Homologs of GFF85 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

'2'-5' RNA ligase' transl_table=11
SEED: 2'-5' RNA ligase
KEGG: 2'-5' RNA ligase

76 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF85 '2'-5' RNA ligase' transl_table=11 insig. 100 100
o Enterobacter asburiae PDN3 EX28DRAFT_3736 2'-5' RNA ligase insig. 80 100
  Escherichia coli Nissle 1917 ECOLIN_RS00825 RNA 2',3'-cyclic phosphodiesterase no data 77 100
o Escherichia coli Nissle 1917 ECOLIN_RS25975 RNA 2',3'-cyclic phosphodiesterase no data 77 100
o Escherichia fergusonii Becca EFB2_03897 RNA 2',3'-cyclic phosphodiesterase insig. 77 100
o Escherichia coli ECOR27 NOLOHH_02680 thpR RNA 2',3'-cyclic phosphodiesterase insig. 77 100
o Escherichia coli ECRC62 BNILDI_08990 thpR RNA 2',3'-cyclic phosphodiesterase insig. 77 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03515 'RNA 2',3'-cyclic phosphodiesterase' transl_table=11 insig. 77 100
o Escherichia coli BW25113 b0147 yadP orf, hypothetical protein (VIMSS) strong 77 100
o Escherichia coli BL21 ECD_00146 2'-5' RNA ligase insig. 77 100
o Enterobacter sp. TBS_079 MPMX20_00833 RNA 2',3'-cyclic phosphodiesterase insig. 77 100
o Escherichia coli ECRC100 OKFHMN_10335 thpR RNA 2',3'-cyclic phosphodiesterase insig. 76 100
o Escherichia coli ECRC101 MCAODC_00850 thpR RNA 2',3'-cyclic phosphodiesterase insig. 76 100
o Escherichia coli ECRC102 NIAGMN_08185 thpR RNA 2',3'-cyclic phosphodiesterase cofit 76 100
o Escherichia coli ECRC98 JDDGAC_13930 thpR RNA 2',3'-cyclic phosphodiesterase sig. 76 100
o Escherichia coli ECRC99 KEDOAH_17820 thpR RNA 2',3'-cyclic phosphodiesterase no data 76 100
o Escherichia coli ECOR38 HEPCGN_08285 thpR RNA 2',3'-cyclic phosphodiesterase insig. 76 100
o Klebsiella michiganensis M5al BWI76_RS05025 2'-5' RNA ligase sig. 77 98
o Klebsiella pneumoniae MKP103 KDGMDA_13280 RNA 2' 3'-cyclic phosphodiesterase insig. 76 98
o Serratia liquefaciens MT49 IAI46_21200 RNA 2',3'-cyclic phosphodiesterase insig. 64 99
o Erwinia tracheiphila SCR3 LU632_RS20070 thpR RNA 2',3'-cyclic phosphodiesterase insig. 63 99
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_15070 thpR RNA 2' 3'-cyclic phosphodiesterase cofit 63 99
o Pectobacterium carotovorum WPP14 HER17_RS05590 RNA 2',3'-cyclic phosphodiesterase cofit 61 99
o Dickeya dadantii 3937 DDA3937_RS15925 RNA 2',3'-cyclic phosphodiesterase insig. 63 99
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS13380 RNA 2',3'-cyclic phosphodiesterase insig. 62 97
o Erwinia amylovora T8 OLJFJH_00755 RNA 2' 3'-cyclic phosphodiesterase insig. 61 99
o Pantoea sp. MT58 IAI47_15625 RNA 2',3'-cyclic phosphodiesterase insig. 62 97
o Dickeya dianthicola 67-19 HGI48_RS16040 RNA 2',3'-cyclic phosphodiesterase insig. 62 99
o Dickeya dianthicola ME23 DZA65_RS17125 RNA 2',3'-cyclic phosphodiesterase insig. 62 99
o Rahnella sp. WP5 EX31_RS03240 RNA 2',3'-cyclic phosphodiesterase insig. 53 100
o Pseudomonas sp. S08-1 OH686_01815 2'-5' RNA ligase insig. 39 97
o Pseudomonas aeruginosa MRSN321 DY961_RS02685 thpR;go_function=2'-5'-RNA RNA 2' 3'-cyclic phosphodiesterase insig. 41 96
o Pseudomonas stutzeri RCH2 Psest_3556 2'-5' RNA ligase insig. 38 99
o Pseudomonas aeruginosa PA14 IKLFDK_14535 RNA 2' 3'-cyclic phosphodiesterase no data 41 96
o Pseudomonas sp. DMC3 GFF1623 RNA 2',3'-cyclic phosphodiesterase insig. 37 97
o Pseudomonas aeruginosa PUPa3 DQ20_RS32910 thpR;go_function=2'-5'-RNA RNA 2' 3'-cyclic phosphodiesterase sig. 40 96
o Pseudomonas fluorescens FW300-N2E3 AO353_29050 2'-5' RNA ligase insig. 37 97
o Kangiella aquimarina DSM 16071 B158DRAFT_0039 2'-5' RNA ligase insig. 32 95
o Shewanella loihica PV-4 Shew_3126 2'-5' RNA ligase (RefSeq) insig. 34 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4348 2'-5' RNA ligase no data 35 97
o Pseudomonas sp. SVBP6 COO64_RS08390 thpR RNA 2',3'-cyclic phosphodiesterase insig. 35 97
o Shewanella amazonensis SB2B Sama_2974 putative 2'-5' RNA ligase (RefSeq) insig. 36 99
o Pseudomonas segetis P6 ACVTMO_RS20685 thpR RNA 2',3'-cyclic phosphodiesterase insig. 35 98
o Dechlorosoma suillum PS Dsui_2392 2''-5'' RNA ligase insig. 38 79
o Azospirillum brasilense Sp245 AZOBR_RS02280 2'-5' RNA ligase no data 31 97
o Lysobacter sp. OAE881 ABIE51_RS12220 RNA 2',3'-cyclic phosphodiesterase insig. 36 98
o Pseudomonas putida KT2440 PP_2424 putative 2'-5' RNA ligase insig. 33 98
o Pseudomonas sp. BP01 JOY50_RS10420 thpR RNA 2',3'-cyclic phosphodiesterase no data 33 98
  Alteromonas macleodii MIT1002 MIT1002_00405 2'-5'-RNA ligase insig. 28 78
  Castellaniella sp019104865 MT123 ABCV34_RS12550 RNA 2',3'-cyclic phosphodiesterase cofit 35 74
o Marinobacter adhaerens HP15 HP15_881 2',5' RNA ligase insig. 31 96
o Shewanella oneidensis MR-1 SO0627 putative 2'-5' RNA ligase (NCBI ptt file) insig. 30 80
o Azospirillum sp. SherDot2 MPMX19_02595 RNA 2',3'-cyclic phosphodiesterase insig. 28 96
o Magnetospirillum magneticum AMB-1 AMB_RS21900 RNA 2',3'-cyclic phosphodiesterase no data 28 97
o Burkholderia phytofirmans PsJN BPHYT_RS11595 phosphoesterase no data 32 95
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS12890 RNA 2',3'-cyclic phosphodiesterase cofit 29 96
  Shewanella sp. ANA-3 Shewana3_0619 2'-5' RNA ligase (RefSeq) cofit 33 61
o Sphingobium sp. HT1-2 GFF1762 '2'-5' RNA ligase' transl_table=11 cofit 30 95
  Rhizobium sp. OAE497 ABIE40_RS18230 RNA 2',3'-cyclic phosphodiesterase insig. 29 74
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2766 2'-5' RNA ligase insig. 27 96
  Sinorhizobium meliloti 1021 SMc03835 2'-5' RNA ligase sig. 29 74
o Cupriavidus basilensis FW507-4G11 RR42_RS21505 hypothetical protein insig. 29 96
o Agrobacterium fabrum C58 Atu2678 2'-5' RNA ligase sig. 26 97
  Bosea sp. OAE506 ABIE41_RS04825 RNA 2',3'-cyclic phosphodiesterase insig. 29 97
  Ralstonia solanacearum GMI1000 RS_RS07265 RNA 2',3'-cyclic phosphodiesterase insig. 31 97
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_12700 RNA 2',3'-cyclic phosphodiesterase insig. 30 99
  Rhodospirillum rubrum S1H Rru_A3649 2',5' RNA ligase (NCBI) insig. 29 86
  Xanthobacter sp. DMC5 GFF1772 RNA 2',3'-cyclic phosphodiesterase insig. 28 73
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3617.1 FIG01209673: hypothetical protein insig. 31 97
  Paraburkholderia graminis OAS925 ABIE53_002399 2'-5' RNA ligase insig. 31 95
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS15695 hypothetical protein insig. 32 95
  Caulobacter crescentus NA1000 CCNA_03776 2'-5' RNA ligase strong 30 86
  Caulobacter crescentus NA1000 Δfur CCNA_03776 2'-5' RNA ligase cofit 30 86
  Ralstonia solanacearum PSI07 RPSI07_RS16920 RNA 2',3'-cyclic phosphodiesterase insig. 30 97
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS00580 RNA 2',3'-cyclic phosphodiesterase insig. 29 97
  Ralstonia solanacearum UW163 UW163_RS13910 RNA 2',3'-cyclic phosphodiesterase insig. 29 97