Homologs of HMPREF1058_RS03355 from Phocaeicola vulgatus CL09T03C04

efflux RND transporter periplasmic adaptor subunit
SEED: ABC transporter permease
KEGG: HlyD family secretion protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03355 efflux RND transporter periplasmic adaptor subunit insig. 100 100
o Phocaeicola dorei CL03T12C01 ABI39_RS17670 efflux RND transporter periplasmic adaptor subunit insig. 96 100
o Bacteroides ovatus ATCC 8483 BACOVA_04196 efflux transporter, RND family, MFP subunit insig. 80 100
o Bacteroides thetaiotaomicron VPI-5482 BT1467 ABC transporter permease (NCBI ptt file) insig. 79 100
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS05975 HlyD family efflux transporter periplasmic adaptor subunit cofit 71 100
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS08590 HlyD family efflux transporter periplasmic adaptor subunit strong 50 100
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02270 efflux transporter periplasmic adaptor subunit insig. 42 100
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS13075 efflux RND transporter periplasmic adaptor subunit cofit 38 100
o Sphingobium sp. HT1-2 GFF3843 ABC transporter, permease protein cofit 34 100
  Phocaeicola dorei CL03T12C01 ABI39_RS16575 HlyD family efflux transporter periplasmic adaptor subunit insig. 37 100
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS01160 HlyD family efflux transporter periplasmic adaptor subunit strong 37 100
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS12150 efflux RND transporter periplasmic adaptor subunit insig. 35 100
  Bacteroides ovatus ATCC 8483 BACOVA_02583 efflux transporter, RND family, MFP subunit insig. 37 100
  Bacteroides thetaiotaomicron VPI-5482 BT0858 conserved hypothetical protein (NCBI ptt file) sig. 36 100
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS04170 transporter insig. 33 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4555.1 ABC transporter permease insig. 24 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS04450 efflux RND transporter periplasmic adaptor subunit strong 24 87
o Rhodanobacter denitrificans MT42 LRK55_RS04225 efflux RND transporter periplasmic adaptor subunit strong 24 87
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS05500 efflux RND transporter periplasmic adaptor subunit cofit 24 87
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS10620 efflux RND transporter periplasmic adaptor subunit insig. 23 91
o Rhodanobacter sp. FW510-T8 OKGIIK_11335 efflux transporter periplasmic adaptor subunit sig. 24 87
o Pseudomonas orientalis W4I3 QF045_RS21495 efflux RND transporter periplasmic adaptor subunit insig. 25 93
o Shewanella amazonensis SB2B Sama_2865 HlyD family secretion protein (RefSeq) insig. 25 90
o Shewanella sp. ANA-3 Shewana3_3262 RND family efflux transporter MFP subunit (RefSeq) cofit 22 95
o Rahnella sp. WP5 EX31_RS02535 HlyD family efflux transporter periplasmic adaptor subunit insig. 25 92
o Shewanella oneidensis MR-1 SO3694 conserved hypothetical protein (NCBI ptt file) insig. 23 99
  Lysobacter sp. OAE881 ABIE51_RS18325 HlyD family efflux transporter periplasmic adaptor subunit insig. 22 97
o Shewanella loihica PV-4 Shew_0721 RND family efflux transporter MFP subunit (RefSeq) insig. 23 95
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS03990 HlyD family efflux transporter periplasmic adaptor subunit insig. 22 86
  Enterobacter asburiae PDN3 EX28DRAFT_1354 Multidrug resistance efflux pump insig. 24 72
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4664 RND transporter, membrane fusion protein no data 22 86
  Pseudomonas sp. DMC3 GFF3508 Multidrug resistance protein MdtA cofit 23 86
  Rhodanobacter denitrificans MT42 LRK55_RS11815 HlyD family efflux transporter periplasmic adaptor subunit insig. 21 87
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS12080 HlyD family efflux transporter periplasmic adaptor subunit insig. 21 87
  Desulfovibrio vulgaris Hildenborough JW710 DVU2439 efflux transporter, RND family, MFP subunit (TIGR) cofit 23 93
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3267 RND transporter, membrane fusion protein sig. 22 88
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS14405 HlyD family efflux transporter periplasmic adaptor subunit insig. 21 98
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08730 efflux transporter periplasmic adaptor subunit insig. 28 46
  Serratia liquefaciens MT49 IAI46_18480 efflux RND transporter periplasmic adaptor subunit insig. 26 47
  Klebsiella pneumoniae MKP103 KDGMDA_26300 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit insig. 20 96
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0542 RND family efflux transporter, MFP subunit cofit 26 46
  Bacteroides stercoris CC31F HMPREF1181_RS15585 HlyD family efflux transporter periplasmic adaptor subunit strong 21 93
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0680 RND family efflux transporter, MFP subunit sig. 25 85
  Klebsiella pneumoniae MKP103 KDGMDA_20790 HlyD family secretion protein insig. 25 56
  Dinoroseobacter shibae DFL-12 Dshi_0916 efflux transporter, RND family, MFP subunit (RefSeq) strong 24 85
  Xanthobacter sp. DMC5 GFF2164 Macrolide export protein MacA insig. 22 84
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_13035 MexH family multidrug efflux RND transporter periplasmic adaptor subunit insig. 22 92
  Klebsiella michiganensis M5al BWI76_RS13180 multidrug transporter EmrA insig. 24 65
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1273 Probable RND efflux membrane fusion protein strong 22 86
  Pseudomonas stutzeri RCH2 Psest_2138 RND family efflux transporter, MFP subunit strong 22 88
  Pseudomonas fluorescens FW300-N2E3 AO353_22890 secretion protein HlyD insig. 22 84
  Pseudomonas aeruginosa PA14 IKLFDK_15975 transporter insig. 25 59
  Enterobacter sp. TBS_079 MPMX20_02192 Colistin resistance protein EmrA insig. 23 73
  Herbaspirillum seropedicae SmR1 HSERO_RS07645 RND transporter MFP subunit insig. 23 88
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS12055 efflux RND transporter periplasmic adaptor subunit cofit 22 95
  Pseudomonas aeruginosa MRSN321 DY961_RS01225 HlyD family secretion protein insig. 25 59
  Pseudomonas aeruginosa PUPa3 DQ20_RS34330 HlyD family secretion protein insig. 25 59
  Phocaeicola dorei CL03T12C01 ABI39_RS11735 HlyD family efflux transporter periplasmic adaptor subunit strong 22 95
  Pseudomonas fluorescens FW300-N2C3 AO356_25870 secretion protein HlyD strong 21 86
  Pseudomonas sp. SVBP6 COO64_RS14560 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit insig. 22 87
  Azospirillum sp. SherDot2 MPMX19_05611 Multidrug resistance protein MdtA insig. 21 86
  Pseudomonas sp. RS175 PFR28_02195 Multidrug resistance protein MdtA insig. 21 86
  Desulfovibrio vulgaris Miyazaki F DvMF_2956 efflux transporter, RND family, MFP subunit (RefSeq) strong 25 59
  Rahnella sp. WP5 EX31_RS17705 efflux RND transporter periplasmic adaptor subunit insig. 24 71
  Alteromonas macleodii MIT1002 MIT1002_00866 Toluene efflux pump periplasmic linker protein TtgA precursor insig. 23 47
  Alteromonas macleodii MIT1002 MIT1002_00481 Macrolide-specific efflux protein MacA precursor insig. 22 91
  Pseudomonas fluorescens FW300-N2E3 AO353_20555 transporter insig. 24 51
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS15755 HlyD family efflux transporter periplasmic adaptor subunit strong 22 95
  Variovorax sp. OAS795 ABID97_RS17355 efflux RND transporter periplasmic adaptor subunit insig. 21 86
  Fusobacterium nucleatum SB010 HUW76_07490 efflux RND transporter periplasmic adaptor subunit cofit 26 60
  Herbaspirillum seropedicae SmR1 HSERO_RS10245 hemolysin secretion protein D insig. 21 86
  Bacteroides ovatus ATCC 8483 BACOVA_04274 efflux transporter, RND family, MFP subunit strong 24 50
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3062 RND efflux membrane fusion protein insig. 22 80
  Pseudomonas syringae pv. syringae B728a Psyr_2482 Secretion protein HlyD sig. 21 91
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2482 Secretion protein HlyD insig. 21 91
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03180 efflux transporter periplasmic adaptor subunit strong 22 59
  Variovorax sp. SCN45 GFF430 RND efflux system, membrane fusion protein insig. 20 90
  Pseudomonas segetis P6 MPMX49_03088 Colistin resistance protein EmrA insig. 22 51
  Pantoea sp. MT58 IAI47_21720 efflux RND transporter periplasmic adaptor subunit insig. 22 80
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS10960 efflux RND transporter periplasmic adaptor subunit insig. 23 90
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4963.1 Acriflavin resistance protein insig. 21 84
  Dickeya dianthicola ME23 DZA65_RS08240 efflux RND transporter periplasmic adaptor subunit insig. 20 78
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02790 Macrolide export protein MacA insig. 24 67
  Escherichia coli ECOR27 NOLOHH_22205 macA macrolide transporter subunit MacA insig. 24 67
  Escherichia coli ECOR38 HEPCGN_22875 macA macrolide transporter subunit MacA insig. 24 67
  Escherichia coli ECRC62 BNILDI_20460 macA macrolide transporter subunit MacA insig. 24 67
  Xanthobacter sp. DMC5 GFF2737 Multidrug resistance protein MdtE insig. 24 57
  Variovorax sp. SCN45 GFF1292 Macrolide-specific efflux protein MacA insig. 22 86
  Paraburkholderia sabiae LMG 24235 QEN71_RS23300 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit insig. 22 88
  Pseudomonas sp. DMC3 GFF2033 Multidrug resistance protein MdtA cofit 21 80
  Escherichia fergusonii Becca EFB2_03183 Macrolide export protein MacA insig. 24 67
  Escherichia coli Nissle 1917 ECOLIN_RS04675 macrolide transporter subunit MacA no data 24 67
  Azospirillum brasilense Sp245 AZOBR_RS31315 RND transporter strong 23 50
  Pseudomonas fluorescens FW300-N2E3 AO353_16360 RND transporter cofit 22 80
  Rhizobium sp. OAE497 ABIE40_RS17050 efflux RND transporter periplasmic adaptor subunit strong 21 81
  Rhodopseudomonas palustris CGA009 TX73_021210 efflux RND transporter periplasmic adaptor subunit insig. 22 82
  Agrobacterium fabrum C58 Atu4637 nolF secretion protein insig. 24 63
  Erwinia amylovora T8 OLJFJH_15750 HlyD family secretion protein insig. 24 73
  Shewanella oneidensis MR-1 SO4015 conserved hypothetical protein (NCBI ptt file) no data 23 60
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4731 RND efflux membrane fusion protein insig. 22 80