Homologs of PP_2054 from Pseudomonas putida KT2440

putative DNA-binding transcriptional regulator
SEED: LysR family transcriptional regulator clustered with dicarboxylate transport

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_2054 putative DNA-binding transcriptional regulator sig. 100 100
o Pseudomonas sp. BP01 JOY50_RS22305 LysR family transcriptional regulator insig. 99 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4462 LysR family transcriptional regulator YbhD insig. 90 100
o Pseudomonas fluorescens FW300-N2C3 AO356_28895 LysR family transcriptional regulator insig. 89 100
o Pseudomonas sp. RS175 PFR28_01942 HTH-type transcriptional regulator CynR strong 88 100
o Pseudomonas fluorescens SBW25 PFLU_RS14945 LysR family transcriptional regulator insig. 88 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS14945 LysR family transcriptional regulator strong 88 99
o Pseudomonas sp. SVBP6 COO64_RS20555 LysR family transcriptional regulator insig. 88 99
o Dickeya dadantii 3937 DDA3937_RS07805 LysR family transcriptional regulator insig. 65 100
o Azospirillum brasilense Sp245 AZOBR_RS28100 LysR family transcriptional regulator insig. 58 99
o Azospirillum sp. SherDot2 MPMX19_03557 HTH-type transcriptional regulator CynR insig. 57 99
o Acidovorax sp. GW101-3H11 Ac3H11_4371 LysR family transcriptional regulator YbhD insig. 55 98
o Agrobacterium fabrum C58 Atu4264 LysR family transcriptional regulator strong 54 99
o Escherichia coli ECOR27 NOLOHH_23100 ybhD Uncharacterized HTH-type transcriptional regulator YbhD insig. 52 99
o Escherichia coli ECRC100 OKFHMN_06670 ybhD Uncharacterized HTH-type transcriptional regulator YbhD insig. 52 99
o Escherichia coli BW25113 b0768 ybhD predicted DNA-binding transcriptional regulator (RefSeq) insig. 52 99
o Escherichia fergusonii Becca EFB2_03338 Hydrogen peroxide-inducible genes activator insig. 52 99
o Escherichia coli ECOR38 HEPCGN_01605 ybhD Uncharacterized HTH-type transcriptional regulator YbhD insig. 52 99
o Escherichia coli ECRC101 MCAODC_25890 ybhD Uncharacterized HTH-type transcriptional regulator YbhD insig. 52 99
o Escherichia coli ECRC102 NIAGMN_04720 ybhD Uncharacterized HTH-type transcriptional regulator YbhD insig. 52 99
o Escherichia coli ECRC62 BNILDI_21095 ybhD Uncharacterized HTH-type transcriptional regulator YbhD insig. 52 99
o Escherichia coli ECRC98 JDDGAC_10325 ybhD Uncharacterized HTH-type transcriptional regulator YbhD insig. 52 99
o Escherichia coli ECRC99 KEDOAH_21295 ybhD Uncharacterized HTH-type transcriptional regulator YbhD no data 52 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02945 Hydrogen peroxide-inducible genes activator insig. 52 99
o Escherichia coli Nissle 1917 ECOLIN_RS04090 LysR family transcriptional regulator no data 52 99
o Burkholderia phytofirmans PsJN BPHYT_RS27430 LysR family transcriptional regulator insig. 53 96
o Ralstonia sp. UNC404CL21Col ABZR87_RS08345 LysR family transcriptional regulator insig. 53 98
  Pseudomonas fluorescens SBW25 PFLU_RS07335 LysR family transcriptional regulator insig. 53 95
  Pseudomonas fluorescens SBW25-INTG PFLU_RS07335 LysR family transcriptional regulator insig. 53 95
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01591 Hydrogen peroxide-inducible genes activator cofit 53 95
o Paraburkholderia graminis OAS925 ABIE53_005445 DNA-binding transcriptional LysR family regulator insig. 52 98
o Klebsiella michiganensis M5al BWI76_RS04365 LysR family transcriptional regulator insig. 51 99
o Pseudomonas simiae WCS417 PS417_07220 LysR family transcriptional regulator insig. 53 95
o Pseudomonas orientalis W4I3 QF045_RS09925 LysR family transcriptional regulator insig. 52 95
o Cupriavidus basilensis FW507-4G11 RR42_RS23045 LysR family transcriptional regulator insig. 53 100
  Cupriavidus basilensis FW507-4G11 RR42_RS28580 LysR family transcriptional regulator insig. 51 100
o Pseudomonas syringae pv. syringae B728a Psyr_3165 transcriptional regulator, LysR family insig. 48 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3165 transcriptional regulator, LysR family insig. 48 100
  Paraburkholderia graminis OAS925 ABIE53_006109 DNA-binding transcriptional LysR family regulator insig. 50 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03335 transcriptional regulator, LysR family insig. 54 96
o Pseudomonas sp. DMC3 GFF1584 Hydrogen peroxide-inducible genes activator cofit 52 95
o Pseudomonas fluorescens FW300-N2E3 AO353_26720 LysR family transcriptional regulator insig. 51 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS11315 LysR family transcriptional regulator insig. 53 98
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2179 LysR family transcriptional regulator YbhD insig. 48 96
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS05995 LysR family transcriptional regulator cofit 44 99
  Ralstonia sp. UNC404CL21Col ABZR87_RS04670 LysR family transcriptional regulator insig. 47 95
o Pantoea sp. MT58 IAI47_10140 LysR family transcriptional regulator insig. 43 99
  Burkholderia phytofirmans PsJN BPHYT_RS09930 LysR family transcriptional regulator insig. 44 99
o Enterobacter sp. TBS_079 MPMX20_02971 HTH-type transcriptional regulator CynR insig. 45 93
o Enterobacter asburiae PDN3 EX28DRAFT_0581 Transcriptional regulator insig. 44 93
o Klebsiella pneumoniae MKP103 KDGMDA_24900 LysR family transcriptional regulator insig. 42 100
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3058 LysR family transcriptional regulator YbhD insig. 45 97
o Variovorax sp. SCN45 GFF2416 Transcriptional regulator YbhD, LysR family insig. 44 98
o Herbaspirillum seropedicae SmR1 HSERO_RS12040 LysR family transcriptional regulator insig. 42 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS38040 LysR family transcriptional regulator insig. 43 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02618 transcriptional regulator, LysR family insig. 43 98
o Bosea sp. OAE506 ABIE41_RS16550 LysR family transcriptional regulator insig. 41 96
  Herbaspirillum seropedicae SmR1 HSERO_RS07340 LysR family transcriptional regulator insig. 39 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS23130 LysR family transcriptional regulator insig. 38 100
  Burkholderia phytofirmans PsJN BPHYT_RS08035 LysR family transcriptional regulator insig. 38 100
  Cupriavidus basilensis FW507-4G11 RR42_RS03425 LysR family transcriptional regulator insig. 39 95
o Rahnella sp. WP5 EX31_RS20145 LysR family transcriptional regulator insig. 37 99
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03809 transcriptional regulator, LysR family insig. 35 99
o Variovorax sp. OAS795 ABID97_RS05470 LysR family transcriptional regulator no data 40 97
o Sinorhizobium meliloti 1021 SM_b20123 transcriptional regulator insig. 36 98
  Paraburkholderia graminis OAS925 ABIE53_004438 DNA-binding transcriptional LysR family regulator insig. 35 99
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS17035 LysR family transcriptional regulator insig. 38 95
  Klebsiella michiganensis M5al BWI76_RS20610 LysR family transcriptional regulator insig. 37 98
  Variovorax sp. SCN45 GFF885 Transcriptional regulator, LysR family insig. 38 97
  Acidovorax sp. GW101-3H11 Ac3H11_2899 Probable LysR-family transcriptional regulator insig. 37 96
  Paraburkholderia graminis OAS925 ABIE53_001823 DNA-binding transcriptional LysR family regulator insig. 38 100
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF17 LysR family transcriptional regulator YfeR insig. 38 96
  Pseudomonas sp. RS175 PFR28_01830 HTH-type transcriptional regulator CynR insig. 37 98
o Serratia liquefaciens MT49 IAI46_18415 LysR family transcriptional regulator insig. 37 98
o Erwinia amylovora T8 OLJFJH_10895 LysR family transcriptional regulator insig. 36 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS31250 LysR family transcriptional regulator insig. 35 98
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05098 DNA-binding transcriptional regulator, LysR family insig. 37 100
  Klebsiella pneumoniae MKP103 KDGMDA_27455 LysR family transcriptional regulator insig. 36 100
  Azospirillum sp. SherDot2 MPMX19_02886 HTH-type transcriptional regulator CynR insig. 36 96
  Variovorax sp. SCN45 GFF6826 Transcriptional regulator, LysR family no data 37 100
  Variovorax sp. OAS795 ABID97_RS11710 LysR substrate-binding domain-containing protein no data 39 97
  Enterobacter sp. TBS_079 MPMX20_03302 HTH-type transcriptional regulator CynR insig. 37 98
  Variovorax sp. SCN45 GFF6064 Transcriptional regulator YfeR, LysR family no data 37 98
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS05100 LysR family transcriptional regulator insig. 38 96
o Ralstonia solanacearum UW163 UW163_RS08525 LysR family transcriptional regulator insig. 38 96
o Ralstonia solanacearum PSI07 RPSI07_RS12195 LysR family transcriptional regulator insig. 38 96
  Burkholderia phytofirmans PsJN BPHYT_RS20345 LysR family transcriptional regulator insig. 34 99
  Pseudomonas sp. SVBP6 COO64_RS07690 LysR family transcriptional regulator insig. 36 97
  Pseudomonas fluorescens FW300-N2E3 AO353_27930 LysR family transcriptional regulator strong 36 96
o Ralstonia solanacearum GMI1000 RS_RS12720 LysR family transcriptional regulator insig. 38 96
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2038 LysR family transcriptional regulator YfeR insig. 35 98
  Cupriavidus basilensis FW507-4G11 RR42_RS21140 LysR family transcriptional regulator insig. 39 98
  Pantoea sp. MT58 IAI47_05470 LysR family transcriptional regulator insig. 35 96
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS20015 LysR family transcriptional regulator cofit 35 96
  Variovorax sp. OAS795 ABID97_RS27955 LysR family transcriptional regulator insig. 35 98
  Pseudomonas syringae pv. syringae B728a Psyr_3236 transcriptional regulator, LysR family strong 35 98
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3236 transcriptional regulator, LysR family insig. 35 98
  Variovorax sp. SCN45 GFF6267 Transcriptional regulator, LysR family no data 35 96
  Pseudomonas simiae WCS417 PS417_19375 LysR family transcriptional regulator insig. 34 100
  Cupriavidus basilensis FW507-4G11 RR42_RS31055 3-hydroxybutyryl-CoA dehydrogenase insig. 33 98