Homologs of Pf1N1B4_4523 from Pseudomonas fluorescens FW300-N1B4

RNA polymerase sigma-70 factor, ECF subfamily
SEED: RNA polymerase sigma-70 factor, ECF subfamily
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4523 RNA polymerase sigma-70 factor, ECF subfamily insig. 100 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_3501 RNA polymerase sigma-70 factor, ECF subfamily insig. 87 100
o Variovorax sp. OAS795 ABID97_RS02030 RNA polymerase sigma-70 factor insig. 44 96
o Variovorax sp. SCN45 GFF5440 RNA polymerase ECF-type sigma factor insig. 43 96
o Paraburkholderia sabiae LMG 24235 QEN71_RS31540 RNA polymerase sigma-70 factor insig. 43 95
o Lysobacter sp. OAE881 ABIE51_RS08425 RNA polymerase sigma-70 factor insig. 41 94
o Acidovorax sp. GW101-3H11 Ac3H11_4965 RNA polymerase ECF-type sigma factor insig. 39 98
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF235 Putative RNA polymerase sigma factor insig. 41 97
o Ralstonia solanacearum PSI07 RPSI07_RS23355 RNA polymerase sigma-70 factor insig. 41 94
o Caulobacter crescentus NA1000 CCNA_03375 RNA polymerase sigma-J factor strong 41 96
o Caulobacter crescentus NA1000 Δfur CCNA_03375 RNA polymerase sigma-J factor cofit 41 96
o Paraburkholderia graminis OAS925 ABIE53_004797 RNA polymerase sigma-70 factor (ECF subfamily) insig. 41 96
o Ralstonia sp. UNC404CL21Col ABZR87_RS05500 RNA polymerase sigma-70 factor strong 39 94
o Burkholderia phytofirmans PsJN BPHYT_RS11635 RNA polymerase subunit sigma-24 insig. 42 95
o Herbaspirillum seropedicae SmR1 HSERO_RS00750 RNA polymerase subunit sigma-24 insig. 39 96
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS01610 RNA polymerase sigma-70 factor insig. 41 97
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01268 RNA polymerase sigma-70 factor, ECF subfamily insig. 40 97
  Lysobacter sp. OAE881 ABIE51_RS11095 RNA polymerase sigma-70 factor insig. 41 95
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00750 RNA polymerase sigma factor SigJ insig. 41 96
o Phaeobacter inhibens DSM 17395 PGA1_c28920 'RNA polymerase sigma factor (sigma-70 family; ECF41 subgroup)' insig. 37 96
o Sinorhizobium meliloti 1021 SM_b20030 RNA polymerase sigma factor SigJ insig. 38 93
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3435 RNA polymerase sigma factor, sigma-70 family insig. 36 96
o Rhodopseudomonas palustris CGA009 TX73_005735 sigma-70 family RNA polymerase sigma factor insig. 38 96
o Rhodanobacter sp. FW510-T8 OKGIIK_03820 RNA polymerase sigma-70 factor, ECF subfamily insig. 39 95
o Rhodanobacter denitrificans MT42 LRK55_RS14775 RNA polymerase sigma factor SigJ insig. 39 96
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS15060 RNA polymerase sigma factor SigJ insig. 39 96
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2880 RNA polymerase sigma factor, sigma-70 family insig. 32 95
o Azospirillum sp. SherDot2 MPMX19_00243 ECF RNA polymerase sigma factor SigJ insig. 35 95
  Paraburkholderia graminis OAS925 ABIE53_003338 RNA polymerase sigma factor (sigma-70 family) strong 39 68
o Mycobacterium tuberculosis H37Rv Rv3328c Probable alternative RNA polymerase sigma factor (fragment) SigJ insig. 33 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS02865 sigma-70 family RNA polymerase sigma factor insig. 33 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04104 RNA polymerase sigma-70 factor, ECF subfamily insig. 39 68
  Burkholderia phytofirmans PsJN BPHYT_RS15835 RNA polymerase subunit sigma24 insig. 41 68
o Magnetospirillum magneticum AMB-1 AMB_RS17600 DNA-directed RNA polymerase specialized sigma subunit cofit 35 88
  Mycobacterium tuberculosis H37Rv Rv1189 Possible alternative RNA polymerase sigma factor SigI no data 28 99
  Variovorax sp. SCN45 GFF6705 hypothetical protein insig. 29 76
  Phaeobacter inhibens DSM 17395 PGA1_c08510 RNA polymerase sigma factor (ECF01 subgroup, ECF20 subgroup) insig. 32 53
  Ralstonia sp. UNC404CL21Col ABZR87_RS16160 sigma-70 family RNA polymerase sigma factor insig. 31 50
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS04270 DNA-directed RNA polymerase sigma-70 factor insig. 32 44
  Ralstonia solanacearum UW163 UW163_RS09400 DNA-directed RNA polymerase sigma-70 factor insig. 32 44
  Acidovorax sp. GW101-3H11 Ac3H11_1193 RNA polymerase ECF-type sigma factor insig. 33 53
  Acidovorax sp. GW101-3H11 Ac3H11_1622 RNA polymerase sigma factor insig. 28 54
  Serratia liquefaciens MT49 IAI46_11745 sigma-70 family RNA polymerase sigma factor no data 31 47
  Pseudomonas fluorescens FW300-N2E3 AO353_04915 RNA polymerase subunit sigma-24 insig. 30 50
  Mycobacterium tuberculosis H37Rv Rv0182c Probable alternative RNA polymerase sigma factor SigG (RNA polymerase ECF type sigma factor) insig. 30 51
  Ralstonia solanacearum PSI07 RPSI07_RS13090 DNA-directed RNA polymerase sigma-70 factor insig. 33 43
  Cupriavidus basilensis FW507-4G11 RR42_RS15915 RNA polymerase subunit sigma-24 insig. 31 49
  Rahnella sp. WP5 EX31_RS16485 sigma-70 family RNA polymerase sigma factor insig. 28 52
  Rhodopseudomonas palustris CGA009 TX73_003315 RNA polymerase sigma factor insig. 30 48
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS06415 RNA polymerase sigma factor insig. 26 56
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_563 RNA polymerase sigma-70 factor insig. 32 46
  Phocaeicola dorei CL03T12C01 ABI39_RS03560 RNA polymerase sigma factor insig. 26 53
  Pseudomonas fluorescens SBW25 PFLU_RS05190 RNA polymerase sigma factor insig. 29 50
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05190 RNA polymerase sigma factor insig. 29 50
  Pseudomonas simiae WCS417 PS417_05120 RNA polymerase subunit sigma-24 insig. 29 50
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09420 RNA polymerase sigma factor sig. 33 48
  Pectobacterium carotovorum WPP14 HER17_RS18100 sigma-70 family RNA polymerase sigma factor cofit 24 53
  Ralstonia solanacearum GMI1000 RS_RS11855 DNA-directed RNA polymerase sigma-70 factor insig. 31 43
  Azospirillum sp. SherDot2 MPMX19_05214 ECF RNA polymerase sigma factor SigE insig. 27 47
  Azospirillum brasilense Sp245 AZOBR_RS23325 RNA polymerase sigma70 insig. 30 53
  Burkholderia phytofirmans PsJN BPHYT_RS22710 XRE family transcriptional regulator sig. 27 50
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09175 RNA polymerase sigma factor sig. 26 53
  Cupriavidus basilensis FW507-4G11 RR42_RS31145 RNA polymerase sigma factor insig. 29 50
  Paraburkholderia graminis OAS925 ABIE53_002674 RNA polymerase sigma factor (sigma-70 family) insig. 29 50
  Mycobacterium tuberculosis H37Rv Rv1221 Alternative RNA polymerase sigma factor SigE insig. 28 47
  Azospirillum sp. SherDot2 MPMX19_03247 putative RNA polymerase sigma factor FecI insig. 31 46
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02732 RNA polymerase sigma-70 factor, ECF subfamily insig. 30 49
  Kangiella aquimarina DSM 16071 B158DRAFT_0930 RNA polymerase sigma factor, sigma-70 family insig. 33 30
  Burkholderia phytofirmans PsJN BPHYT_RS24975 RNA polymerase sigma24 factor strong 28 50
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4951 FIG006045: Sigma factor, ECF subfamily insig. 28 55
  Pseudomonas putida KT2440 PP_0352 RNA polymerase sigma-70 factor, ECF subfamily sig. 28 52
  Cupriavidus basilensis FW507-4G11 RR42_RS05810 RNA polymerase sigma factor insig. 29 53
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1919 RNA polymerase sigma-70 factor insig. 30 49
  Variovorax sp. SCN45 GFF5862 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 26 50
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_118 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 30 47
  Burkholderia phytofirmans PsJN BPHYT_RS20215 RNA polymerase sigma 70 sig. 28 46
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS15455 RNA polymerase sigma factor insig. 26 54
  Bacteroides thetaiotaomicron VPI-5482 BT4571 RNA polymerase ECF-type sigma factor (NCBI ptt file) strong 23 53
  Agrobacterium fabrum C58 Atu1982 sigma factor insig. 36 22
  Paraburkholderia graminis OAS925 ABIE53_005321 RNA polymerase sigma factor (sigma-70 family) sig. 32 50
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.715.1 RNA polymerase sigma factor insig. 30 48
  Escherichia coli BL21 ECD_04159 RNA polymerase sigma-19 factor, fec operon-specific; ECF sigma factor insig. 30 45
  Escherichia coli Nissle 1917 ECOLIN_RS25750 RNA polymerase sigma factor FecI insig. 30 45
  Escherichia coli BW25113 b4293 fecI KpLE2 phage-like element; RNA polymerase, sigma 19 factor (NCBI) strong 30 45
  Escherichia coli ECOR38 HEPCGN_09830 fecI RNA polymerase sigma factor FecI cofit 30 45
  Variovorax sp. SCN45 GFF3817 RNA polymerase sigma factor insig. 38 23
  Pseudomonas sp. RS175 PFR28_02859 putative RNA polymerase sigma factor FecI insig. 30 47
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0726 RNA polymerase sigma factor, sigma-70 family insig. 27 50
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00075 RNA polymerase sigma factor insig. 26 49
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05041 RNA polymerase sigma-70 factor, ECF subfamily insig. 26 54
  Enterobacter asburiae PDN3 EX28DRAFT_2390 RNA polymerase sigma factor, sigma-70 family cofit 37 20
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10790 RNA polymerase sigma factor insig. 31 54
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2440 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 29 47
  Azospirillum brasilense Sp245 AZOBR_RS28490 hypothetical protein sig. 30 48
  Pseudomonas putida KT2440 PP_4608 RNA polymerase sigma-70 factor, ECF subfamily insig. 28 50
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2666 RNA polymerase sigma-70 factor, ECF family insig. 26 49
  Pseudomonas syringae pv. syringae B728a Psyr_4731 Sigma-70 region 2:Sigma-70 region 4 insig. 27 52
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4731 Sigma-70 region 2:Sigma-70 region 4 insig. 27 52
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12885 RNA polymerase insig. 25 49
  Pseudomonas simiae WCS417 PS417_00670 RNA polymerase sigma factor sig. 30 47