Homologs of HSERO_RS01295 from Herbaspirillum seropedicae SmR1

deoxyuridine 5'-triphosphate nucleotidohydrolase
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Herbaspirillum seropedicae SmR1 HSERO_RS01295 deoxyuridine 5'-triphosphate nucleotidohydrolase strong 100 100
  Variovorax sp. SCN45 GFF1811 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 44 64
o Rhodopseudomonas palustris CGA009 TX73_016650 EAL domain-containing protein insig. 33 98
  Marinobacter adhaerens HP15 HP15_806 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 37 67
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS12250 diguanylate cyclase insig. 40 64
  Ralstonia solanacearum UW163 UW163_RS01355 diguanylate cyclase insig. 40 64
  Ralstonia sp. UNC404CL21Col ABZR87_RS07670 bifunctional diguanylate cyclase/phosphodiesterase insig. 39 63
  Ralstonia solanacearum PSI07 RPSI07_RS21070 PAS domain S-box protein insig. 40 64
  Paraburkholderia sabiae LMG 24235 QEN71_RS30355 bifunctional diguanylate cyclase/phosphodiesterase insig. 38 66
  Burkholderia phytofirmans PsJN BPHYT_RS13030 diguanylate cyclase insig. 40 64
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 37 68
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2238 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 39 63
  Pseudomonas sp. S08-1 OH686_08910 Phytochrome-like protein / Cph2 cofit 35 68
  Pseudomonas sp. RS175 PFR28_01206 hypothetical protein insig. 39 62
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_39 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 38 63
  Pantoea sp. MT58 IAI47_03280 EAL domain-containing protein insig. 37 66
  Ralstonia sp. UNC404CL21Col ABZR87_RS08150 EAL domain-containing protein insig. 39 64
  Ralstonia sp. UNC404CL21Col ABZR87_RS19215 EAL domain-containing protein cofit 38 66
  Desulfovibrio vulgaris Miyazaki F DvMF_2963 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 38 64
  Synechococcus elongatus PCC 7942 Synpcc7942_1355 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 36 68
  Pseudomonas sp. S08-1 OH686_00995 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 35 68
  Ralstonia solanacearum GMI1000 RS_RS02945 PAS domain S-box protein insig. 40 64
  Cupriavidus basilensis FW507-4G11 RR42_RS22465 membrane protein insig. 37 68
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS18290 bifunctional diguanylate cyclase/phosphodiesterase insig. 38 64
  Ralstonia solanacearum UW163 UW163_RS20840 bifunctional diguanylate cyclase/phosphodiesterase insig. 38 64
  Magnetospirillum magneticum AMB-1 AMB_RS18310 bifunctional diguanylate cyclase/phosphodiesterase cofit 34 71
  Ralstonia solanacearum PSI07 RPSI07_RS21500 bifunctional diguanylate cyclase/phosphodiesterase insig. 38 66
  Pseudomonas sp. S08-1 OH686_03710 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) cofit 39 63
  Dechlorosoma suillum PS Dsui_0506 diguanylate cyclase (GGDEF) domain-containing protein cofit 38 65
  Ralstonia solanacearum GMI1000 RS_RS22695 bifunctional diguanylate cyclase/phosphodiesterase insig. 38 64
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00437 PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein insig. 39 64
  Ralstonia solanacearum GMI1000 RS_RS02540 bifunctional diguanylate cyclase/phosphodiesterase insig. 39 69
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS11715 bifunctional diguanylate cyclase/phosphodiesterase insig. 39 68
  Ralstonia solanacearum UW163 UW163_RS01870 bifunctional diguanylate cyclase/phosphodiesterase insig. 39 68
  Shewanella loihica PV-4 Shew_3428 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 37 68
  Magnetospirillum magneticum AMB-1 AMB_RS06515 PAS domain S-box protein insig. 37 64
  Ralstonia solanacearum PSI07 RPSI07_RS05310 PAS domain S-box protein cofit 39 64
  Paraburkholderia graminis OAS925 ABIE53_002821 diguanylate cyclase (GGDEF)-like protein/PAS domain S-box-containing protein sig. 38 63
  Shewanella amazonensis SB2B Sama_0378 sensory box protein (RefSeq) sig. 39 63
  Cupriavidus basilensis FW507-4G11 RR42_RS00130 diguanylate cyclase insig. 38 65
  Enterobacter asburiae PDN3 EX28DRAFT_1441 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 35 66
  Dechlorosoma suillum PS Dsui_3161 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein sig. 37 64
  Rhodopseudomonas palustris CGA009 TX73_004010 EAL domain-containing protein insig. 37 65
  Marinobacter adhaerens HP15 HP15_1500 sensory box/GGDEF family protein insig. 36 64
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3263 Sensory box/GGDEF family protein insig. 38 66
  Marinobacter adhaerens HP15 HP15_68 sensory box/FOG: EAL domain/GGDEF domain containing protein insig. 36 68
  Vibrio cholerae E7946 ATCC 55056 CSW01_03440 bifunctional diguanylate cyclase/phosphodiesterase insig. 35 64
  Caulobacter crescentus NA1000 CCNA_03191 PAS-family GGDEF/EAL family protein cofit 38 64
  Caulobacter crescentus NA1000 Δfur CCNA_03191 PAS-family GGDEF/EAL family protein cofit 38 64
  Variovorax sp. SCN45 GFF3184 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 37 66
  Rahnella sp. WP5 EX31_RS09160 EAL domain-containing protein insig. 38 63
  Enterobacter sp. TBS_079 MPMX20_01206 hypothetical protein strong 36 66
  Shewanella sp. ANA-3 Shewana3_0544 response regulator receiver modulated diguanylate cyclase/phosphodiesterase (RefSeq) insig. 36 66
  Pseudomonas fluorescens SBW25 PFLU_RS00935 EAL domain-containing protein cofit 38 63
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00935 EAL domain-containing protein strong 38 63
  Dechlorosoma suillum PS Dsui_1531 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 38 64
  Shewanella oneidensis MR-1 SO0341 sensory box protein (NCBI ptt file) insig. 36 63
  Pseudomonas syringae pv. syringae B728a Psyr_2486 diguanylate cyclase/phosphodiesterase insig. 37 63
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2486 diguanylate cyclase/phosphodiesterase insig. 37 63
  Rhodospirillum rubrum S1H Rru_A0558 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) (NCBI) insig. 39 62
  Herbaspirillum seropedicae SmR1 HSERO_RS16570 membrane protein insig. 39 64
  Azospirillum brasilense Sp245 AZOBR_RS30045 uncharacterized signaling protein CC_0091 insig. 37 65
  Alteromonas macleodii MIT1002 MIT1002_02202 Cyclic di-GMP phosphodiesterase Gmr insig. 35 63
  Pseudomonas sp. S08-1 OH686_07220 c-di-GMP phosphodiesterase cofit 33 75
  Dechlorosoma suillum PS Dsui_0894 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 36 64
  Pantoea sp. MT58 IAI47_03300 EAL domain-containing protein insig. 38 63
  Enterobacter sp. TBS_079 MPMX20_02056 hypothetical protein insig. 36 64
  Pseudomonas fluorescens GW456-L13 PfGW456L13_490 GGDEF domain protein insig. 38 63
  Pseudomonas sp. RS175 PFR28_03785 hypothetical protein insig. 36 64
  Pseudomonas simiae WCS417 PS417_24275 diguanylate phosphodiesterase strong 36 64
  Pseudomonas fluorescens SBW25 PFLU_RS13445 bifunctional diguanylate cyclase/phosphodiesterase insig. 36 64
  Pseudomonas fluorescens SBW25-INTG PFLU_RS13445 bifunctional diguanylate cyclase/phosphodiesterase insig. 36 64
  Shewanella sp. ANA-3 Shewana3_3829 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 35 63
  Paraburkholderia sabiae LMG 24235 QEN71_RS08805 EAL domain-containing protein insig. 37 64
  Pseudomonas simiae WCS417 PS417_12760 histidine kinase insig. 37 63
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2779 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 35 64
  Acidovorax sp. GW101-3H11 Ac3H11_5002 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 37 63
  Pseudomonas fluorescens FW300-N2E3 AO353_14025 diguanylate phosphodiesterase strong 36 64
  Synechococcus elongatus PCC 7942 Synpcc7942_1859 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 35 64
  Enterobacter sp. TBS_079 MPMX20_04172 putative signaling protein insig. 36 67
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1452 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 36 64
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_467 Sensory box/GGDEF family protein insig. 38 66
  Dechlorosoma suillum PS Dsui_2394 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 37 64
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5083 Serine hydroxymethyltransferase (EC 2.1.2.1) sig. 36 64
  Pseudomonas fluorescens FW300-N2C3 AO356_26670 histidine kinase insig. 35 64
  Rahnella sp. WP5 EX31_RS12105 bifunctional diguanylate cyclase/phosphodiesterase insig. 35 66
  Pseudomonas sp. RS175 PFR28_02457 putative signaling protein insig. 38 66
  Shewanella sp. ANA-3 Shewana3_0429 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 37 63
  Enterobacter asburiae PDN3 EX28DRAFT_3316 diguanylate cyclase (GGDEF) domain insig. 36 66
  Pseudomonas syringae pv. syringae B728a Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 36 64
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 36 64
  Pseudomonas fluorescens FW300-N2C3 AO356_15730 diguanylate phosphodiesterase insig. 36 64
  Pseudomonas fluorescens SBW25 PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase cofit 35 64
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase sig. 35 64
  Pseudomonas fluorescens FW300-N2E3 AO353_11530 diguanylate cyclase strong 38 63
  Shewanella oneidensis MR-1 SO0427 sensory box protein (NCBI ptt file) sig. 38 64
  Pseudomonas fluorescens FW300-N2E3 AO353_22910 histidine kinase insig. 37 66
  Pseudomonas putida KT2440 PP_3319 Sensory box protein/GGDEF domain protein insig. 35 63
  Kangiella aquimarina DSM 16071 B158DRAFT_2502 periplasmic sensor diguanylate cyclase/phosphodiesterase insig. 35 63
  Dechlorosoma suillum PS Dsui_1564 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 38 64