Homologs of HSERO_RS13970 from Herbaspirillum seropedicae SmR1

diguanylate cyclase
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Herbaspirillum seropedicae SmR1 HSERO_RS13970 diguanylate cyclase insig. 100 100
o Pseudomonas fluorescens FW300-N2E3 AO353_29070 diguanylate cyclase insig. 44 94
o Variovorax sp. SCN45 GFF1755 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 45 92
o Dechlorosoma suillum PS Dsui_2804 diguanylate cyclase (GGDEF) domain-containing protein insig. 45 95
o Azospirillum brasilense Sp245 AZOBR_RS17635 hypothetical protein insig. 40 93
  Burkholderia phytofirmans PsJN BPHYT_RS29510 deoxyuridine 5`-triphosphate nucleotidohydrolase insig. 32 67
  Paraburkholderia graminis OAS925 ABIE53_005160 diguanylate cyclase (GGDEF)-like protein strong 41 43
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01520 diguanylate cyclase (GGDEF) domain-containing protein insig. 34 67
  Paraburkholderia sabiae LMG 24235 QEN71_RS09820 diguanylate cyclase insig. 34 67
  Pseudomonas sp. S08-1 OH686_16635 hypothetical protein insig. 31 66
  Dechlorosoma suillum PS Dsui_2425 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 48 30
  Magnetospirillum magneticum AMB-1 AMB_RS21020 bifunctional diguanylate cyclase/phosphodiesterase insig. 47 30
  Shewanella amazonensis SB2B Sama_3265 GGDEF domain-containing protein (RefSeq) insig. 43 34
  Magnetospirillum magneticum AMB-1 AMB_RS23225 GGDEF domain-containing protein insig. 42 35
  Shewanella oneidensis MR-1 SO4324 GGDEF domain protein (NCBI ptt file) insig. 47 30
  Shewanella loihica PV-4 Shew_0306 diguanylate cyclase/phosphodiesterase with GAF sensor (RefSeq) cofit 48 31
  Shewanella sp. ANA-3 Shewana3_0375 diguanylate cyclase/phosphodiesterase with GAF sensor (RefSeq) insig. 47 30
  Magnetospirillum magneticum AMB-1 AMB_RS18310 bifunctional diguanylate cyclase/phosphodiesterase cofit 42 35
  Shewanella sp. ANA-3 Shewana3_3543 diguanylate cyclase with PAS/PAC sensor (RefSeq) insig. 40 35
  Dechlorosoma suillum PS Dsui_3437 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 47 30
  Marinobacter adhaerens HP15 HP15_3980 diguanylate cyclase/phosphodiesterase insig. 43 37
  Marinobacter adhaerens HP15 HP15_68 sensory box/FOG: EAL domain/GGDEF domain containing protein insig. 42 36
  Pseudomonas putida KT2440 PP_4670 diguanylate cyclase sig. 41 39
  Herbaspirillum seropedicae SmR1 HSERO_RS16570 membrane protein insig. 47 29
  Magnetospirillum magneticum AMB-1 AMB_RS11515 DUF3365 domain-containing protein insig. 46 29
  Azospirillum brasilense Sp245 AZOBR_RS30045 uncharacterized signaling protein CC_0091 insig. 47 30
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS18400 sensor domain-containing diguanylate cyclase cofit 44 31
  Magnetospirillum magneticum AMB-1 AMB_RS23380 PAS domain S-box protein insig. 28 59
  Magnetospirillum magneticum AMB-1 AMB_RS07755 PAS domain S-box protein insig. 40 38
  Ralstonia solanacearum PSI07 RPSI07_RS01485 GGDEF domain-containing protein insig. 45 31
  Marinobacter adhaerens HP15 HP15_1500 sensory box/GGDEF family protein insig. 44 30
  Desulfovibrio vulgaris Miyazaki F DvMF_1530 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 44 31
  Synechococcus elongatus PCC 7942 Synpcc7942_1355 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 42 30
  Magnetospirillum magneticum AMB-1 AMB_RS13305 PAS domain S-box protein cofit 31 58
  Ralstonia solanacearum GMI1000 RS_RS18985 GGDEF domain-containing protein insig. 45 31
  Azospirillum sp. SherDot2 MPMX19_00480 hypothetical protein insig. 42 33
  Dechlorosoma suillum PS Dsui_0262 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 45 34
  Shewanella oneidensis MR-1 SO0341 sensory box protein (NCBI ptt file) insig. 39 34
  Herbaspirillum seropedicae SmR1 HSERO_RS13620 diguanylate cyclase strong 46 29
  Dechlorosoma suillum PS Dsui_3449 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 39 37
  Castellaniella sp019104865 MT123 ABCV34_RS00960 EAL domain-containing protein insig. 43 33
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04630 PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein insig. 45 30
  Pseudomonas stutzeri RCH2 Psest_2562 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 44 31
  Magnetospirillum magneticum AMB-1 AMB_RS15005 two-component system response regulator insig. 43 33
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 41 34
  Shewanella sp. ANA-3 Shewana3_3829 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 39 34
  Magnetospirillum magneticum AMB-1 AMB_RS23535 PAS domain S-box protein cofit 38 37
  Pseudomonas sp. S08-1 OH686_14965 Sensory box/GGDEF family protein cofit 44 33
  Pseudomonas fluorescens SBW25 PFLU_RS13445 bifunctional diguanylate cyclase/phosphodiesterase insig. 47 29
  Pseudomonas fluorescens SBW25-INTG PFLU_RS13445 bifunctional diguanylate cyclase/phosphodiesterase insig. 47 29
  Pseudomonas putida KT2440 PP_3711 diguanylate cyclase insig. 46 30
  Marinobacter adhaerens HP15 HP15_3422 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) insig. 39 33
  Herbaspirillum seropedicae SmR1 HSERO_RS04295 diguanylate cyclase strong 45 31
  Burkholderia phytofirmans PsJN BPHYT_RS03250 diguanylate cyclase insig. 42 34
  Ralstonia sp. UNC404CL21Col ABZR87_RS22185 EAL domain-containing protein insig. 44 31
  Pseudomonas sp. S08-1 OH686_03710 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) cofit 44 31
  Alteromonas macleodii MIT1002 MIT1002_00072 Bacteriophytochrome cph2 strong 40 37
  Dechlorosoma suillum PS Dsui_3108 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 41 33
  Rhodospirillum rubrum S1H Rru_A1035 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) insig. 46 28
  Pseudomonas simiae WCS417 PS417_12760 histidine kinase insig. 46 30
  Dechlorosoma suillum PS Dsui_2032 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 44 31
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS12250 diguanylate cyclase insig. 43 35
  Ralstonia solanacearum UW163 UW163_RS01355 diguanylate cyclase insig. 43 35
  Ralstonia sp. UNC404CL21Col ABZR87_RS08150 EAL domain-containing protein insig. 42 35
  Kangiella aquimarina DSM 16071 B158DRAFT_2502 periplasmic sensor diguanylate cyclase/phosphodiesterase insig. 41 31
  Pseudomonas sp. S08-1 OH686_08910 Phytochrome-like protein / Cph2 cofit 38 36
  Pseudomonas sp. S08-1 OH686_00995 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 42 35
  Dechlorosoma suillum PS Dsui_2365 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 41 31
  Desulfovibrio vulgaris Hildenborough JW710 DVU0422 sensory box/GGDEF domain/EAL domain protein (TIGR) insig. 43 34
  Rhodanobacter sp. FW510-T8 OKGIIK_01410 Histidine kinase cofit 42 34
  Marinobacter adhaerens HP15 HP15_806 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 44 30
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS21640 GGDEF domain-containing protein insig. 44 31
  Ralstonia solanacearum UW163 UW163_RS17545 GGDEF domain-containing protein insig. 44 31
  Acidovorax sp. GW101-3H11 Ac3H11_4997 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 44 32
  Magnetospirillum magneticum AMB-1 AMB_RS06165 CBS domain-containing protein insig. 39 37
  Dechlorosoma suillum PS Dsui_2148 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 46 34
  Ralstonia solanacearum GMI1000 RS_RS02945 PAS domain S-box protein insig. 47 29
  Pseudomonas fluorescens FW300-N2C3 AO356_14260 diguanylate cyclase insig. 41 37
  Dechlorosoma suillum PS Dsui_0894 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 44 30
  Dechlorosoma suillum PS Dsui_3161 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein sig. 43 32
  Pseudomonas fluorescens SBW25 PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 42 37
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 42 37
  Pseudomonas syringae pv. syringae B728a Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 41 37
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 41 37
  Paraburkholderia sabiae LMG 24235 QEN71_RS02090 EAL domain-containing protein insig. 42 36
  Pseudomonas simiae WCS417 PS417_25885 diguanylate cyclase insig. 41 37
  Pseudomonas sp. RS175 PFR28_04079 Membrane-bound lytic murein transglycosylase F insig. 40 37
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4790 sensory box/GGDEF domain/EAL domain protein sig. 39 37
  Dechlorosoma suillum PS Dsui_1501 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 39 36
  Azospirillum sp. SherDot2 MPMX19_02843 hypothetical protein insig. 46 31
  Pseudomonas syringae pv. syringae B728a Psyr_2486 diguanylate cyclase/phosphodiesterase insig. 46 29
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2486 diguanylate cyclase/phosphodiesterase insig. 46 29
  Dechlorosoma suillum PS Dsui_2160 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 42 36
  Rhodanobacter denitrificans MT42 LRK55_RS05170 diguanylate cyclase cofit 41 34
  Rhodospirillum rubrum S1H Rru_A1544 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) insig. 41 34
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS05395 diguanylate cyclase insig. 41 34
  Rahnella sp. WP5 EX31_RS09160 EAL domain-containing protein insig. 41 30
  Azospirillum brasilense Sp245 AZOBR_RS04390 signal peptide protein cofit 41 34
  Sinorhizobium meliloti 1021 SMa1548 Diguanylate cyclase/phosphodiesterase insig. 46 30
  Dechlorosoma suillum PS Dsui_1824 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 43 30