Homologs of RR42_RS35955 from Cupriavidus basilensis FW507-4G11

Fis family transcriptional regulator
SEED: Sigma-54 dependent transcriptional regulator

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Cupriavidus basilensis FW507-4G11 RR42_RS35955 Fis family transcriptional regulator insig. 100 100
o Ralstonia solanacearum GMI1000 RS_RS22325 sigma-54-dependent Fis family transcriptional regulator insig. 70 100
o Ralstonia solanacearum PSI07 RPSI07_RS05015 sigma-54-dependent Fis family transcriptional regulator insig. 70 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS18540 sigma-54-dependent Fis family transcriptional regulator insig. 68 100
o Ralstonia solanacearum UW163 UW163_RS20590 sigma-54-dependent Fis family transcriptional regulator insig. 68 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS19575 sigma-54-dependent Fis family transcriptional regulator sig. 68 100
o Paraburkholderia graminis OAS925 ABIE53_002431 DNA-binding NtrC family response regulator insig. 59 98
o Burkholderia phytofirmans PsJN BPHYT_RS08215 Fis family transcriptional regulator insig. 59 98
o Variovorax sp. OAS795 ABID97_RS24330 sigma 54-interacting transcriptional regulator insig. 54 98
o Variovorax sp. SCN45 GFF2200 sigma-54-dependent transcriptional regulator insig. 54 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS19020 sigma-54 dependent transcriptional regulator insig. 42 69
  Ralstonia solanacearum GMI1000 RS_RS25105 sigma-54-dependent Fis family transcriptional regulator cofit 40 75
  Desulfovibrio vulgaris Hildenborough JW710 DVU0118 ntrC sigma-54 dependent transcriptional regulator/response regulator (TIGR) insig. 41 68
  Paraburkholderia sabiae LMG 24235 QEN71_RS19345 sigma-54 dependent transcriptional regulator no data 42 68
  Bosea sp. OAE506 ABIE41_RS10895 sigma-54 dependent transcriptional regulator insig. 40 73
  Alteromonas macleodii MIT1002 MIT1002_01326 Quorum-sensing regulator protein F insig. 41 69
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1930 Transcriptional regulatory protein zraR insig. 41 69
  Ralstonia solanacearum PSI07 RPSI07_RS07835 sigma-54-dependent Fis family transcriptional regulator strong 40 74
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS23315 sigma-54-dependent Fis family transcriptional regulator strong 39 74
  Ralstonia solanacearum UW163 UW163_RS16565 sigma-54-dependent Fis family transcriptional regulator strong 39 74
  Dechlorosoma suillum PS Dsui_3486 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains cofit 42 69
  Ralstonia sp. UNC404CL21Col ABZR87_RS23515 sigma-54 dependent transcriptional regulator strong 39 73
  Pseudomonas aeruginosa PA14 IKLFDK_00790 two-component response regulator PilR strong 40 70
  Pseudomonas sp. BP01 JOY50_RS27675 sigma-54 dependent transcriptional regulator cofit 38 72
  Azospirillum sp. SherDot2 MPMX19_04512 C4-dicarboxylate transport transcriptional regulatory protein DctD insig. 40 69
  Marinobacter adhaerens HP15 HP15_725 two component, sigma54 specific, transcriptional regulator, Fis family strong 39 68
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5156 Two-component sensor CbrB: intrcellular carbon:nitrogen balance strong 39 72
  Pseudomonas fluorescens FW300-N2C3 AO356_16075 Fis family transcriptional regulator strong 38 73
  Pseudomonas sp. SVBP6 COO64_RS07975 sigma-54 dependent transcriptional regulator insig. 41 70
  Paraburkholderia sabiae LMG 24235 QEN71_RS43250 sigma-54 dependent transcriptional regulator insig. 41 75
  Pseudomonas sp. RS175 PFR28_03718 Transcriptional regulatory protein ZraR strong 39 70
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04930 Transcriptional regulatory protein ZraR insig. 39 70
  Pseudomonas simiae WCS417 PS417_23895 Fis family transcriptional regulator no data 39 70
  Pseudomonas fluorescens SBW25 PFLU_RS25735 sigma-54-dependent Fis family transcriptional regulator strong 38 70
  Pseudomonas fluorescens SBW25-INTG PFLU_RS25735 sigma-54-dependent Fis family transcriptional regulator strong 38 70
  Pseudomonas sp. S08-1 OH686_13325 Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake cofit 40 68
  Pseudomonas fluorescens FW300-N2E3 AO353_14200 transcriptional regulator insig. 40 68
  Pseudomonas fluorescens FW300-N2E3 AO353_14400 Fis family transcriptional regulator strong 37 73
  Pseudomonas syringae pv. syringae B728a Psyr_0831 Two-component response regulator CbrB sig. 38 76
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0831 Two-component response regulator CbrB no data 38 76
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5122 Type IV fimbriae expression regulatory protein PilR insig. 41 68
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2858 Two-component sensor CbrB: intrcellular carbon:nitrogen balance strong 39 70
  Pseudomonas simiae WCS417 PS417_05525 Fis family transcriptional regulator strong 39 68
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS11070 sigma-54 dependent transcriptional regulator cofit 38 70
  Pseudomonas sp. DMC3 GFF4030 Transcriptional regulatory protein ZraR strong 38 71
  Azospirillum sp. SherDot2 MPMX19_06333 Regulatory protein AtoC insig. 40 70
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_09510 sigma-54-dependent Fis family transcriptional regulator sig. 38 73
  Desulfovibrio vulgaris Miyazaki F DvMF_1260 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) insig. 39 68
  Pseudomonas fluorescens SBW25 PFLU_RS05610 sigma-54-dependent Fis family transcriptional regulator strong 39 68
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05610 sigma-54-dependent Fis family transcriptional regulator strong 39 68
  Acidovorax sp. GW101-3H11 Ac3H11_4019 Sigma-54 dependent transcriptional regulator sig. 38 73
  Shewanella oneidensis MR-1 SO3059 formate hydrogenlyase transcriptional activator, putative (NCBI ptt file) insig. 46 50
  Pseudomonas sp. S08-1 OH686_16390 Type IV fimbriae expression regulatory protein PilR cofit 40 68
  Cupriavidus basilensis FW507-4G11 RR42_RS03980 Fis family transcriptional regulator strong 39 69
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS05020 sigma-54 dependent transcriptional regulator strong 39 71
  Escherichia coli ECOR38 HEPCGN_21015 hyfR DNA-binding transcriptional activator HyfR insig. 38 70
  Paraburkholderia graminis OAS925 ABIE53_001365 DNA-binding NtrC family response regulator strong 39 73
  Escherichia fergusonii Becca EFB2_01635 Regulatory protein AtoC insig. 38 68
  Escherichia coli Nissle 1917 ECOLIN_RS12965 acetoacetate metabolism transcriptional regulator AtoC no data 38 68
  Shewanella sp. ANA-3 Shewana3_1488 sigma-54 dependent trancsriptional regulator (RefSeq) insig. 46 50
  Escherichia coli ECOR38 HEPCGN_22430 atoC acetoacetate metabolism transcriptional regulator AtoC insig. 38 68
  Escherichia coli BL21 ECD_02147 fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein insig. 38 68
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01490 Regulatory protein AtoC insig. 38 68
  Escherichia coli BW25113 b2220 atoC fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein (NCBI) insig. 38 68
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS04990 sigma-54 dependent transcriptional regulator cofit 38 71
  Escherichia coli ECRC100 OKFHMN_21850 hyfR DNA-binding transcriptional regulator HyfR insig. 37 75
  Escherichia coli ECRC101 MCAODC_12380 hyfR DNA-binding transcriptional regulator HyfR insig. 37 75
  Escherichia coli ECRC102 NIAGMN_19620 hyfR DNA-binding transcriptional regulator HyfR insig. 37 75
  Escherichia coli ECRC98 JDDGAC_25795 hyfR DNA-binding transcriptional regulator HyfR insig. 37 75
  Escherichia coli ECRC99 KEDOAH_06370 hyfR DNA-binding transcriptional regulator HyfR no data 37 75
  Pseudomonas aeruginosa PA14 IKLFDK_27655 two-component system response regulator DctD insig. 42 71
  Pseudomonas sp. S08-1 OH686_17260 Two-component sensor CbrB: intrcellular carbon:nitrogen balance strong 39 68
  Pseudomonas sp. SVBP6 COO64_RS15090 sigma-54 dependent transcriptional regulator strong 38 71
  Xanthobacter sp. DMC5 GFF2901 C4-dicarboxylate transport transcriptional regulatory protein DctD insig. 41 69
  Variovorax sp. SCN45 GFF3669 Two-component system response regulator protein no data 39 75
  Escherichia coli BL21 ECD_02383 hydrogenase-4 transcriptional activator cofit 38 70
  Pseudomonas putida KT2440 PP_4696 Nitrogen regulation protein NR(I) strong 38 72
  Dickeya dianthicola 67-19 HGI48_RS07265 formate hydrogenlyase transcriptional activator FlhA insig. 37 70
  Dickeya dianthicola ME23 DZA65_RS07775 formate hydrogenlyase transcriptional activator FlhA insig. 37 70
  Rhodopseudomonas palustris CGA009 TX73_007390 sigma-54-dependent Fis family transcriptional regulator insig. 36 69
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00240 two component, sigma54 specific, transcriptional regulator, NtrC subfamily, Fis family strong 39 73
  Escherichia coli ECRC62 BNILDI_12310 hyfR DNA-binding transcriptional regulator HyfR insig. 37 75
  Escherichia coli BW25113 b2491 hyfR putative 2-component regulator, interaction with sigma 54 (VIMSS) sig. 37 75
  Acidovorax sp. GW101-3H11 Ac3H11_4011 Putative sensory histidine kinase YfhA sig. 37 78
  Burkholderia phytofirmans PsJN BPHYT_RS05575 Fis family transcriptional regulator strong 39 73
  Rhodanobacter sp. FW510-T8 OKGIIK_01730 atoC sigma-54-dependent Fis family transcriptional regulator insig. 38 71
  Pseudomonas sp. SVBP6 COO64_RS00595 sigma-54 dependent transcriptional regulator insig. 41 68
  Paraburkholderia sabiae LMG 24235 QEN71_RS24790 sigma-54 dependent transcriptional regulator cofit 41 68
  Variovorax sp. OAS795 ABID97_RS06460 sigma 54-interacting transcriptional regulator cofit 40 64
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01235 DNA-binding transcriptional activator HyfR cofit 38 70
  Pseudomonas sp. BP01 JOY50_RS26915 sigma-54-dependent Fis family transcriptional regulator no data 48 50
  Pseudomonas sp. S08-1 OH686_06630 T6SS sigma-54-dependent regulator VasH insig. 48 50
  Herbaspirillum seropedicae SmR1 HSERO_RS23170 ATPase AAA insig. 41 68
  Variovorax sp. SCN45 GFF7323 Transcriptional response regulatory protein GlrR insig. 41 64
  Pseudomonas fluorescens FW300-N2C3 AO356_18205 Fis family transcriptional regulator insig. 39 68
  Pseudomonas stutzeri RCH2 Psest_0999 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains strong 39 68
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09195 Fis family transcriptional regulator strong 35 72
  Serratia liquefaciens MT49 IAI46_19460 two-component system response regulator GlrR insig. 40 63
  Azospirillum brasilense Sp245 AZOBR_RS26990 Fis family transcriptional regulator insig. 39 77
  Rhodanobacter denitrificans MT42 LRK55_RS04800 sigma-54 dependent transcriptional regulator cofit 38 71