Homologs of Pf6N2E2_290 from Pseudomonas fluorescens FW300-N2E2

Cold shock protein CspD
SEED: Cold shock protein CspD
KEGG: cold shock protein (beta-ribbon, CspA family)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_290 Cold shock protein CspD insig. 100 100
o Pseudomonas sp. RS175 PFR28_02615 hypothetical protein insig. 79 100
o Pseudomonas fluorescens FW300-N2C3 AO356_22140 cold-shock protein insig. 78 100
o Pseudomonas simiae WCS417 PS417_16520 cold-shock protein insig. 71 97
o Pseudomonas sp. S08-1 OH686_00225 cold shock domain protein CspD insig. 73 87
o Pseudomonas fluorescens SBW25 PFLU_RS18560 cold shock domain-containing protein CspD insig. 66 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS18560 cold shock domain-containing protein CspD insig. 66 100
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2644 Cold shock protein CspD insig. 80 78
o Pseudomonas fluorescens FW300-N2E3 AO353_27685 cold-shock protein strong 70 84
o Pseudomonas stutzeri RCH2 Psest_2025 cold shock domain protein CspD strong 66 91
  Pseudomonas putida KT2440 PP_4010 DNA replication inhibitor strong 77 72
  Pseudomonas syringae pv. syringae B728a Psyr_3185 cold-shock DNA-binding protein family no data 68 81
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3185 cold-shock DNA-binding protein family no data 68 81
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4053 Cold shock protein CspD insig. 63 82
  Alteromonas macleodii MIT1002 MIT1002_01832 Cold shock-like protein CspD cofit 73 70
  Marinobacter adhaerens HP15 HP15_2082 cold-shock DNA-binding domain protein cofit 73 70
  Shewanella sp. ANA-3 Shewana3_1751 cold-shock DNA-binding protein family protein (RefSeq) strong 68 71
  Shewanella oneidensis MR-1 SO2628 cspD stress response protein CspD (NCBI ptt file) strong 68 71
  Klebsiella michiganensis M5al BWI76_RS09605 cold-shock protein no data 68 78
  Shewanella amazonensis SB2B Sama_2058 cold-shock DNA-binding domain-containing protein (RefSeq) sig. 68 71
  Shewanella loihica PV-4 Shew_1564 cold-shock DNA-binding domain-containing protein (RefSeq) sig. 68 71
  Enterobacter asburiae PDN3 EX28DRAFT_2052 cold shock domain protein CspD insig. 68 76
  Enterobacter sp. TBS_079 MPMX20_01542 Cold shock-like protein CspD strong 66 76
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4903 Cold shock protein CspD no data 66 76
  Serratia liquefaciens MT49 IAI46_08505 cold shock-like protein CspD insig. 65 76
  Escherichia coli BL21 ECD_00885 inhibitor of DNA replication, cold shock protein-like protein no data 66 76
  Escherichia fergusonii Becca EFB2_03181 Cold shock-like protein CspD insig. 66 76
  Escherichia coli ECOR27 NOLOHH_22195 cspD cold shock-like protein CspD no data 66 76
  Escherichia coli ECOR38 HEPCGN_22885 cspD cold shock-like protein CspD cofit 66 76
  Escherichia coli ECRC101 OKFHMN_05800 cspD cold shock-like protein CspD no data 66 76
  Escherichia coli ECRC101 MCAODC_25015 cspD cold shock-like protein CspD insig. 66 76
  Escherichia coli ECRC102 NIAGMN_03840 cspD cold shock-like protein CspD no data 66 76
  Escherichia coli ECRC62 BNILDI_20450 cspD cold shock-like protein CspD insig. 66 76
  Escherichia coli ECRC98 JDDGAC_09435 cspD cold shock-like protein CspD no data 66 76
  Escherichia coli ECRC99 KEDOAH_22110 cspD cold shock-like protein CspD no data 66 76
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02788 Cold shock-like protein CspD no data 66 76
  Escherichia coli Nissle 1917 ECOLIN_RS04685 cold shock-like protein CspD no data 66 76
  Escherichia coli BW25113 b0880 cspD cold shock protein homolog (NCBI) insig. 66 76
  Pectobacterium carotovorum WPP14 HER17_RS12410 cold shock-like protein CspD insig. 66 76
  Vibrio cholerae E7946 ATCC 55056 CSW01_05795 cold-shock protein CspD insig. 63 71
  Rahnella sp. WP5 EX31_RS18570 cold shock-like protein CspD strong 65 76
  Pantoea sp. MT58 IAI47_12955 cold shock-like protein CspD insig. 68 67
  Dechlorosoma suillum PS Dsui_0007 cold shock protein insig. 66 71
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS18735 cold-shock protein insig. 62 73
  Ralstonia solanacearum GMI1000 RS_RS22215 cold-shock protein sig. 62 73
  Ralstonia solanacearum PSI07 RPSI07_RS04860 cold-shock protein no data 62 73
  Ralstonia solanacearum UW163 UW163_RS20395 cold-shock protein insig. 62 73
  Burkholderia phytofirmans PsJN BPHYT_RS15720 cold-shock protein no data 64 72
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04084 cold-shock DNA-binding protein family no data 64 72
  Paraburkholderia graminis OAS925 ABIE53_003308 CspA family cold shock protein no data 64 72
  Ralstonia solanacearum GMI1000 RS_RS12380 cold-shock protein no data 62 74
  Paraburkholderia sabiae LMG 24235 QEN71_RS02995 cold shock domain-containing protein CspD sig. 63 71
  Herbaspirillum seropedicae SmR1 HSERO_RS07020 cold-shock protein no data 65 71
  Dickeya dadantii 3937 DDA3937_RS09550 cold shock-like protein CspD sig. 62 78
  Ralstonia solanacearum PSI07 RPSI07_RS12565 cold-shock protein no data 61 74
  Dickeya dianthicola 67-19 HGI48_RS09565 cold shock-like protein CspD cofit 62 78
  Dickeya dianthicola ME23 DZA65_RS09875 cold shock-like protein CspD insig. 62 78
  Cupriavidus basilensis FW507-4G11 RR42_RS17115 cold-shock protein no data 61 72
  Castellaniella sp019104865 MT123 ABCV34_RS05315 cold-shock protein insig. 60 73
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS04820 cold-shock protein no data 60 73
  Ralstonia solanacearum UW163 UW163_RS08850 cold-shock protein no data 60 73
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4727 Cold shock protein CspD insig. 57 73
  Ralstonia sp. UNC404CL21Col ABZR87_RS19675 cold-shock protein insig. 64 70
  Ralstonia sp. UNC404CL21Col ABZR87_RS00445 cold-shock protein strong 58 73
  Burkholderia phytofirmans PsJN BPHYT_RS17545 cold-shock protein sig. 62 73
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05686 cold-shock DNA-binding protein family no data 62 73
  Paraburkholderia graminis OAS925 ABIE53_003669 CspA family cold shock protein strong 62 73
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3498.1 hypothetical protein strong 51 80
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3660.1 Cold shock protein CspD insig. 56 74
  Pseudomonas sp. RS175 PFR28_04128 Cold shock-like protein CspA insig. 54 75
  Paraburkholderia sabiae LMG 24235 QEN71_RS27700 cold-shock protein no data 62 71
  Pseudomonas fluorescens FW300-N2C3 AO356_14005 cold-shock protein insig. 55 73
  Paraburkholderia sabiae LMG 24235 QEN71_RS35875 cold-shock protein insig. 59 71
  Ralstonia sp. UNC404CL21Col ABZR87_RS16270 cold-shock protein strong 61 72
  Paraburkholderia sabiae LMG 24235 QEN71_RS39145 cold-shock protein no data 57 71
  Lysobacter sp. OAE881 ABIE51_RS13800 cold-shock protein strong 54 73
  Ralstonia solanacearum GMI1000 RS_RS17205 cold-shock protein strong 59 72
  Ralstonia solanacearum PSI07 RPSI07_RS00010 cold-shock protein no data 59 72
  Burkholderia phytofirmans PsJN BPHYT_RS10920 cold-shock protein no data 57 73
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01154 cold-shock DNA-binding protein family no data 57 73
  Paraburkholderia graminis OAS925 ABIE53_002280 CspA family cold shock protein no data 57 73
  Paraburkholderia sabiae LMG 24235 QEN71_RS03700 cold-shock protein insig. 59 71
  Cupriavidus basilensis FW507-4G11 RR42_RS20855 cold-shock protein sig. 61 72
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS23260 cold-shock protein no data 59 72
  Ralstonia solanacearum UW163 UW163_RS16510 cold-shock protein no data 59 72
  Paraburkholderia graminis OAS925 ABIE53_003225 CspA family cold shock protein sig. 59 71
  Shewanella amazonensis SB2B Sama_1960 cold-shock DNA-binding domain-containing protein (RefSeq) insig. 51 78
  Paraburkholderia sabiae LMG 24235 QEN71_RS36275 cold-shock protein no data 58 73
  Paraburkholderia sabiae LMG 24235 QEN71_RS43010 cold-shock protein insig. 57 73
  Burkholderia phytofirmans PsJN BPHYT_RS33480 cold-shock protein no data 56 71
  Burkholderia phytofirmans PsJN BPHYT_RS15270 cold-shock protein no data 60 70
  Lysobacter sp. OAE881 ABIE51_RS12600 cold-shock protein insig. 55 70
  Paraburkholderia sabiae LMG 24235 QEN71_RS41860 cold-shock protein no data 57 71
  Burkholderia phytofirmans PsJN BPHYT_RS34185 cold-shock protein sig. 57 71
  Herbaspirillum seropedicae SmR1 HSERO_RS15195 cold-shock protein no data 58 70
  Kangiella aquimarina DSM 16071 B158DRAFT_1826 Cold shock proteins strong 51 76
  Marinobacter adhaerens HP15 HP15_2054 cold shock, CspA insig. 55 73
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00535 cold-shock protein no data 55 70
  Rhodanobacter sp. FW510-T8 OKGIIK_07815 cspC cold-shock protein no data 52 73
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03525 cold-shock DNA-binding protein family sig. 56 70