| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0802 | | Peptidase S1, chymotrypsin | insig. | 100 | 100 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0802 | | Peptidase S1, chymotrypsin | insig. | 100 | 100 |
| o | Pseudomonas segetis P6 | MPMX49_01877 | | hypothetical protein | cofit | 61 | 99 |
| | Rhodopseudomonas palustris CGA009 | TX73_012555 | | serine protease | insig. | 32 | 51 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS11325 | | hypothetical protein | insig. | 34 | 48 |
| | Shewanella amazonensis SB2B | Sama_3400 | | trypsin-like serine protease (RefSeq) | insig. | 28 | 46 |
| | Xanthobacter sp. DMC5 | GFF3166 | | Periplasmic serine endoprotease DegP | insig. | 35 | 46 |
| | Sinorhizobium meliloti 1021 | SMc01438 | | protease precursor signal peptide protein | strong | 34 | 41 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU1468 | htrA | peptidase/PDZ domain protein (TIGR) | strong | 27 | 52 |
| | Dinoroseobacter shibae DFL-12 | Dshi_2733 | | protease Do (RefSeq) | strong | 37 | 39 |
| | Variovorax sp. OAS795 | ABID97_RS24995 | | serine protease | insig. | 34 | 41 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS06255 | | serine protease | strong | 26 | 51 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS08660 | | serine protease | insig. | 31 | 42 |
| | Bosea sp. OAE506 | ABIE41_RS14685 | | Do family serine endopeptidase | no data | 31 | 46 |
| | Rhizobium sp. OAE497 | ABIE40_RS11520 | | DegQ family serine endoprotease | strong | 34 | 44 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01607 | | serine protease, S1-C subfamily, contains C-terminal PDZ domain | insig. | 31 | 54 |
| | Rhodospirillum rubrum S1H | Rru_A2201 | | Peptidase S1C, Do (NCBI) | sig. | 35 | 44 |
| | Rhodopseudomonas palustris CGA009 | TX73_018065 | | Do family serine endopeptidase | sig. | 33 | 46 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_13130 | | peptidase S1 | sig. | 29 | 45 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS09435 | | serine protease | insig. | 24 | 47 |
| | Rhizobium sp. OAE497 | ABIE40_RS20720 | | DegQ family serine endoprotease | cofit | 33 | 44 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS07245 | | DegQ family serine endoprotease | cofit | 33 | 40 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS07245 | | DegQ family serine endoprotease | strong | 33 | 40 |
| | Agrobacterium fabrum C58 | Atu2043 | | htrA family protein | sig. | 32 | 46 |
| | Azospirillum sp. SherDot2 | MPMX19_05995 | | hypothetical protein | insig. | 32 | 48 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0308 | | protease Do (RefSeq) | strong | 26 | 52 |
| | Pseudomonas sp. RS175 | PFR28_00693 | | Periplasmic serine endoprotease DegP | strong | 32 | 40 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_04560 | | serine peptidase | sig. | 31 | 41 |
| | Agrobacterium fabrum C58 | Atu0977 | | serine protease DO-like protease | strong | 30 | 60 |
| | Azospirillum sp. SherDot2 | MPMX19_00793 | | hypothetical protein | cofit | 34 | 42 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS10155 | | S1C family serine protease | no data | 27 | 44 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04358 | | serine protease Do | sig. | 30 | 38 |
| | Variovorax sp. SCN45 | GFF789 | | protease Do | insig. | 33 | 49 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS27030 | | hypothetical protein | insig. | 31 | 45 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS15380 | | serine protease | insig. | 29 | 40 |
| | Klebsiella michiganensis M5al | BWI76_RS05180 | | serine endoprotease DegQ | strong | 31 | 44 |
| | Paraburkholderia graminis OAS925 | ABIE53_003040 | | serine protease Do | strong | 30 | 38 |
| | Variovorax sp. SCN45 | GFF6081 | | Peptidase S1 and S6, chymotrypsin/Hap | insig. | 32 | 43 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c01920 | | protease DegQ | strong | 29 | 45 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF369 | | Trypsin domain protein | insig. | 34 | 39 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF60 | | HtrA protease/chaperone protein | insig. | 31 | 41 |
| | Variovorax sp. OAS795 | ABID97_RS22730 | | trypsin-like peptidase domain-containing protein | no data | 32 | 40 |
| | Bosea sp. OAE506 | ABIE41_RS12865 | | DegQ family serine endoprotease | strong | 33 | 44 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2753 | | HtrA protease/chaperone protein | strong | 30 | 41 |
| | Methylophilus sp. DMC18 | GFF1488 | | hypothetical protein | insig. | 30 | 37 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c23690 | | protease do | strong | 35 | 41 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS13390 | | trypsin-like peptidase domain-containing protein | insig. | 28 | 56 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS04590 | | DegQ family serine endoprotease | cofit | 27 | 53 |
| | Pseudomonas sp. DMC3 | GFF2280 | | Periplasmic serine endoprotease DegP | insig. | 31 | 40 |
| | Escherichia coli ECRC101 | MCAODC_00770 | degP | serine endoprotease DegP | sig. | 31 | 38 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03501 | | Periplasmic serine endoprotease DegP | strong | 31 | 38 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS17615 | | PDZ domain-containing protein | cofit | 35 | 38 |
| | Escherichia coli BL21 | ECD_00160 | | serine endoprotease (protease Do), membrane-associated | strong | 31 | 38 |
| | Escherichia coli ECOR27 | NOLOHH_02600 | degP | serine endoprotease DegP | insig. | 31 | 38 |
| | Escherichia coli ECRC100 | OKFHMN_10255 | degP | serine endoprotease DegP | insig. | 31 | 38 |
| | Escherichia coli ECRC102 | NIAGMN_08105 | degP | serine endoprotease DegP | sig. | 31 | 38 |
| | Escherichia coli ECRC62 | BNILDI_09070 | degP | serine endoprotease DegP | cofit | 31 | 38 |
| | Escherichia coli ECRC98 | JDDGAC_13850 | degP | serine endoprotease DegP | insig. | 31 | 38 |
| | Escherichia coli ECRC99 | KEDOAH_17900 | degP | serine endoprotease DegP | no data | 31 | 38 |
| | Escherichia coli BW25113 | b0161 | degP | serine endoprotease (protease Do), membrane-associated (NCBI) | strong | 31 | 38 |
| | Erwinia amylovora T8 | OLJFJH_00660 | | serine endoprotease DegP | sig. | 31 | 41 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS14390 | | peptidase | sig. | 30 | 37 |
| | Azospirillum sp. SherDot2 | MPMX19_01249 | | Periplasmic serine endoprotease DegP | insig. | 32 | 41 |
| | Escherichia fergusonii Becca | EFB2_03883 | | Periplasmic serine endoprotease DegP | insig. | 31 | 38 |
| | Escherichia coli ECOR38 | HEPCGN_08205 | degP | serine endoprotease DegP | sig. | 31 | 38 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS00895 | | serine endoprotease DegP | insig. | 31 | 38 |
| | Xanthobacter sp. DMC5 | GFF3126 | | Periplasmic serine endoprotease DegP | no data | 32 | 47 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01575 | | Periplasmic serine endoprotease DegP | cofit | 31 | 37 |
| | Pseudomonas orientalis W4I3 | QF045_RS09850 | | DegQ family serine endoprotease | insig. | 31 | 37 |
| | Azospirillum brasilense Sp245 | AZOBR_RS06535 | | serine protease | no data | 30 | 44 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_17640 | | serine peptidase | sig. | 30 | 42 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3326 | | HtrA protease/chaperone protein | no data | 30 | 41 |
| | Rhodopseudomonas palustris CGA009 | TX73_023750 | | Do family serine endopeptidase | insig. | 28 | 58 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_13425 | | serine endoprotease DegP | sig. | 28 | 52 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2121 | | 2-alkenal reductase (RefSeq) | insig. | 33 | 37 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_3750 | | periplasmic serine protease, Do/DeqQ family | insig. | 30 | 44 |
| | Dechlorosoma suillum PS | Dsui_1426 | | periplasmic serine protease, Do/DeqQ family | cofit | 32 | 38 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS15810 | | trypsin-like serine protease | insig. | 31 | 40 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS14065 | | serine peptidase | strong | 29 | 50 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF3729 | | Serine protease precursor MucD/AlgY associated with sigma factor RpoE | insig. | 33 | 41 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1101 | | PDZ/DHR/GLGF | sig. | 31 | 43 |
| | Azospirillum brasilense Sp245 | AZOBR_RS08200 | | serine protease | insig. | 30 | 44 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT0765 | | putative protease (NCBI ptt file) | insig. | 28 | 44 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS02485 | | DegQ family serine endoprotease | insig. | 31 | 41 |
| | Rahnella sp. WP5 | EX31_RS03170 | | serine endoprotease DegP | insig. | 30 | 38 |
| | Xanthobacter sp. DMC5 | GFF1352 | | Periplasmic pH-dependent serine endoprotease DegQ | insig. | 35 | 37 |
| | Sinorhizobium meliloti 1021 | SMc01280 | | protease | insig. | 31 | 44 |
| | Enterobacter sp. TBS_079 | MPMX20_00847 | | Periplasmic serine endoprotease DegP | insig. | 29 | 44 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU3278 | htrA | peptidase/PDZ domain protein (TIGR) | insig. | 33 | 37 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS09260 | | HhoA/HhoB/HtrA family serine endopeptidase | strong | 31 | 51 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS10180 | | DegQ family serine endoprotease | insig. | 30 | 35 |
| | Agrobacterium fabrum C58 | Atu1915 | | htrA family protein | insig. | 28 | 51 |
| | Variovorax sp. SCN45 | GFF7246 | | HtrA protease/chaperone protein | insig. | 33 | 35 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS21365 | | serine protease | insig. | 30 | 49 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1300 | | Outer membrane stress sensor protease DegS | insig. | 29 | 46 |
| | Dechlorosoma suillum PS | Dsui_2455 | | periplasmic serine protease, Do/DeqQ family | cofit | 25 | 52 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS20260 | | 2-alkenal reductase | insig. | 30 | 37 |
| | Azospirillum brasilense Sp245 | AZOBR_RS17805 | | serine protease | insig. | 34 | 44 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS17665 | | PDZ domain-containing protein | no data | 31 | 47 |
| | Sinorhizobium meliloti 1021 | SMc02365 | | protease precursor protein | strong | 28 | 53 |