Homologs of RR42_RS24590 from Cupriavidus basilensis FW507-4G11

RND transporter
SEED: FIG005548: transport protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Cupriavidus basilensis FW507-4G11 RR42_RS24590 RND transporter insig. 100 100
o Pseudomonas putida KT2440 PP_2812 putative Transporter insig. 66 99
o Herbaspirillum seropedicae SmR1 HSERO_RS19670 RND transporter insig. 65 99
  Herbaspirillum seropedicae SmR1 HSERO_RS17610 RND transporter insig. 63 100
  Shewanella loihica PV-4 Shew_1808 hypothetical protein (RefSeq) insig. 42 99
  Shewanella sp. ANA-3 Shewana3_1784 hypothetical protein (RefSeq) sig. 41 98
  Shewanella oneidensis MR-1 SO2594 conserved hypothetical protein (NCBI ptt file) insig. 41 98
  Shewanella amazonensis SB2B Sama_1591 adhesin-associated MmpL efflux pump (from data) cofit 41 99
  Alteromonas macleodii MIT1002 MIT1002_02033 efflux transporter, putative, hydrophobe/amphiphile efflux-3 (HAE3) family cofit 40 98
  Pseudomonas fluorescens SBW25 PFLU_RS17170 RND family transporter insig. 38 97
  Pseudomonas fluorescens SBW25-INTG PFLU_RS17170 RND family transporter sig. 38 97
  Pseudomonas simiae WCS417 PS417_15155 RND transporter insig. 38 97
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4616 FIG005548: transport protein strong 38 97
  Pseudomonas putida KT2440 PP_2019 adhesin-associated MmpL efflux pump (from data) strong 38 97
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3322 FIG005548: transport protein cofit 38 97
  Pseudomonas stutzeri RCH2 Psest_1924 adhesin-associated MmpL efflux pump (from data) strong 38 98
  Pseudomonas fluorescens FW300-N2E3 AO353_23640 RND transporter insig. 38 97
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_606 FIG005548: transport protein strong 38 97
  Pseudomonas sp. RS175 PFR28_01576 hypothetical protein strong 38 97
  Pseudomonas fluorescens FW300-N2C3 AO356_24570 RND transporter insig. 38 97
  Cupriavidus basilensis FW507-4G11 RR42_RS31880 transporter insig. 40 96
  Pseudomonas syringae pv. syringae B728a Psyr_1701 membrane protein, putative insig. 38 97
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1701 membrane protein, putative insig. 38 97
  Pseudomonas sp. S08-1 OH686_04240 Exporter protein, RND family strong 37 99
  Kangiella aquimarina DSM 16071 B158DRAFT_0997 adhesin-associated MmpL efflux pump (from data) insig. 39 96
  Pseudomonas fluorescens FW300-N2C3 AO356_29940 RND transporter insig. 38 97
  Marinobacter adhaerens HP15 HP15_1068 transporter strong 37 98
  Pseudomonas fluorescens FW300-N2C3 AO356_29135 RND transporter insig. 37 97
  Pseudomonas putida KT2440 PP_3202 putative Transporter sig. 38 98
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4892 FIG005548: transport protein cofit 37 98
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5984 FIG005548: transport protein insig. 37 97
  Pseudomonas sp. RS175 PFR28_01991 hypothetical protein insig. 38 98
  Marinobacter adhaerens HP15 HP15_10 transporter insig. 37 97
  Pseudomonas fluorescens FW300-N2E3 AO353_21060 RND transporter sig. 36 98
  Variovorax sp. OAS795 ABID97_RS13515 MMPL family transporter insig. 36 99
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3429 FIG005548: transport protein insig. 36 97
  Pseudomonas fluorescens FW300-N2C3 AO356_27940 RND transporter insig. 38 95
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1845 FIG005548: transport protein insig. 36 98
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1365 FIG005548: transport protein insig. 38 95
  Acidovorax sp. GW101-3H11 Ac3H11_2777 FIG005548: transport protein insig. 36 98
  Marinobacter adhaerens HP15 HP15_2606 transporter insig. 26 98
  Marinobacter adhaerens HP15 HP15_4021 exporters of the RND superfamily insig. 27 96
  Rhodanobacter denitrificans MT42 LRK55_RS07140 efflux RND transporter permease subunit cofit 25 97
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07410 efflux RND transporter permease subunit insig. 25 97
  Alteromonas macleodii MIT1002 MIT1002_02084 transport protein insig. 25 97
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5597 FIG005548: transport protein insig. 41 31
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17320 hypothetical protein strong 20 95
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05460 hypothetical protein insig. 20 89
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4559 Predicted exporter of the RND superfamily insig. 21 78
  Rhodopseudomonas palustris CGA009 TX73_019400 MMPL family transporter insig. 24 67
  Pseudomonas putida KT2440 PP_2787 putative Transporter insig. 20 79
  Methanococcus maripaludis S2 MMP_RS05285 MMPL family transporter strong 23 34
  Marinobacter adhaerens HP15 HP15_3693 multidrug resistance protein insig. 28 31
  Methanococcus maripaludis JJ MMJJ_RS09095 MMPL family transporter strong 23 34
  Caulobacter crescentus NA1000 CCNA_03301 cation/multidrug efflux pump AcrB strong 31 22
  Caulobacter crescentus NA1000 Δfur CCNA_03301 cation/multidrug efflux pump AcrB cofit 31 22
  Rhizobium sp. OAE497 ABIE40_RS23875 multidrug efflux RND transporter permease subunit insig. 29 28
  Rhizobium sp. OAE497 ABIE40_RS14575 efflux RND transporter permease subunit insig. 32 18
  Sinorhizobium meliloti 1021 SMc01829 transport transmembrane protein insig. 29 25
  Acidovorax sp. GW101-3H11 Ac3H11_1213 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA sig. 38 18
  Paraburkholderia sabiae LMG 24235 QEN71_RS29845 efflux RND transporter permease subunit insig. 27 23
  Variovorax sp. OAS795 ABID97_RS17720 efflux RND transporter permease subunit insig. 33 20
  Pseudomonas sp. S08-1 OH686_15855 hypothetical protein cofit 20 64
  Variovorax sp. SCN45 GFF522 RND efflux system, inner membrane transporter insig. 33 20
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_13040 acriflavin resistance protein insig. 26 22
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1217 RND multidrug efflux transporter; Acriflavin resistance protein cofit 23 40
  Variovorax sp. SCN45 GFF3509 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) => MexI of MexHI-OpmD system insig. 26 28
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS17275 AcrB/AcrD/AcrF family protein insig. 25 23
  Ralstonia solanacearum UW163 UW163_RS21870 AcrB/AcrD/AcrF family protein insig. 25 23
  Alteromonas macleodii MIT1002 MIT1002_03866 efflux transporter, putative, hydrophobe/amphiphile efflux-3 (HAE3) family insig. 22 38
  Ralstonia sp. UNC404CL21Col ABZR87_RS20905 efflux RND transporter permease subunit insig. 31 19
  Agrobacterium fabrum C58 Atu2393 Acr family transporter sig. 30 18
  Azospirillum brasilense Sp245 AZOBR_RS31320 acriflavine resistance protein B strong 25 26
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17440 Fis family transcriptional regulator strong 20 71
  Pseudomonas sp. RS175 PFR28_02065 Multidrug resistance protein MdtC insig. 31 19
  Ralstonia solanacearum GMI1000 RS_RS24145 AcrB/AcrD/AcrF family protein insig. 24 23
  Phocaeicola dorei CL03T12C01 ABI39_RS09435 efflux RND transporter permease subunit insig. 25 24
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13825 efflux RND transporter permease subunit insig. 25 24
  Ralstonia solanacearum PSI07 RPSI07_RS02515 AcrB/AcrD/AcrF family protein insig. 31 20
  Pseudomonas putida KT2440 PP_2065 Multidrug efflux RND transporter insig. 27 30
  Rhodopseudomonas palustris CGA009 TX73_019545 MexW/MexI family multidrug efflux RND transporter permease subunit cofit 24 24
  Kangiella aquimarina DSM 16071 B158DRAFT_0350 Predicted exporters of the RND superfamily insig. 21 28
  Mycobacterium tuberculosis H37Rv Rv2339 Probable conserved transmembrane transport protein MmpL9 insig. 27 29
  Mycobacterium tuberculosis H37Rv Rv1522c Probable conserved transmembrane transport protein MmpL12 insig. 26 19
  Bacteroides stercoris CC31F HMPREF1181_RS09455 efflux RND transporter permease subunit insig. 25 24
  Ralstonia solanacearum PSI07 RPSI07_RS02385 AcrB/AcrD/AcrF family protein insig. 24 23
  Ralstonia solanacearum GMI1000 RS_RS20330 AcrB/AcrD/AcrF family protein insig. 33 19
  Ralstonia solanacearum PSI07 RPSI07_RS07460 AcrB/AcrD/AcrF family protein insig. 30 20
  Kangiella aquimarina DSM 16071 B158DRAFT_0350 Predicted exporters of the RND superfamily insig. 21 54
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS16240 AcrB/AcrD/AcrF family protein insig. 29 20
  Ralstonia solanacearum UW163 UW163_RS16975 AcrB/AcrD/AcrF family protein insig. 29 20
  Castellaniella sp019104865 MT123 ABCV34_RS14620 multidrug efflux RND transporter permease subunit cofit 27 25
  Paraburkholderia graminis OAS925 ABIE53_001782 multidrug efflux pump strong 23 26
  Paraburkholderia sabiae LMG 24235 QEN71_RS23310 efflux RND transporter permease subunit cofit 24 25
  Marinobacter adhaerens HP15 HP15_933 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family insig. 29 24
  Rhodopseudomonas palustris CGA009 TX73_024325 efflux RND transporter permease subunit insig. 27 19
  Caulobacter crescentus NA1000 CCNA_03301 cation/multidrug efflux pump AcrB strong 25 18
  Caulobacter crescentus NA1000 Δfur CCNA_03301 cation/multidrug efflux pump AcrB cofit 25 18
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_21440 metal transporter strong 24 23
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4562 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA insig. 31 19