherichia coli ECRC98 | JDDGAC_25795 | hyfR | DNA-binding transcriptional regulator HyfR | insig. | 37 | 75 |
| Escherichia coli ECRC99 | KEDOAH_06370 | hyfR | DNA-binding transcriptional regulator HyfR | no data | 37 | 75 |
| Pseudomonas aeruginosa PA14 | IKLFDK_27655 | | two-component system response regulator DctD | insig. | 42 | 71 |
| Pseudomonas sp. S08-1 | OH686_17260 | | Two-component sensor CbrB: intrcellular carbon:nitrogen balance | strong | 39 | 68 |
| Pseudomonas sp. SVBP6 | COO64_RS15090 | | sigma-54 dependent transcriptional regulator | strong | 38 | 71 |
| Xanthobacter sp. DMC5 | GFF2901 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 41 | 69 |
| Variovorax sp. SCN45 | GFF3669 | | Two-component system response regulator protein | no data | 39 | 75 |
| Escherichia coli BL21 | ECD_02383 | | hydrogenase-4 transcriptional activator | cofit | 38 | 70 |
| Pseudomonas putida KT2440 | PP_4696 | | Nitrogen regulation protein NR(I) | strong | 38 | 72 |
| Dickeya dianthicola 67-19 | HGI48_RS07265 | | formate hydrogenlyase transcriptional activator FlhA | insig. | 37 | 70 |
| Dickeya dianthicola ME23 | DZA65_RS07775 | | formate hydrogenlyase transcriptional activator FlhA | insig. | 37 | 70 |
| Rhodopseudomonas palustris CGA009 | TX73_007390 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 36 | 69 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00240 | | two component, sigma54 specific, transcriptional regulator, NtrC subfamily, Fis family | strong | 39 | 73 |
| Escherichia coli ECRC62 | BNILDI_12310 | hyfR | DNA-binding transcriptional regulator HyfR | insig. | 37 | 75 |
| Escherichia coli BW25113 | b2491 | hyfR | putative 2-component regulator, interaction with sigma 54 (VIMSS) | sig. | 37 | 75 |
| Acidovorax sp. GW101-3H11 | Ac3H11_4011 | | Putative sensory histidine kinase YfhA | sig. | 37 | 78 |
| Burkholderia phytofirmans PsJN | BPHYT_RS05575 | | Fis family transcriptional regulator | strong | 39 | 73 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_01730 | atoC | sigma-54-dependent Fis family transcriptional regulator | insig. | 38 | 71 |
| Pseudomonas sp. SVBP6 | COO64_RS00595 | | sigma-54 dependent transcriptional regulator | insig. | 41 | 68 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS24790 | | sigma-54 dependent transcriptional regulator | cofit | 41 | 68 |
| Variovorax sp. OAS795 | ABID97_RS06460 | | sigma 54-interacting transcriptional regulator | cofit | 40 | 64 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01235 | | DNA-binding transcriptional activator HyfR | cofit | 38 | 70 |
| Pseudomonas sp. BP01 | JOY50_RS26915 | | sigma-54-dependent Fis family transcriptional regulator | no data | 48 | 50 |
| Pseudomonas sp. S08-1 | OH686_06630 | | T6SS sigma-54-dependent regulator VasH | insig. | 48 | 50 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS23170 | | ATPase AAA | insig. | 41 | 68 |
| Variovorax sp. SCN45 | GFF7323 | | Transcriptional response regulatory protein GlrR | insig. | 41 | 64 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_18205 | | Fis family transcriptional regulator | insig. | 39 | 68 |
| Pseudomonas stutzeri RCH2 | Psest_0999 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | strong | 39 | 68 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS09195 | | Fis family transcriptional regulator | strong | 35 | 72 |
| Serratia liquefaciens MT49 | IAI46_19460 | | two-component system response regulator GlrR | insig. | 40 | 63 |
| Azospirillum brasilense Sp245 | AZOBR_RS26990 | | Fis family transcriptional regulator | insig. | 39 | 77 |
| Rhodanobacter denitrificans MT42 | LRK55_RS04800 | | sigma-54 dependent transcriptional regulator | cofit | 38 | 71 |