Homologs of Psyr_0236 from Pseudomonas syringae pv. syringae B728a

Endoribonuclease L-PSP
SEED: Putative translation initiation inhibitor, yjgF family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas syringae pv. syringae B728a Psyr_0236 Endoribonuclease L-PSP no data 100 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0236 Endoribonuclease L-PSP insig. 100 100
o Pseudomonas simiae WCS417 PS417_27700 cytochrome C2 no data 90 100
o Pseudomonas orientalis W4I3 QF045_RS02050 RidA family protein cofit 88 100
o Pseudomonas fluorescens SBW25 PFLU_RS29375 RidA family protein insig. 87 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS29375 RidA family protein insig. 87 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_00007 2-iminobutanoate/2-iminopropanoate deaminase cofit 85 100
o Pseudomonas sp. SVBP6 COO64_RS01390 RidA family protein insig. 85 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2145 Translation initiation inhibitor insig. 86 100
o Pseudomonas sp. RS175 PFR28_04398 2-iminobutanoate/2-iminopropanoate deaminase sig. 85 100
o Pseudomonas fluorescens FW300-N2E3 AO353_09150 cytochrome C2 sig. 87 100
o Pseudomonas fluorescens FW300-N2C3 AO356_12625 cytochrome C2 insig. 86 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4392 Translation initiation inhibitor insig. 87 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_813 Translation initiation inhibitor insig. 85 100
o Pseudomonas aeruginosa MRSN321 DY961_RS12405 RidA family protein sig. 85 100
o Pseudomonas aeruginosa PA14 IKLFDK_26935 RidA family protein sig. 85 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS49725 RidA family protein sig. 85 100
o Pseudomonas sp. DMC3 GFF389 2-iminobutanoate/2-iminopropanoate deaminase insig. 78 100
o Pseudomonas segetis P6 MPMX49_00007 2-iminobutanoate/2-iminopropanoate deaminase insig. 57 100
o Pseudomonas stutzeri RCH2 Psest_3792 Putative translation initiation inhibitor, yjgF family sig. 56 100
o Herbaspirillum seropedicae SmR1 HSERO_RS09850 aminoacrylate peracid reductase no data 59 98
o Pseudomonas sp. S08-1 OH686_13690 RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein insig. 57 98
  Pseudomonas segetis P6 MPMX49_03293 2-iminobutanoate/2-iminopropanoate deaminase insig. 58 99
o Pseudomonas putida KT2440 PP_4435 conserved protein of unknown function sig. 55 99
o Sinorhizobium meliloti 1021 SMc00791 hypothetical protein insig. 64 99
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3401 Translation initiation inhibitor insig. 58 97
  Pseudomonas stutzeri RCH2 Psest_2118 Putative translation initiation inhibitor, yjgF family no data 56 98
o Marinobacter adhaerens HP15 HP15_3957 endoribonuclease L-PSP family protein strong 53 98
o Shewanella amazonensis SB2B Sama_3317 hypothetical protein (RefSeq) insig. 55 98
o Pseudomonas sp. BP01 JOY50_RS06360 RidA family protein no data 55 97
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04498 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family cofit 52 98
o Azospirillum brasilense Sp245 AZOBR_RS27125 endoribonuclease insig. 54 99
o Azospirillum sp. SherDot2 MPMX19_01538 2-iminobutanoate/2-iminopropanoate deaminase insig. 57 98
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3612.1 Putative translation initiation inhibitor, yjgF family insig. 53 97
  Azospirillum brasilense Sp245 AZOBR_RS10820 endoribonuclease insig. 55 98
o Burkholderia phytofirmans PsJN BPHYT_RS13660 aminoacrylate peracid reductase insig. 52 98
o Paraburkholderia graminis OAS925 ABIE53_002906 enamine deaminase RidA (YjgF/YER057c/UK114 family) sig. 52 98
o Shewanella oneidensis MR-1 SO0337 hypothetical translation initiation inhibitor, yjgF family (NCBI ptt file) insig. 51 99
  Burkholderia phytofirmans PsJN BPHYT_RS09365 cytochrome C2 insig. 55 96
o Acinetobacter radioresistens SK82 MPMX26_00129 Putative aminoacrylate peracid reductase RutC insig. 50 100
o Shewanella sp. ANA-3 Shewana3_3834 endoribonuclease L-PSP (RefSeq) insig. 51 99
o Acinetobacter baumannii LAC-4 RR41_RS17975 RidA family protein insig. 48 100
  Pseudomonas segetis P6 MPMX49_01921 RutC family protein insig. 54 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS05260 RidA family protein insig. 51 98
o Phaeobacter inhibens DSM 17395 PGA1_c26890 putative endoribonuclease insig. 54 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS33240 RidA family protein no data 54 96
  Paraburkholderia graminis OAS925 ABIE53_006269 enamine deaminase RidA (YjgF/YER057c/UK114 family) no data 54 96
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS17060 RidA family protein insig. 52 97
o Xanthobacter sp. DMC5 GFF1972 Putative aminoacrylate peracid reductase RutC insig. 57 98
o Dechlorosoma suillum PS Dsui_1999 putative translation initiation inhibitor, yjgF family insig. 55 98
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01267 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family insig. 52 96
o Rhodanobacter denitrificans MT42 LRK55_RS16775 RidA family protein no data 51 97
o Bosea sp. OAE506 ABIE41_RS03830 RidA family protein insig. 56 98
  Azospirillum sp. SherDot2 MPMX19_02977 2-iminobutanoate/2-iminopropanoate deaminase insig. 52 99
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1097 Translation initiation inhibitor no data 50 99
  Pseudomonas fluorescens FW300-N2C3 AO356_26120 cytochrome C2 no data 48 99
o Cupriavidus basilensis FW507-4G11 RR42_RS29610 cytochrome C2 insig. 50 97
  Pseudomonas aeruginosa MRSN321 DY961_RS11245 RidA family protein sig. 53 98
  Pseudomonas aeruginosa PA14 IKLFDK_28110 RidA family protein sig. 53 98
  Pseudomonas aeruginosa PUPa3 DQ20_RS50840 RidA family protein sig. 53 98
  Pseudomonas fluorescens FW300-N2E3 AO353_08060 hypothetical protein insig. 52 98
o Variovorax sp. OAS795 ABID97_RS21695 RidA family protein no data 48 99
  Pseudomonas simiae WCS417 PS417_26555 endoribonuclease L-PSP insig. 53 97
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1041 Putative translation initiation inhibitor, yjgF family insig. 51 98
  Pseudomonas fluorescens SBW25 PFLU_RS28210 RidA family protein insig. 51 97
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28210 RidA family protein insig. 51 97
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2374 Translation initiation inhibitor no data 51 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS36345 RidA family protein insig. 48 97
  Cupriavidus basilensis FW507-4G11 RR42_RS06580 aminoacrylate peracid reductase strong 50 97
o Variovorax sp. SCN45 GFF3101 RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein insig. 47 97
  Acinetobacter baumannii LAC-4 RR41_RS18365 RidA family protein insig. 50 97
o Rhodospirillum rubrum S1H Rru_A1174 Endoribonuclease L-PSP (NCBI) sig. 51 98
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05442 Putative aminoacrylate peracid reductase RutC no data 50 97
o Dinoroseobacter shibae DFL-12 Dshi_3201 Endoribonuclease L-PSP (RefSeq) insig. 50 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS09605 RidA family protein insig. 49 96
  Azospirillum sp. SherDot2 MPMX19_04537 2-iminobutanoate/2-iminopropanoate deaminase no data 51 99
  Pseudomonas aeruginosa MRSN321 DY961_RS19480 RidA family protein insig. 44 100
  Pseudomonas aeruginosa PUPa3 DQ20_RS53600 RidA family protein sig. 44 100
o Klebsiella pneumoniae MKP103 KDGMDA_24350 RidA family protein no data 45 97
  Pseudomonas aeruginosa PA14 IKLFDK_07500 RidA family protein sig. 44 100
  Burkholderia phytofirmans PsJN BPHYT_RS18510 endoribonuclease L-PSP insig. 51 96
  Bosea sp. OAE506 ABIE41_RS14320 RidA family protein no data 50 98
o Agrobacterium fabrum C58 Atu2130 hypothetical protein sig. 47 99
o Ralstonia solanacearum PSI07 RPSI07_RS07500 RidA family protein no data 47 96
  Azospirillum sp. SherDot2 MPMX19_04484 2-iminobutanoate/2-iminopropanoate deaminase insig. 44 97
o Ralstonia sp. UNC404CL21Col ABZR87_RS23140 RidA family protein no data 46 96
  Azospirillum brasilense Sp245 AZOBR_RS26395 endoribonuclease insig. 44 97
o Rhizobium sp. OAE497 ABIE40_RS11990 RidA family protein cofit 48 99
o Ralstonia solanacearum GMI1000 RS_RS07925 RidA family protein insig. 47 97
  Phaeobacter inhibens DSM 17395 PGA1_262p01770 putative endoribonuclease insig. 47 97
o Castellaniella sp019104865 MT123 ABCV34_RS09270 RidA family protein insig. 46 99
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS16200 RidA family protein no data 46 96
o Ralstonia solanacearum UW163 UW163_RS16935 RidA family protein no data 46 96
o Serratia liquefaciens MT49 IAI46_14555 RidA family protein insig. 44 99
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08755 RidA family protein insig. 50 97
o Pectobacterium carotovorum WPP14 HER17_RS11295 RidA family protein insig. 42 99
  Klebsiella pneumoniae MKP103 KDGMDA_25140 RutC family protein YoaB insig. 44 99
  Pseudomonas sp. BP01 JOY50_RS05225 RidA family protein no data 46 91
  Bosea sp. OAE506 ABIE41_RS08055 RidA family protein insig. 45 97
  Ralstonia solanacearum PSI07 RPSI07_RS15680 RidA family protein insig. 47 97