Homologs of MIT1002_01728 from Alteromonas macleodii MIT1002

hypothetical protein
SEED: COG1399 protein, clustered with ribosomal protein L32p
KEGG: uncharacterized protein

62 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Alteromonas macleodii MIT1002 MIT1002_01728 hypothetical protein no data 100 100
o Erwinia tracheiphila SCR3 LU632_RS14845 yceD 23S rRNA accumulation protein YceD insig. 48 94
o Dickeya dadantii 3937 DDA3937_RS13145 23S rRNA accumulation protein YceD strong 49 94
o Dickeya dianthicola 67-19 HGI48_RS13210 23S rRNA accumulation protein YceD insig. 48 94
o Rahnella sp. WP5 EX31_RS24410 23S rRNA accumulation protein YceD cofit 47 94
o Dickeya dianthicola ME23 DZA65_RS13680 23S rRNA accumulation protein YceD no data 48 94
o Pantoea sp. MT58 IAI47_12095 23S rRNA accumulation protein YceD no data 49 94
o Pectobacterium carotovorum WPP14 HER17_RS08625 23S rRNA accumulation protein YceD insig. 47 94
o Escherichia coli BL21 ECD_01084 DUF177 family protein strong 45 94
o Escherichia fergusonii Becca EFB2_02887 Large ribosomal RNA subunit accumulation protein YceD strong 45 94
o Escherichia coli ECOR27 NOLOHH_21130 yceD 23S rRNA accumulation protein YceD cofit 45 94
o Escherichia coli ECOR38 HEPCGN_23880 yceD 23S rRNA accumulation protein YceD strong 45 94
o Escherichia coli ECRC100 OKFHMN_03600 yceD 23S rRNA accumulation protein YceD cofit 45 94
o Escherichia coli ECRC101 MCAODC_22960 yceD 23S rRNA accumulation protein YceD cofit 45 94
o Escherichia coli ECRC102 NIAGMN_24230 yceD 23S rRNA accumulation protein YceD insig. 45 94
o Escherichia coli ECRC62 BNILDI_19290 yceD 23S rRNA accumulation protein YceD strong 45 94
o Escherichia coli ECRC98 JDDGAC_07260 yceD 23S rRNA accumulation protein YceD strong 45 94
o Escherichia coli ECRC99 KEDOAH_24155 yceD 23S rRNA accumulation protein YceD no data 45 94
o Escherichia coli Nissle 1917 ECOLIN_RS06290 23S rRNA accumulation protein YceD cofit 45 94
o Escherichia coli BW25113 b1088 yceD hypothetical protein (NCBI) strong 45 94
o Enterobacter sp. TBS_079 MPMX20_01768 Large ribosomal RNA subunit accumulation protein YceD sig. 47 94
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02578 Large ribosomal RNA subunit accumulation protein YceD insig. 45 94
o Enterobacter asburiae PDN3 EX28DRAFT_1841 Predicted metal-binding, possibly nucleic acid-binding protein insig. 46 94
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3370 COG1399 protein, clustered with ribosomal protein L32p cofit 45 94
o Serratia liquefaciens MT49 IAI46_09765 23S rRNA accumulation protein YceD no data 47 94
o Klebsiella michiganensis M5al BWI76_RS11065 hypothetical protein no data 44 94
o Shewanella oneidensis MR-1 SO2781 conserved hypothetical protein (NCBI ptt file) no data 43 94
o Shewanella sp. ANA-3 Shewana3_2563 hypothetical protein (RefSeq) no data 42 94
o Shewanella loihica PV-4 Shew_1598 hypothetical protein (RefSeq) no data 42 94
o Vibrio cholerae E7946 ATCC 55056 CSW01_10120 23S rRNA accumulation protein YceD no data 42 94
o Shewanella amazonensis SB2B Sama_1985 hypothetical protein (RefSeq) no data 40 94
o Pseudomonas stutzeri RCH2 Psest_1684 Predicted metal-binding, possibly nucleic acid-binding protein no data 35 95
o Pseudomonas sp. RS175 PFR28_03014 Large ribosomal RNA subunit accumulation protein YceD no data 33 92
o Pseudomonas putida KT2440 PP_1910 conserved protein of unknown function no data 34 92
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_455 COG1399 protein, clustered with ribosomal protein L32p no data 33 92
o Pseudomonas fluorescens FW300-N2E3 AO353_01385 metal-binding protein no data 33 92
o Pseudomonas fluorescens SBW25 PFLU_RS23075 hypothetical protein insig. 34 92
o Pseudomonas fluorescens SBW25-INTG PFLU_RS23075 hypothetical protein no data 34 92
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2101 COG1399 protein, clustered with ribosomal protein L32p no data 33 92
o Pseudomonas simiae WCS417 PS417_21460 metal-binding protein no data 33 92
o Pseudomonas fluorescens FW300-N2C3 AO356_20145 metal-binding protein no data 32 92
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5948 COG1399 protein, clustered with ribosomal protein L32p no data 32 92
o Marinobacter adhaerens HP15 HP15_2217 protein containing DUF177 no data 33 95
o Pseudomonas syringae pv. syringae B728a Psyr_1643 Protein of unknown function DUF177 no data 32 92
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1643 Protein of unknown function DUF177 no data 32 92
  Pseudomonas sp. S08-1 OH686_22120 protein, clustered with ribosomal protein L32p no data 38 57
o Lysobacter sp. OAE881 ABIE51_RS13965 YceD family protein no data 26 91
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4000.1 COG1399 protein, clustered with ribosomal protein L32p insig. 27 92
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS06190 YceD family protein cofit 28 93
  Acidovorax sp. GW101-3H11 Ac3H11_1583 COG1399 protein, clustered with ribosomal protein L32p cofit 32 70
o Dechlorosoma suillum PS Dsui_2443 putative metal-binding protein, possibly nucleic-acid binding protein insig. 27 81
o Rhodanobacter sp. FW510-T8 OKGIIK_05695 Large ribosomal RNA subunit accumulation protein YceD insig. 29 84
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS01205 YceD family protein no data 28 84
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03835 hypothetical protein insig. 28 75
  Variovorax sp. OAS795 ABID97_RS08285 DUF177 domain-containing protein no data 32 59
  Rhodanobacter denitrificans MT42 LRK55_RS00980 YceD family protein no data 28 84
  Kangiella aquimarina DSM 16071 B158DRAFT_1758 Predicted metal-binding, possibly nucleic acid-binding protein strong 29 95
  Herbaspirillum seropedicae SmR1 HSERO_RS09580 DNA-binding protein no data 26 82
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3330 COG1399 protein, clustered with ribosomal protein L32p no data 30 62
  Castellaniella sp019104865 MT123 ABCV34_RS08395 YceD family protein insig. 32 64
  Variovorax sp. SCN45 GFF3854 FIG01269488: protein, clustered with ribosomal protein L32p insig. 25 65
  Ralstonia solanacearum GMI1000 RS_RS05185 metal-binding protein insig. 32 57