| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Variovorax sp. SCN45 | GFF750 | | Transcriptional regulator LigR, LysR family | insig. | 100 | 100 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS32130 | | LysR substrate-binding domain-containing protein | insig. | 50 | 93 |
| o | Paraburkholderia graminis OAS925 | ABIE53_004026 | | LysR family transcriptional regulator of gallate degradation | insig. | 50 | 93 |
| o | Ralstonia solanacearum PSI07 | RPSI07_RS06330 | | LysR family transcriptional regulator | insig. | 51 | 93 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01375 | | LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway | sig. | 51 | 93 |
| o | Pseudomonas sp. BP01 | JOY50_RS13535 | | LysR family transcriptional regulator | insig. | 48 | 94 |
| o | Rahnella sp. WP5 | EX31_RS10195 | | LysR family transcriptional regulator | insig. | 48 | 93 |
| o | Pseudomonas putida KT2440 | PP_2516 | | HTH-type transcriptional regulator GalR | insig. | 47 | 94 |
| o | Erwinia amylovora T8 | OLJFJH_13360 | | LysR family transcriptional regulator | insig. | 47 | 95 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4201 | | Transcriptional regulator, LysR family | insig. | 47 | 95 |
| o | Klebsiella michiganensis M5al | BWI76_RS14195 | | LysR family transcriptional regulator | insig. | 46 | 94 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_08390 | | LysR family transcriptional regulator | insig. | 46 | 95 |
| o | Azospirillum brasilense Sp245 | AZOBR_RS28155 | | transcriptional regulator LysR family protein | no data | 40 | 90 |
| o | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.5117.1 | | Transcriptional regulator, LysR family | insig. | 35 | 92 |
| o | Sinorhizobium meliloti 1021 | SMc00504 | | transcriptional regulator | insig. | 31 | 95 |
| o | Sphingomonas koreensis DSMZ 15582 | Ga0059261_0525 | | Transcriptional regulator | insig. | 34 | 93 |
| | Paraburkholderia graminis OAS925 | ABIE53_005759 | | LysR family transcriptional regulator of gallate degradation | insig. | 32 | 88 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF270 | | Transcriptional regulator, LysR family | insig. | 37 | 71 |
| | Variovorax sp. SCN45 | GFF4149 | | hypothetical protein | insig. | 32 | 70 |
| o | Sphingobium sp. HT1-2 | GFF2870 | | hypothetical protein | insig. | 33 | 94 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS19660 | | LysR substrate-binding domain-containing protein | insig. | 29 | 92 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1494 | | Transcriptional regulator, LysR family | insig. | 33 | 92 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02950 | | DNA-binding transcriptional regulator, LysR family | insig. | 32 | 69 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02334 | | DNA-binding transcriptional regulator, LysR family | insig. | 32 | 71 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS28500 | | LysR family transcriptional regulator | no data | 32 | 68 |
| | Paraburkholderia graminis OAS925 | ABIE53_000319 | | DNA-binding transcriptional LysR family regulator | sig. | 31 | 68 |
| o | Variovorax sp. OAS795 | ABID97_RS18890 | | LysR family transcriptional regulator | no data | 32 | 90 |
| | Variovorax sp. OAS795 | ABID97_RS01380 | | LysR substrate-binding domain-containing protein | insig. | 33 | 67 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS30525 | | LysR family transcriptional regulator | strong | 34 | 59 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS19705 | | LysR family transcriptional regulator | strong | 30 | 68 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS17285 | | LysR family transcriptional regulator | strong | 35 | 52 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_10765 | | LysR family transcriptional regulator | sig. | 35 | 52 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS39525 | | LysR family transcriptional regulator | strong | 35 | 52 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS26875 | | LysR family transcriptional regulator | insig. | 30 | 68 |
| | Escherichia coli ECRC100 | OKFHMN_23585 | lysR | transcriptional regulator | insig. | 29 | 66 |
| | Escherichia coli ECRC101 | MCAODC_14635 | lysR | transcriptional regulator | insig. | 29 | 66 |
| | Escherichia coli ECRC102 | NIAGMN_21350 | lysR | transcriptional regulator | insig. | 29 | 66 |
| | Escherichia coli ECRC98 | JDDGAC_27540 | lysR | transcriptional regulator | insig. | 29 | 66 |
| | Escherichia coli ECRC99 | KEDOAH_04600 | lysR | transcriptional regulator | no data | 29 | 66 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1529 | | Putative transcriptional regulator | insig. | 32 | 64 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS05215 | | LysR family transcriptional regulator | strong | 30 | 72 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_861 | | Transcriptional regulator, LysR family | insig. | 30 | 65 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3376 | | Transcriptional regulator, LysR family | insig. | 34 | 64 |
| | Pseudomonas putida KT2440 | PP_2833 | | Transcriptional regulator, LysR family | insig. | 30 | 70 |
| | Escherichia coli ECRC62 | BNILDI_14075 | lysR | transcriptional regulator | cofit | 28 | 66 |
| | Variovorax sp. OAS795 | ABID97_RS09990 | | LysR family transcriptional regulator | insig. | 31 | 65 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_613 | | Galactose-binding protein regulator | strong | 29 | 71 |
| | Variovorax sp. SCN45 | GFF5271 | | Transcriptional regulator, LysR family | insig. | 33 | 62 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS05310 | | LysR substrate-binding domain-containing protein | sig. | 33 | 56 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_12125 | | LysR family transcriptional regulator | insig. | 33 | 56 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS55435 | | LysR substrate-binding domain-containing protein | insig. | 33 | 56 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS31025 | | LysR family transcriptional regulator | insig. | 29 | 71 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_27455 | | LysR family transcriptional regulator | insig. | 29 | 65 |
| | Pseudomonas sp. BP01 | JOY50_RS05600 | | LysR family transcriptional regulator | insig. | 30 | 70 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS12630 | | LysR family transcriptional regulator | strong | 30 | 68 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS03730 | | LysR substrate-binding domain-containing protein | insig. | 30 | 60 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS04085 | | LysR family transcriptional regulator | insig. | 30 | 70 |
| | Pseudomonas segetis P6 | ACVTMO_RS02055 | | LysR family transcriptional regulator | insig. | 28 | 70 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS00725 | | LysR family transcriptional regulator | strong | 32 | 65 |
| | Pseudomonas sp. BP01 | JOY50_RS02790 | | LysR family transcriptional regulator | insig. | 30 | 68 |
| | Sinorhizobium meliloti 1021 | SM_b20580 | | LysR family transcriptional regulator | insig. | 31 | 70 |
| | Variovorax sp. SCN45 | GFF5191 | | Galactose-binding protein regulator | insig. | 30 | 71 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3798 | | Putative transcriptional regulator | insig. | 29 | 67 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05435 | | DNA-binding transcriptional regulator, LysR family | sig. | 31 | 63 |
| | Pseudomonas putida KT2440 | PP_2649 | | Transcriptional regulator, LysR family | insig. | 29 | 68 |
| | Paraburkholderia graminis OAS925 | ABIE53_005694 | | DNA-binding transcriptional LysR family regulator | strong | 30 | 63 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01226 | | transcriptional regulator, LysR family | no data | 30 | 63 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS28230 | | LysR family transcriptional regulator | no data | 29 | 64 |
| | Rhizobium sp. OAE497 | ABIE40_RS19620 | | pca operon transcription factor PcaQ | strong | 28 | 70 |
| | Variovorax sp. OAS795 | ABID97_RS24610 | | LysR family transcriptional regulator | insig. | 30 | 64 |
| | Variovorax sp. OAS795 | ABID97_RS06825 | | LysR family transcriptional regulator | insig. | 29 | 71 |
| | Serratia liquefaciens MT49 | IAI46_05785 | | LysR family transcriptional regulator | insig. | 28 | 71 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS33725 | | LysR family transcriptional regulator | no data | 28 | 70 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS14825 | | pca operon transcription factor PcaQ | insig. | 31 | 71 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS31320 | | LysR substrate-binding domain-containing protein | insig. | 31 | 58 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS05115 | | LysR family transcriptional regulator | insig. | 30 | 62 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3077.1 | | Galactose-binding protein regulator | insig. | 32 | 68 |
| | Variovorax sp. SCN45 | GFF4231 | | no description | insig. | 30 | 58 |
| | Variovorax sp. SCN45 | GFF7391 | | hypothetical protein | insig. | 30 | 63 |
| | Variovorax sp. SCN45 | GFF4669 | | Pca operon transcriptional activator PcaQ | no data | 33 | 70 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5613 | | Hydrogen peroxide-inducible genes activator | insig. | 31 | 71 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS33955 | | LysR family transcriptional regulator | insig. | 29 | 69 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3111 | | transcriptional regulator, LysR family | insig. | 28 | 72 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3111 | | transcriptional regulator, LysR family | insig. | 28 | 72 |
| | Klebsiella michiganensis M5al | BWI76_RS19595 | | hypothetical protein | insig. | 27 | 68 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1666 | | Transcriptional regulator, LysR family | strong | 28 | 67 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_29025 | | LysR family transcriptional regulator | insig. | 32 | 56 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS32975 | | LysR family transcriptional regulator | insig. | 27 | 69 |
| | Pseudomonas sp. BP01 | JOY50_RS12385 | | LysR family transcriptional regulator | insig. | 28 | 64 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS10750 | | LysR family transcriptional regulator | insig. | 27 | 72 |
| | Xanthobacter sp. DMC5 | GFF2143 | | HTH-type transcriptional regulator GbpR | insig. | 27 | 71 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS31295 | | LysR substrate-binding domain-containing protein | insig. | 31 | 49 |
| | Azospirillum brasilense Sp245 | AZOBR_RS31235 | | transcriptional regulator | insig. | 28 | 62 |
| | Pseudomonas segetis P6 | ACVTMO_RS20270 | | LysR family transcriptional regulator | insig. | 29 | 61 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1153 | | Transcriptional regulator, LysR family | insig. | 30 | 66 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS34435 | | LysR substrate-binding domain-containing protein | insig. | 30 | 53 |
| | Rahnella sp. WP5 | EX31_RS00040 | | LysR family transcriptional regulator | insig. | 30 | 69 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS05775 | | LysR family transcriptional regulator | insig. | 30 | 63 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS07230 | | LysR family transcriptional regulator | insig. | 28 | 70 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_28750 | | LysR family transcriptional regulator | no data | 27 | 67 |