Homologs of LRK54_RS15825 from Rhodanobacter denitrificans FW104-10B01

GGDEF domain-containing protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS15825 GGDEF domain-containing protein cofit 100 100
o Rhodanobacter denitrificans MT42 LRK55_RS15580 GGDEF domain-containing protein insig. 100 100
  Rhodanobacter sp. FW510-T8 OKGIIK_04450 Diguanylate cyclase insig. 50 94
  Rhodanobacter denitrificans MT42 LRK55_RS15570 GGDEF domain-containing protein cofit 49 98
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS15815 GGDEF domain-containing protein cofit 49 98
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS16165 diguanylate cyclase insig. 45 93
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS15495 GGDEF domain-containing protein insig. 37 96
  Rhodanobacter denitrificans MT42 LRK55_RS15215 GGDEF domain-containing protein insig. 39 94
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS15495 GGDEF domain-containing protein insig. 39 94
  Rhodanobacter sp. FW510-T8 OKGIIK_04235 Diguanylate cyclase insig. 38 97
  Shewanella loihica PV-4 Shew_3000 diguanylate cyclase (RefSeq) insig. 32 93
  Shewanella amazonensis SB2B Sama_0783 GGDEF domain-containing protein (RefSeq) insig. 28 97
  Kangiella aquimarina DSM 16071 B158DRAFT_0040 diguanylate cyclase (GGDEF) domain insig. 29 91
  Shewanella loihica PV-4 Shew_1274 diguanylate cyclase (RefSeq) sig. 26 98
  Shewanella sp. ANA-3 Shewana3_2946 diguanylate cyclase (RefSeq) cofit 27 90
  Shewanella oneidensis MR-1 SO1480 GGDEF family protein (NCBI ptt file) insig. 25 97
  Magnetospirillum magneticum AMB-1 AMB_RS17460 PAS domain S-box protein cofit 47 28
  Dechlorosoma suillum PS Dsui_2893 diguanylate cyclase (GGDEF) domain-containing protein cofit 37 34
  Acidovorax sp. GW101-3H11 Ac3H11_3345 hypothetical protein insig. 36 38
  Magnetospirillum magneticum AMB-1 AMB_RS23665 GGDEF domain-containing protein insig. 40 29
  Kangiella aquimarina DSM 16071 B158DRAFT_0954 diguanylate cyclase (GGDEF) domain insig. 40 28
  Rhodanobacter sp. FW510-T8 OKGIIK_09270 Diguanylate cyclase insig. 42 30
  Synechococcus elongatus PCC 7942 Synpcc7942_1811 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor sig. 39 30
  Pseudomonas fluorescens SBW25 PFLU_RS13490 sensor domain-containing diguanylate cyclase insig. 40 29
  Pseudomonas fluorescens SBW25-INTG PFLU_RS13490 sensor domain-containing diguanylate cyclase insig. 40 29
  Shewanella amazonensis SB2B Sama_2382 GGDEF family protein (RefSeq) insig. 26 77
  Pseudomonas putida KT2440 PP_3348 GGDEF domain protein sig. 41 31
  Desulfovibrio vulgaris Miyazaki F DvMF_1477 diguanylate cyclase with PAS/PAC sensor (RefSeq) sig. 41 31
  Rhodanobacter denitrificans MT42 LRK55_RS17540 ligand-binding sensor domain-containing diguanylate cyclase insig. 44 28
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS17315 ligand-binding sensor domain-containing diguanylate cyclase insig. 44 28
  Rhodanobacter denitrificans MT42 LRK55_RS01975 GGDEF domain-containing protein insig. 43 29
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02220 GGDEF domain-containing protein insig. 43 29
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4180 FIG00955126: hypothetical protein insig. 41 28
  Azospirillum sp. SherDot2 MPMX19_01660 Response regulator PleD insig. 39 31
  Azospirillum brasilense Sp245 AZOBR_RS10245 diguanylate cyclase sig. 38 31
  Acidovorax sp. GW101-3H11 Ac3H11_3356 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 43 28
  Pseudomonas sp. S08-1 OH686_03265 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor insig. 37 33
  Pseudomonas fluorescens FW300-N2C3 AO356_11550 diguanylate cyclase insig. 41 28
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1345 diguanylate cyclase (GGDEF) domain insig. 45 27
  Herbaspirillum seropedicae SmR1 HSERO_RS09550 diguanylate cyclase insig. 43 27
  Azospirillum sp. SherDot2 MPMX19_04554 Response regulator PleD sig. 41 29
  Pseudomonas sp. RS175 PFR28_04429 hypothetical protein insig. 40 27
  Pseudomonas simiae WCS417 PS417_12810 diguanylate cyclase insig. 40 30
  Rhizobium sp. OAE497 ABIE40_RS08030 sensor domain-containing diguanylate cyclase insig. 38 28
  Rhodospirillum rubrum S1H Rru_A3374 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain (NCBI) insig. 39 31
  Pseudomonas stutzeri RCH2 Psest_0664 diguanylate cyclase (GGDEF) domain insig. 40 29
  Cupriavidus basilensis FW507-4G11 RR42_RS25885 diguanylate cyclase insig. 36 41
  Azospirillum sp. SherDot2 MPMX19_01264 hypothetical protein insig. 39 31
  Desulfovibrio vulgaris Miyazaki F DvMF_2350 diguanylate cyclase with PAS/PAC and GAF sensors (RefSeq) insig. 43 29
  Magnetospirillum magneticum AMB-1 AMB_RS06820 GGDEF domain-containing protein cofit 41 32
  Paraburkholderia sabiae LMG 24235 QEN71_RS24835 sensor domain-containing diguanylate cyclase cofit 41 27
  Ralstonia solanacearum PSI07 RPSI07_RS09290 GGDEF domain-containing protein insig. 39 29
  Enterobacter sp. TBS_079 MPMX20_02482 putative diguanylate cyclase DgcT cofit 34 43
  Paraburkholderia graminis OAS925 ABIE53_004649 diguanylate cyclase (GGDEF)-like protein strong 44 27
  Shewanella amazonensis SB2B Sama_2623 cyclic nucleotide phosphodiesterase, putative (RefSeq) strong 32 48
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03607 PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein insig. 44 27
  Pseudomonas sp. S08-1 OH686_03075 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 40 28
  Pseudomonas sp. RS175 PFR28_04608 hypothetical protein insig. 39 28
  Kangiella aquimarina DSM 16071 B158DRAFT_0309 diguanylate cyclase (GGDEF) domain insig. 40 29
  Rhodopseudomonas palustris CGA009 TX73_020695 diguanylate cyclase insig. 40 29
  Desulfovibrio vulgaris Miyazaki F DvMF_2758 diguanylate cyclase with PAS/PAC sensor (RefSeq) insig. 42 28
  Ralstonia solanacearum PSI07 RPSI07_RS20950 GGDEF domain-containing protein insig. 41 33
  Rhodospirillum rubrum S1H Rru_A1272 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain (NCBI) insig. 39 29
  Azospirillum brasilense Sp245 AZOBR_RS16180 diguanylate cyclase strong 40 29
  Azospirillum sp. SherDot2 MPMX19_04290 hypothetical protein insig. 39 28
  Azospirillum brasilense Sp245 AZOBR_RS15555 transcriptional regulator insig. 39 30
  Azospirillum sp. SherDot2 MPMX19_00002 Response regulator PleD insig. 38 29
  Acidovorax sp. GW101-3H11 Ac3H11_1024 GGDEF/response regulator receiver domain protein insig. 42 29
  Marinobacter adhaerens HP15 HP15_4093 membrane protein containing diguanylate cyclase, predicted domains insig. 40 29
  Dechlorosoma suillum PS Dsui_3164 diguanylate cyclase (GGDEF) domain-containing protein cofit 40 33
  Shewanella loihica PV-4 Shew_3381 diguanylate cyclase (RefSeq) strong 38 27
  Shewanella amazonensis SB2B Sama_3210 GGDEF domain-containing protein (RefSeq) strong 40 27
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_139 Two-component response regulator insig. 35 33
  Paraburkholderia sabiae LMG 24235 QEN71_RS16450 diguanylate cyclase insig. 43 28
  Lysobacter sp. OAE881 ABIE51_RS07485 ligand-binding sensor domain-containing diguanylate cyclase insig. 40 29
  Pseudomonas fluorescens FW300-N2C3 AO356_01080 histidine kinase insig. 37 33
  Acidovorax sp. GW101-3H11 Ac3H11_3582 diguanylate cyclase (GGDEF domain) insig. 39 29
  Lysobacter sp. OAE881 ABIE51_RS14420 sensor domain-containing diguanylate cyclase insig. 37 35
  Acidovorax sp. GW101-3H11 Ac3H11_3069 Response regulator containing a CheY-like receiver domain and a GGDEF domain insig. 38 33
  Azospirillum sp. SherDot2 MPMX19_01436 hypothetical protein insig. 37 30
  Kangiella aquimarina DSM 16071 B158DRAFT_0477 diguanylate cyclase (GGDEF) domain insig. 27 72
  Desulfovibrio vulgaris Hildenborough JW710 DVU0940 pleD GGDEF domain protein (TIGR) sig. 38 32
  Escherichia coli ECRC100 OKFHMN_04535 dgcT putative diguanylate cyclase DgcT insig. 36 35
  Escherichia coli ECRC102 NIAGMN_23800 dgcT putative diguanylate cyclase DgcT no data 36 35
  Escherichia coli ECRC98 JDDGAC_08145 dgcT putative diguanylate cyclase DgcT cofit 36 35
  Escherichia coli ECRC99 KEDOAH_23210 dgcT putative diguanylate cyclase DgcT no data 36 35
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.786.1 FIG01210197: hypothetical protein insig. 41 29
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3472.1 sensor histidine kinase insig. 41 27
  Escherichia coli ECOR38 HEPCGN_23600 GGDEF domain-containing protein insig. 39 29
  Escherichia coli Nissle 1917 ECOLIN_RS05345 GGDEF domain-containing protein insig. 39 29
  Burkholderia phytofirmans PsJN BPHYT_RS34775 diguanylate cyclase insig. 43 28
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02648 diguanylate cyclase (GGDEF) domain-containing protein insig. 39 29
  Dechlorosoma suillum PS Dsui_3004 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 39 28
  Pseudomonas fluorescens GW456-L13 PfGW456L13_492 Sensory box/GGDEF family protein insig. 37 29
  Marinobacter adhaerens HP15 HP15_2378 sensory box/GGDEF family protein insig. 36 29
  Pseudomonas simiae WCS417 PS417_15980 histidine kinase insig. 35 34
  Ralstonia sp. UNC404CL21Col ABZR87_RS21625 GGDEF domain-containing protein insig. 42 27
  Serratia liquefaciens MT49 IAI46_05820 diguanylate cyclase insig. 40 33
  Marinobacter adhaerens HP15 HP15_850 GGDEF domain protein insig. 40 29
  Escherichia fergusonii Becca EFB2_03056 putative diguanylate cyclase DgcT insig. 39 29