Homologs of LRK55_RS05220 from Rhodanobacter denitrificans MT42

EAL domain-containing protein
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhodanobacter denitrificans MT42 LRK55_RS05220 EAL domain-containing protein insig. 100 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS05445 EAL domain-containing protein insig. 100 100
o Rhodanobacter sp. FW510-T8 OKGIIK_01360 Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain insig. 91 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS18930 EAL domain-containing protein insig. 75 99
o Lysobacter sp. OAE881 ABIE51_RS13765 EAL domain-containing protein sig. 50 85
  Rhodanobacter denitrificans MT42 LRK55_RS10715 EAL domain-containing protein insig. 46 90
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS11010 EAL domain-containing protein insig. 46 90
  Rhodanobacter sp. FW510-T8 OKGIIK_12865 Diguanylate cyclase insig. 46 89
o Paraburkholderia sabiae LMG 24235 QEN71_RS13125 EAL domain-containing protein insig. 41 85
o Alteromonas macleodii MIT1002 MIT1002_00072 Bacteriophytochrome cph2 strong 37 85
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01564 diguanylate cyclase/phosphodiesterase insig. 40 91
o Paraburkholderia graminis OAS925 ABIE53_001117 diguanylate cyclase (GGDEF)-like protein insig. 41 86
o Pseudomonas syringae pv. syringae B728a Psyr_2432 diguanylate cyclase/phosphodiesterase insig. 39 90
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2432 diguanylate cyclase/phosphodiesterase insig. 39 90
o Shewanella loihica PV-4 Shew_0306 diguanylate cyclase/phosphodiesterase with GAF sensor (RefSeq) cofit 34 87
  Shewanella oneidensis MR-1 SO4324 GGDEF domain protein (NCBI ptt file) insig. 33 87
  Shewanella sp. ANA-3 Shewana3_0375 diguanylate cyclase/phosphodiesterase with GAF sensor (RefSeq) insig. 33 86
  Desulfovibrio vulgaris Hildenborough JW710 DVU2432 sensory box/GGDEF domain/EAL domain protein (TIGR) insig. 37 66
  Shewanella amazonensis SB2B Sama_3265 GGDEF domain-containing protein (RefSeq) insig. 34 84
  Desulfovibrio vulgaris Miyazaki F DvMF_2963 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 36 65
  Synechococcus elongatus PCC 7942 Synpcc7942_1158 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) insig. 42 44
  Desulfovibrio vulgaris Miyazaki F DvMF_0211 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) sig. 46 43
  Azospirillum brasilense Sp245 AZOBR_RS19995 Diguanylate cyclase/phosphodiesterase with PAS/PAC domain strong 44 45
  Desulfovibrio vulgaris Hildenborough JW710 DVU1190 sensory box/GGDEF domain/EAL domain protein (TIGR) sig. 43 45
  Desulfovibrio vulgaris Hildenborough JW710 DVU1414 sensory box/GGDEF domain/EAL domain protein (TIGR) insig. 44 44
  Magnetospirillum magneticum AMB-1 AMB_RS18310 bifunctional diguanylate cyclase/phosphodiesterase cofit 42 45
  Pseudomonas simiae WCS417 PS417_24275 diguanylate phosphodiesterase strong 42 45
  Rhodopseudomonas palustris CGA009 TX73_004010 EAL domain-containing protein insig. 42 45
  Pseudomonas fluorescens FW300-N2E3 AO353_14025 diguanylate phosphodiesterase strong 42 45
  Rhodopseudomonas palustris CGA009 TX73_002030 EAL domain-containing protein insig. 42 45
  Pseudomonas syringae pv. syringae B728a Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 42 45
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 42 45
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2779 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 42 45
  Desulfovibrio vulgaris Miyazaki F DvMF_3083 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 41 44
  Dechlorosoma suillum PS Dsui_3104 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein strong 44 45
  Dechlorosoma suillum PS Dsui_0262 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 42 45
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1452 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 41 45
  Pseudomonas fluorescens FW300-N2C3 AO356_15730 diguanylate phosphodiesterase insig. 42 45
  Pseudomonas sp. RS175 PFR28_03785 hypothetical protein insig. 41 45
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5083 Serine hydroxymethyltransferase (EC 2.1.2.1) sig. 42 45
  Dechlorosoma suillum PS Dsui_1011 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 42 43
  Pseudomonas fluorescens SBW25 PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase cofit 41 45
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase sig. 41 45
  Acidovorax sp. GW101-3H11 Ac3H11_1143 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 41 46
  Rhodopseudomonas palustris CGA009 TX73_017630 EAL domain-containing protein insig. 43 45
  Acidovorax sp. GW101-3H11 Ac3H11_4268 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 42 45
  Azospirillum sp. SherDot2 MPMX19_01476 hypothetical protein insig. 41 44
  Pseudomonas syringae pv. syringae B728a Psyr_1159 PAS:GGDEF insig. 39 47
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1159 PAS:GGDEF insig. 39 47
  Shewanella loihica PV-4 Shew_3428 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 39 44
  Azospirillum sp. SherDot2 MPMX19_06128 hypothetical protein insig. 43 45
  Pseudomonas sp. S08-1 OH686_16235 Sensory box/GGDEF family protein insig. 41 45
  Pseudomonas putida KT2440 PP_0672 Sensory box protein sig. 41 45
  Desulfovibrio vulgaris Hildenborough JW710 DVU3064 sensory box/GGDEF domain/EAL domain protein (TIGR) insig. 38 50
  Dechlorosoma suillum PS Dsui_2160 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 42 45
  Shewanella sp. ANA-3 Shewana3_3829 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 41 44
  Dechlorosoma suillum PS Dsui_1564 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 42 45
  Shewanella oneidensis MR-1 SO0341 sensory box protein (NCBI ptt file) insig. 41 44
  Shewanella sp. ANA-3 Shewana3_0429 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 39 44
  Marinobacter adhaerens HP15 HP15_1500 sensory box/GGDEF family protein insig. 40 46
  Marinobacter adhaerens HP15 HP15_806 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 40 45
  Shewanella sp. ANA-3 Shewana3_2929 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 41 45
  Shewanella amazonensis SB2B Sama_3298 sensory box protein (RefSeq) insig. 40 45
  Pseudomonas stutzeri RCH2 Psest_0263 PAS domain S-box/diguanylate cyclase (GGDEF) domain sig. 43 43
  Shewanella oneidensis MR-1 SO0427 sensory box protein (NCBI ptt file) sig. 39 45
  Shewanella oneidensis MR-1 SO1500 sensory box protein (NCBI ptt file) strong 42 46
  Desulfovibrio vulgaris Hildenborough JW710 DVU0717 GGDEF domain/EAL domain protein (TIGR) insig. 41 46
  Dechlorosoma suillum PS Dsui_2365 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 40 46
  Rhodospirillum rubrum S1H Rru_A3137 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) insig. 41 45
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS21640 GGDEF domain-containing protein insig. 43 45
  Ralstonia solanacearum UW163 UW163_RS17545 GGDEF domain-containing protein insig. 43 45
  Caulobacter crescentus NA1000 CCNA_03191 PAS-family GGDEF/EAL family protein cofit 39 46
  Caulobacter crescentus NA1000 Δfur CCNA_03191 PAS-family GGDEF/EAL family protein cofit 39 46
  Synechococcus elongatus PCC 7942 Synpcc7942_1859 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 38 45
  Magnetospirillum magneticum AMB-1 AMB_RS06165 CBS domain-containing protein insig. 40 44
  Magnetospirillum magneticum AMB-1 AMB_RS11515 DUF3365 domain-containing protein insig. 40 45
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 39 45
  Ralstonia solanacearum GMI1000 RS_RS18985 GGDEF domain-containing protein insig. 43 45
  Pseudomonas syringae pv. syringae B728a Psyr_4493 PAS:GGDEF insig. 39 44
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4493 PAS:GGDEF cofit 39 44
  Shewanella amazonensis SB2B Sama_0378 sensory box protein (RefSeq) sig. 40 44
  Pseudomonas sp. S08-1 OH686_00995 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 40 45
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS12250 diguanylate cyclase insig. 43 44
  Ralstonia solanacearum UW163 UW163_RS01355 diguanylate cyclase insig. 43 44
  Ralstonia solanacearum PSI07 RPSI07_RS21070 PAS domain S-box protein insig. 42 44
  Synechococcus elongatus PCC 7942 Synpcc7942_1716 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) strong 42 45
  Pantoea sp. MT58 IAI47_03300 EAL domain-containing protein insig. 39 46
  Ralstonia solanacearum PSI07 RPSI07_RS01485 GGDEF domain-containing protein insig. 42 45
  Ralstonia solanacearum GMI1000 RS_RS02945 PAS domain S-box protein insig. 42 44
  Pseudomonas syringae pv. syringae B728a Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 41 44
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 41 44
  Alteromonas macleodii MIT1002 MIT1002_01199 Bacteriophytochrome cph2 insig. 39 48
  Paraburkholderia sabiae LMG 24235 QEN71_RS30040 EAL domain-containing protein insig. 42 46
  Ralstonia sp. UNC404CL21Col ABZR87_RS22185 EAL domain-containing protein insig. 42 45
  Pseudomonas fluorescens FW300-N2C3 AO356_14260 diguanylate cyclase insig. 42 44
  Pseudomonas fluorescens FW300-N2E3 AO353_07390 diguanylate cyclase insig. 41 45
  Pseudomonas sp. S08-1 OH686_03710 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) cofit 41 45
  Pseudomonas simiae WCS417 PS417_00920 diguanylate cyclase strong 42 44
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2512 sensory box/GGDEF domain/EAL domain protein insig. 41 45
  Shewanella loihica PV-4 Shew_0041 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) strong 41 45