Homologs of PP_3400 from Pseudomonas putida KT2440

alpha-ketoglutarate- and Fe(II)-dependent dioxygenase
SEED: Alkylated DNA repair protein AlkB
KEGG: alkylated DNA repair protein

71 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_3400 alpha-ketoglutarate- and Fe(II)-dependent dioxygenase sig. 100 100
o Pseudomonas sp. BP01 JOY50_RS23435 alkB DNA oxidative demethylase AlkB insig. 93 100
o Pseudomonas sp. SVBP6 COO64_RS23215 alkB DNA oxidative demethylase AlkB insig. 68 100
o Rhodanobacter sp. FW510-T8 OKGIIK_07205 alkB DNA oxidative demethylase AlkB insig. 67 97
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS11255 DNA oxidative demethylase AlkB insig. 65 97
o Castellaniella sp019104865 MT123 ABCV34_RS07710 DNA oxidative demethylase AlkB insig. 62 98
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS18105 DNA oxidative demethylase AlkB sig. 66 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5023 Alkylated DNA repair protein AlkB insig. 59 95
o Variovorax sp. SCN45 GFF782 Alpha-ketoglutarate-dependent dioxygenase AlkB (EC 1.14.11.33) insig. 64 99
o Pseudomonas sp. DMC3 GFF2952 Alpha-ketoglutarate-dependent dioxygenase AlkB insig. 60 93
o Ralstonia solanacearum PSI07 RPSI07_RS12045 DNA oxidative demethylase AlkB insig. 66 93
o Pseudomonas fluorescens FW300-N2E3 AO353_27010 alpha-ketoglutarate-dependent dioxygenase insig. 58 98
o Pseudomonas syringae pv. syringae B728a Psyr_2985 DNA-N1-methyladenine dioxygenase insig. 60 97
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2985 DNA-N1-methyladenine dioxygenase insig. 60 97
o Ralstonia sp. UNC404CL21Col ABZR87_RS00890 DNA oxidative demethylase AlkB insig. 62 93
o Rhodopseudomonas palustris CGA009 TX73_008860 DNA oxidative demethylase AlkB insig. 60 96
o Pseudomonas sp. RS175 PFR28_02492 Alpha-ketoglutarate-dependent dioxygenase AlkB insig. 56 97
o Pseudomonas fluorescens SBW25 PFLU_RS14510 DNA oxidative demethylase AlkB insig. 59 93
o Pseudomonas fluorescens SBW25-INTG PFLU_RS14510 DNA oxidative demethylase AlkB insig. 59 93
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2915 Alkylated DNA repair protein AlkB insig. 59 95
o Rhodanobacter denitrificans MT42 LRK55_RS17960 DNA oxidative demethylase AlkB insig. 63 100
o Pseudomonas fluorescens FW300-N2C3 AO356_22760 alpha-ketoglutarate-dependent dioxygenase insig. 57 97
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_437 Alkylated DNA repair protein AlkB insig. 59 94
o Marinobacter adhaerens HP15 HP15_1028 alkylated DNA repair protein AlkB cofit 56 96
o Ralstonia solanacearum GMI1000 RS_RS12875 DNA oxidative demethylase AlkB insig. 66 93
o Pseudomonas simiae WCS417 PS417_14100 alpha-ketoglutarate-dependent dioxygenase insig. 59 93
o Dechlorosoma suillum PS Dsui_3098 alkylated DNA repair protein no data 62 99
o Rahnella sp. WP5 EX31_RS03140 DNA oxidative demethylase AlkB insig. 58 93
o Dickeya dadantii 3937 DDA3937_RS04560 DNA oxidative demethylase AlkB insig. 57 97
o Variovorax sp. OAS795 ABID97_RS24835 DNA oxidative demethylase AlkB insig. 66 91
o Dickeya dianthicola ME23 DZA65_RS04440 DNA oxidative demethylase AlkB insig. 56 97
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS05255 DNA oxidative demethylase AlkB insig. 64 93
o Ralstonia solanacearum UW163 UW163_RS08370 DNA oxidative demethylase AlkB insig. 64 93
o Serratia liquefaciens MT49 IAI46_16945 DNA oxidative demethylase AlkB insig. 57 97
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1826 Alkylated DNA repair protein AlkB sig. 54 97
o Pectobacterium carotovorum WPP14 HER17_RS17090 DNA oxidative demethylase AlkB insig. 57 98
o Enterobacter asburiae PDN3 EX28DRAFT_0364 Alkylated DNA repair protein insig. 56 98
o Escherichia coli BL21 ECD_02139 oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions insig. 54 97
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01498 Alpha-ketoglutarate-dependent dioxygenase AlkB insig. 54 97
o Escherichia fergusonii Becca EFB2_01643 Alpha-ketoglutarate-dependent dioxygenase AlkB insig. 53 97
o Escherichia coli ECRC100 OKFHMN_23215 alkB DNA oxidative demethylase AlkB cofit 53 97
o Escherichia coli ECRC101 MCAODC_14265 alkB DNA oxidative demethylase AlkB insig. 53 97
o Escherichia coli ECRC102 NIAGMN_20980 alkB DNA oxidative demethylase AlkB insig. 53 97
o Escherichia coli ECRC98 JDDGAC_27175 alkB DNA oxidative demethylase AlkB cofit 53 97
o Escherichia coli ECRC99 KEDOAH_04970 alkB DNA oxidative demethylase AlkB no data 53 97
  Escherichia coli Nissle 1917 ECOLIN_RS12920 DNA oxidative demethylase AlkB no data 53 97
o Escherichia coli Nissle 1917 ECOLIN_RS26540 DNA oxidative demethylase AlkB no data 53 97
o Dickeya dianthicola 67-19 HGI48_RS04520 DNA oxidative demethylase AlkB insig. 56 97
o Enterobacter sp. TBS_079 MPMX20_03172 Alpha-ketoglutarate-dependent dioxygenase AlkB insig. 57 97
o Escherichia coli BW25113 b2212 alkB oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions (NCBI) sig. 53 97
o Acidovorax sp. GW101-3H11 Ac3H11_2181 Alkylated DNA repair protein AlkB insig. 59 93
o Cupriavidus basilensis FW507-4G11 RR42_RS23540 alpha-ketoglutarate-dependent dioxygenase insig. 60 97
o Escherichia coli ECOR38 HEPCGN_22480 alkB DNA oxidative demethylase AlkB insig. 53 97
o Erwinia amylovora T8 OLJFJH_11600 DNA oxidative demethylase AlkB insig. 54 97
o Pantoea sp. MT58 IAI47_06530 DNA oxidative demethylase AlkB insig. 55 97
o Escherichia coli ECOR27 NOLOHH_14790 alkB DNA oxidative demethylase AlkB cofit 52 97
o Escherichia coli ECRC62 BNILDI_13710 alkB DNA oxidative demethylase AlkB cofit 52 97
o Klebsiella michiganensis M5al BWI76_RS19890 alpha-ketoglutarate-dependent dioxygenase AlkB sig. 53 97
o Herbaspirillum seropedicae SmR1 HSERO_RS08355 dioxygenase insig. 55 96
o Methylophilus sp. DMC18 GFF2269 Alpha-ketoglutarate-dependent dioxygenase AlkB insig. 54 97
o Rhizobium sp. OAE497 ABIE40_RS19425 alpha-ketoglutarate-dependent dioxygenase AlkB insig. 45 86
o Bosea sp. OAE506 ABIE41_RS00230 alpha-ketoglutarate-dependent dioxygenase AlkB insig. 47 92
o Xanthobacter sp. DMC5 GFF2237 Alpha-ketoglutarate-dependent dioxygenase AlkB insig. 48 85
o Dinoroseobacter shibae DFL-12 Dshi_3572 2OG-Fe(II) oxygenase (RefSeq) sig. 47 85
o Caulobacter crescentus NA1000 CCNA_00009 alkylated DNA repair protein AlkB insig. 43 92
o Caulobacter crescentus NA1000 Δfur CCNA_00009 alkylated DNA repair protein AlkB cofit 43 92
o Phaeobacter inhibens DSM 17395 PGA1_c34520 alpha-ketoglutarate-dependent dioxygenase AlkB insig. 41 92
o Sinorhizobium meliloti 1021 SMc02566 alkylated DNA repair protein insig. 44 88
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13625 alpha-ketoglutarate-dependent dioxygenase AlkB insig. 45 80
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4470.1 Alkylated DNA repair protein AlkB insig. 36 67
  Shewanella loihica PV-4 Shew_2885 2OG-Fe(II) oxygenase (RefSeq) insig. 30 59